Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

VXZ

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
OSdoub1.42Å1.44Å
O2Sdoub1.42Å1.47Å
SO1sing1.52Å1.45Å
SC3sing1.76Å1.77Å
C3C2doub1.39Å1.38ÅAromatic
C3C4sing1.38Å1.39ÅAromatic
C2C1sing1.38Å1.38ÅAromatic
C4C5doub1.40Å1.40ÅAromatic
C1Cdoub1.39Å1.40ÅAromatic
C5Csing1.40Å1.42ÅAromatic
C5C6sing1.47Å1.49Å
CNsing1.39Å1.38Å
C6O4doub1.22Å1.31Å
C6O3sing1.35Å1.22Å
C1H1sing1.08Å1.08Å
C4H2sing1.08Å1.08Å
O3H3sing0.97Å0.95Å
C2H4sing1.08Å1.08Å
NH5sing0.97Å1.00Å
NH6sing0.97Å1.00Å
O1H7sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
OSO2111.4°123.2°
OSO1114.2°106.4°
OSC3106.6°106.4°
O2SO1111.4°106.4°
O2SC3106.2°106.4°
O1SC3106.6°107.2°
SO1H7109.5°114.0°
SC3C2119.6°119.8°
SC3C4119.8°119.8°
C2C3C4120.6°120.4°
C3C2C1119.4°120.4°
C3C2H4120.3°119.8°
C3C4C5120.6°119.9°
C3C4H2119.7°120.0°
C2C1C121.7°120.1°
C2C1H1119.2°119.9°
C1C2H4120.3°119.8°
C4C5C119.4°119.5°
C4C5C6119.2°120.2°
C5C4H2119.7°120.1°
C1CC5118.3°119.6°
C1CN119.4°120.2°
CC1H1119.1°120.0°
CC5C6121.4°120.3°
C5CN122.3°120.1°
C5C6O4114.6°120.0°
C5C6O3122.0°120.0°
CNH5109.5°120.0°
CNH6109.4°120.1°
O4C6O3123.4°120.0°
C6O3H3109.5°117.1°
H5NH6109.5°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
OSO2O1128.7°122.9°
OSO2C3115.7°123.0°
OSO1C3117.4°113.6°
OSC3C253.7°23.6°
OSC3C4125.8°156.0°
OSO1H7127.2°66.5°
O2SO1C3115.3°113.5°
O2SC3C265.2°156.5°
O2SC3C4115.4°23.0°
O2SO1H70.0°66.4°
O1SC3C2176.0°90.0°
O1SC3C43.5°90.5°
SC3C2C4179.5°179.5°
SC3C2C1179.1°180.0°
SC3C4C5179.1°179.8°
SC3C4H20.8°0.3°
SC3C2H40.9°0.0°
C3SO1H7115.4°180.0°
C3C2C1H4180.0°179.9°
C2C3C4C50.3°0.7°
C3C2C1C0.0°0.1°
C3C2C1H1180.0°179.8°
C2C3C4H2179.7°179.8°
C4C3C2C10.3°0.4°
C3C4C5H2180.0°179.5°
C3C4C5C0.0°0.5°
C3C4C5C6179.9°179.5°
C4C3C2H4179.6°179.5°
C2C1CH1180.0°179.7°
C2C1CC50.3°0.3°
C2C1CN179.5°179.7°
C4C5CC10.3°0.0°
C4C5CC6179.9°180.0°
C4C5CN179.5°180.0°
C4C5C6O438.7°174.1°
C4C5C6O3141.5°6.0°
C1CC5N179.8°180.0°
C1CC5C6179.6°180.0°
CC1C2H4180.0°180.0°
C1CNH5180.0°5.6°
C1CNH660.0°174.4°
CC5C6O4141.2°5.9°
CC5C6O338.7°174.1°
C5CC1H1179.7°180.0°
CC5C4H2180.0°180.0°
C5CNH50.2°174.4°
C5CNH6120.2°5.6°
C6C5CN0.6°0.0°
C5C6O4O3179.9°180.0°
C6C5C4H20.1°0.0°
C5C6O3H3179.8°180.0°
NCC1H10.5°0.0°
CNH5H6120.0°180.0°
O4C6O3H30.0°0.0°
H1C1C2H40.0°0.3°

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon