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VY1

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N25C24sing1.38Å1.37Å
N23C24doub1.33Å1.40ÅAromatic
N23C22sing1.32Å1.34ÅAromatic
C24N26sing1.33Å1.39ÅAromatic
C22C21doub1.40Å1.40ÅAromatic
N26C27doub1.32Å1.34ÅAromatic
C21C27sing1.40Å1.40ÅAromatic
C21C20sing1.48Å1.45Å
C14C15sing1.51Å1.48Å
C14C13sing1.55Å1.55Å
C20C15doub1.39Å1.38ÅAromatic
C20N19sing1.34Å1.37ÅAromatic
C15C16sing1.39Å1.42ÅAromatic
C13N12sing1.48Å1.50Å
N19C18doub1.32Å1.38ÅAromatic
C16N12sing1.39Å1.42Å
C16N17doub1.33Å1.35ÅAromatic
C18N28sing1.38Å1.39Å
C18N17sing1.32Å1.40ÅAromatic
C32C33sing1.53Å1.54Å
C32O31sing1.43Å1.40Å
N12C9sing1.47Å1.48Å
C33N28sing1.47Å1.48Å
C9C8sing1.55Å1.54Å
C9C11sing1.55Å1.55Å
N28C29sing1.47Å1.48Å
C8C7sing1.54Å1.53Å
O31C30sing1.43Å1.40Å
C30C29sing1.53Å1.54Å
C7N6sing1.47Å1.48Å
C11N6sing1.47Å1.48Å
N2C1sing1.46Å1.46Å
N2S3sing1.66Å1.65Å
N6S3sing1.66Å1.68Å
S3O5doub1.42Å1.42Å
S3O4doub1.42Å1.42Å
C22H48sing1.08Å1.08Å
C27H51sing1.08Å1.08Å
C14H47sing1.09Å1.10Å
C14H46sing1.09Å1.10Å
C8H40sing1.09Å1.10Å
C8H41sing1.09Å1.10Å
C13H45sing1.09Å1.10Å
C13H44sing1.09Å1.10Å
C7H39sing1.09Å1.10Å
C7H38sing1.09Å1.10Å
C29H52sing1.09Å1.10Å
C29H53sing1.09Å1.10Å
C33H59sing1.09Å1.10Å
C33H58sing1.09Å1.10Å
C11H43sing1.09Å1.10Å
C11H42sing1.09Å1.10Å
C30H54sing1.09Å1.10Å
C30H55sing1.09Å1.10Å
C32H57sing1.09Å1.10Å
C32H56sing1.09Å1.10Å
C9H10sing1.09Å1.10Å
C1H36sing1.09Å1.10Å
C1H34sing1.09Å1.10Å
C1H35sing1.09Å1.10Å
N25H49sing0.97Å1.00Å
N25H50sing0.97Å1.00Å
N2H37sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
N25C24N23117.1°119.1°
N25C24N26116.8°119.1°
C24N25H49109.5°120.1°
C24N25H50109.5°119.9°
C24N23C22115.1°120.9°
N23C24N26126.1°121.8°
N23C22C21123.2°119.1°
N23C22H48118.4°120.4°
C24N26C27114.9°120.9°
C22C21C27117.3°118.3°
C22C21C20121.3°120.9°
C21C22H48118.4°120.5°
N26C27C21123.4°119.1°
N26C27H51118.3°120.5°
C27C21C20121.4°120.9°
C21C27H51118.3°120.4°
C21C20C15122.0°120.6°
C21C20N19116.1°120.6°
C15C14C13103.0°102.6°
C14C15C20132.2°132.7°
C14C15C16110.3°108.0°
C15C14H47111.1°110.8°
C15C14H46111.1°110.8°
C14C13N12106.1°102.7°
C13C14H47111.0°110.8°
C13C14H46111.1°110.8°
C14C13H45110.3°110.8°
C14C13H44110.3°110.8°
C15C20N19121.9°118.8°
C20C15C16117.5°119.3°
C20N19C18116.1°120.5°
C15C16N12110.6°111.1°
C15C16N17124.8°118.3°
C13N12C16106.1°108.1°
C13N12C9117.0°111.0°
N12C13H45110.3°110.8°
N12C13H44110.3°110.8°
N19C18N28116.3°118.9°
N19C18N17127.0°122.2°
N12C16N17124.5°130.6°
C16N12C9116.8°111.0°
C16N17C18112.7°120.9°
N28C18N17116.6°118.9°
C18N28C33120.3°111.0°
C18N28C29120.7°111.0°
C33C32O31111.1°109.3°
C32C33N28107.6°109.2°
C32C33H59110.0°109.6°
C32C33H58109.9°109.5°
C33C32H57109.1°109.5°
C33C32H56109.1°109.5°
C32O31C30112.8°113.8°
O31C32H57109.0°109.5°
O31C32H56109.1°109.4°
N12C9C8111.2°111.0°
N12C9C11110.0°111.0°
N12C9H10110.9°110.9°
C33N28C29113.0°110.8°
N28C33H59109.9°109.6°
N28C33H58109.9°109.5°
C8C9C11104.8°101.6°
C9C8C7103.6°102.9°
C9C8H40110.9°110.7°
C9C8H41110.9°110.9°
C8C9H10110.0°111.1°
C9C11N6106.6°104.8°
C9C11H43110.2°110.3°
C9C11H42110.2°110.5°
C11C9H10109.8°111.0°
N28C29C30107.7°109.3°
N28C29H52109.9°109.5°
N28C29H53109.9°109.6°
C8C7N6105.2°107.3°
C7C8H40110.9°110.7°
C7C8H41110.9°110.8°
C8C7H39110.6°109.8°
C8C7H38110.5°109.9°
O31C30C29110.9°109.3°
O31C30H54109.1°109.5°
O31C30H55109.1°109.6°
C30C29H52109.9°109.4°
C30C29H53109.9°109.5°
C29C30H54109.1°109.4°
C29C30H55109.1°109.5°
C7N6C11108.8°108.7°
C7N6S3117.5°125.6°
N6C7H39110.5°109.9°
N6C7H38110.5°109.9°
C11N6S3119.4°125.6°
N6C11H43110.2°110.4°
N6C11H42110.2°110.4°
C1N2S3124.2°120.0°
N2C1H36109.5°109.5°
N2C1H34109.5°109.5°
N2C1H35109.5°109.5°
C1N2H37105.7°120.0°
N2S3N6104.6°107.2°
N2S3O5106.8°106.4°
N2S3O4108.0°106.4°
S3N2H37105.7°120.0°
N6S3O5106.5°106.4°
N6S3O4108.7°106.4°
O5S3O4121.0°123.2°
H47C14H46109.5°110.8°
H40C8H41109.5°110.6°
H45C13H44109.5°110.8°
H39C7H38109.5°110.0°
H52C29H53109.5°109.5°
H59C33H58109.5°109.5°
H43C11H42109.5°110.3°
H54C30H55109.5°109.5°
H57C32H56109.5°109.6°
H36C1H34109.5°109.5°
H36C1H35109.4°109.4°
H34C1H35109.5°109.4°
H49N25H50109.5°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
N25C24N23N26179.9°179.2°
N25C24N23C22179.3°179.7°
N25C24N26C27179.1°180.0°
C24N25H49H50120.0°180.0°
C24N23C22C210.9°0.0°
N23C24N26C271.0°0.8°
C24N23C22H48179.1°179.7°
N23C24N25H490.0°179.3°
N23C24N25H50120.0°0.7°
C22N23C24N260.8°0.5°
N23C22C21H48180.0°179.8°
N23C22C21C272.1°0.2°
N23C22C21C20179.4°179.7°
C24N26C27C210.3°0.5°
C24N26C27H51179.7°179.5°
N26C24N25H49179.9°0.0°
N26C24N25H5059.9°180.0°
C22C21C27N261.8°0.0°
C22C21C27C20178.5°180.0°
C22C21C20C15137.9°41.6°
C22C21C20N1941.6°138.4°
C22C21C27H51178.2°180.0°
N26C27C21H51180.0°180.0°
N26C27C21C20179.7°180.0°
C27C21C20C1543.7°138.4°
C27C21C20N19136.8°41.6°
C27C21C22H48177.9°180.0°
C21C20C15C142.8°0.7°
C21C20C15N19179.4°180.0°
C21C20C15C16179.4°179.8°
C21C20N19C18178.6°179.9°
C20C21C22H480.6°0.0°
C20C21C27H510.3°0.0°
C15C14C13H47118.9°118.3°
C15C14C13H46118.9°118.3°
C14C15C20C16177.8°179.5°
C14C15C20N19176.6°179.3°
C15C14C13N1215.9°25.2°
C14C15C16N126.6°0.9°
C14C15C16N17175.9°179.2°
C15C14H47H46123.0°123.4°
C15C14C13H45103.6°143.5°
C15C14C13H44135.3°93.1°
C13C14C15C20171.7°163.9°
C13C14C15C166.2°15.7°
C14C13N12H45119.5°118.3°
C14C13N12H44119.5°118.3°
C14C13N12C1620.2°27.1°
C14C13N12C9152.5°94.8°
C13C14H47H46123.0°123.4°
C14C13H45H44121.5°123.3°
C15C20N19C180.9°0.1°
C20C15C16N12175.2°179.5°
C20C15C16N172.3°0.4°
C20C15C14H4752.8°77.9°
C20C15C14H4669.3°45.6°
N19C20C15C161.1°0.2°
C20N19C18N28174.0°179.9°
C20N19C18N172.2°0.2°
C15C16N12C1316.9°18.3°
C15C16N12N17177.5°179.9°
C15C16N17C181.2°0.3°
C15C16N12C9149.4°103.6°
C16C15C14H47125.1°102.6°
C16C15C14H46112.8°134.0°
C13N12C16C9132.5°121.9°
C13N12C16N17165.7°161.8°
C13N12C9C845.7°61.4°
C13N12C9C11161.3°173.6°
N12C13C14H47134.8°93.1°
N12C13C14H46103.1°143.5°
N12C13H45H44121.5°123.4°
C13N12C9H1077.0°62.6°
N19C18N17C161.2°0.0°
N19C18N28N17176.6°179.9°
N19C18N28C3316.8°0.0°
N19C18N28C29167.7°123.7°
N12C16N17C18175.9°179.6°
C16N12C9C8173.0°178.4°
C16N12C9C1171.5°66.2°
C16N12C13H4599.3°145.4°
C16N12C13H44139.6°91.2°
C16N12C9H1050.3°57.6°
C16N17C18N28175.0°179.9°
N17C16N12C933.2°76.3°
C18N28C33C32151.2°177.7°
C18N28C33C29153.0°123.8°
C18N28C29C30151.1°177.6°
C18N28C29H5231.4°62.5°
C18N28C29H5389.2°57.6°
C18N28C33H5931.4°57.7°
C18N28C33H5889.1°62.4°
N17C18N28C33166.6°180.0°
N17C18N28C2915.7°56.4°
C33C32O31H57120.2°119.9°
C33C32O31H56120.3°119.9°
C32C33N28H59119.7°120.0°
C32C33N28H58119.7°119.9°
C32C33N28C2955.8°58.6°
C33C32O31C3060.1°58.6°
C32C33H59H58120.8°120.1°
C33C32H57H56119.3°120.1°
O31C32C33N2855.8°56.8°
C32O31C30C2960.2°58.6°
O31C32C33H59175.5°176.8°
O31C32C33H5863.9°63.1°
C32O31C30H54179.6°61.3°
C32O31C30H5560.0°178.6°
O31C32H57H56119.2°120.1°
N12C9C8C11118.8°118.1°
N12C9C8H10123.2°123.9°
N12C9C11H10122.4°123.8°
N12C9C8C7147.4°153.5°
N12C9C11N6133.0°155.1°
N12C9C8H4093.6°35.2°
N12C9C8H4128.4°88.0°
C9N12C13H4533.0°23.5°
C9N12C13H4488.0°146.9°
N12C9C11H4313.4°36.2°
N12C9C11H42107.5°86.0°
C33N28C29C3056.0°58.6°
C33N28C29H52175.7°61.3°
C33N28C29H5363.7°178.6°
N28C33H59H58120.8°120.1°
N28C33C32H57176.0°176.8°
N28C33C32H5664.5°63.1°
C8C9C11H10118.1°118.1°
C9C8C7H40119.0°118.3°
C9C8C7H41119.1°118.5°
C9C8C7N633.7°22.2°
C8C9C11N613.4°37.0°
C9C8H40H41122.7°123.3°
C9C8C7H3985.6°97.2°
C9C8C7H38153.1°141.6°
C8C9C11H43106.2°81.8°
C8C9C11H42133.0°155.9°
C11C9C8C728.6°35.5°
C9C11N6C77.8°24.1°
C9C11N6H43119.5°118.8°
C9C11N6H42119.6°119.0°
C9C11N6S3146.6°155.8°
C11C9C8H40147.7°82.9°
C11C9C8H4190.4°154.0°
C9C11H43H42121.3°122.3°
N28C29C30O3156.1°56.8°
N28C29C30H52119.7°119.9°
N28C29C30H53119.7°120.0°
N28C29H52H53120.8°120.2°
C29N28C33H59175.6°178.6°
C29N28C33H5863.9°61.3°
N28C29C30H54176.3°63.1°
N28C29C30H5564.2°176.8°
C8C7N6H39119.3°119.4°
C8C7N6H38119.3°119.4°
C8C7N6C1126.2°1.1°
C8C7N6S3165.8°178.9°
C7C8H40H41122.7°123.2°
C8C7H39H38122.0°121.1°
C7C8C9H1089.4°82.6°
O31C30C29H54120.2°119.9°
O31C30C29H55120.2°120.1°
O31C30C29H52175.8°63.2°
O31C30C29H5363.6°176.8°
O31C30H54H55119.4°120.1°
C30O31C32H57179.6°178.5°
C30O31C32H5660.1°61.3°
C30C29H52H53120.8°120.0°
C29C30H54H55119.3°120.1°
C7N6C11S3138.8°179.9°
C7N6S3N276.1°90.0°
C7N6S3O536.8°23.5°
C7N6S3O4168.8°156.5°
N6C7C8H40152.8°96.1°
N6C7C8H4185.3°140.7°
N6C7H39H38122.0°121.2°
C7N6C11H43127.3°94.7°
C7N6C11H42111.8°143.1°
C11N6S3N259.2°90.0°
C11N6S3O5172.1°156.4°
C11N6S3O456.0°23.5°
C11N6C7H3993.2°120.4°
C11N6C7H38145.5°118.4°
N6C11H43H42121.3°122.3°
N6C11C9H10104.7°81.2°
C1N2S3H37122.0°179.9°
C1N2S3N6108.2°65.0°
C1N2S3O5139.1°178.5°
C1N2S3O47.5°48.5°
N2C1H36H34120.0°120.0°
N2C1H36H35120.0°120.1°
N2C1H34H35120.0°120.0°
N2S3N6O5112.9°113.5°
N2S3N6O4115.2°113.5°
N2S3O5O4123.9°123.0°
S3N2C1H36180.0°60.0°
S3N2C1H3460.0°60.0°
S3N2C1H3560.0°180.0°
N6S3O5O4124.7°123.0°
S3N6C7H3946.5°59.5°
S3N6C7H3874.9°61.7°
S3N6C11H4393.9°85.4°
S3N6C11H4227.0°36.8°
N6S3N2H37129.7°115.0°
O5S3N2H3717.0°1.4°
O4S3N2H37114.6°131.5°
H47C14C13H4515.3°25.2°
H47C14C13H44105.7°148.6°
H46C14C13H45137.4°98.2°
H46C14C13H4416.4°25.2°
H40C8C7H3933.5°144.4°
H40C8C7H3887.9°23.3°
H40C8C9H1029.7°159.1°
H41C8C7H39155.4°21.3°
H41C8C7H3834.0°99.8°
H41C8C9H10151.6°35.9°
H52C29C30H5464.0°176.9°
H52C29C30H5555.6°56.9°
H53C29C30H5456.6°56.9°
H53C29C30H55176.1°63.1°
H59C33C32H5764.3°63.2°
H59C33C32H5655.2°56.9°
H58C33C32H5756.3°56.9°
H58C33C32H56175.8°177.0°
H43C11C9H10135.8°160.0°
H42C11C9H1014.9°37.8°
H36C1H34H35120.0°119.9°
H36C1N2H3758.0°119.9°
H34C1N2H3762.0°120.1°
H35C1N2H37178.0°0.1°

223532

PDB entries from 2024-08-07

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