Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

VXU

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C2C3sing1.38Å1.38ÅAromatic
C2C1doub1.38Å1.37ÅAromatic
C3C4doub1.38Å1.37ÅAromatic
C1C11sing1.38Å1.38ÅAromatic
C4C5sing1.38Å1.37ÅAromatic
C4C12sing1.51Å1.48Å
C11C5doub1.39Å1.37ÅAromatic
C11O10sing1.36Å1.38Å
C5O6sing1.36Å1.39Å
C8C9sing1.52Å1.51Å
C8C7sing1.52Å1.51Å
C9O10sing1.43Å1.43Å
C7O6sing1.43Å1.41Å
C12N13sing1.47Å1.46Å
C2H2sing1.08Å1.08Å
C3H3sing1.08Å1.08Å
C1H1sing1.08Å1.08Å
C12H121sing1.09Å1.10Å
C12H122sing1.09Å1.10Å
C8H81Csing1.09Å1.10Å
C8H82Csing1.09Å1.10Å
C9H91Csing1.09Å1.10Å
C9H92Csing1.09Å1.10Å
C7H71Csing1.09Å1.10Å
C7H72Csing1.09Å1.10Å
N13H131sing1.01Å1.00Å
N13H132sing1.01Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C3C2C1118.6°120.2°
C2C3C4120.3°120.2°
C3C2H2120.7°119.9°
C2C3H3119.9°119.9°
C2C1C11121.3°119.7°
C1C2H2120.7°119.9°
C2C1H1119.3°120.1°
C3C4C5121.1°119.7°
C3C4C12121.7°120.1°
C4C3H3119.9°119.8°
C1C11C5119.7°120.1°
C1C11O10117.9°120.3°
C11C1H1119.4°120.1°
C5C4C12117.2°120.1°
C4C5C11119.1°120.1°
C4C5O6114.7°120.3°
C4C12N13109.9°109.5°
C4C12H121109.4°109.5°
C4C12H122109.4°109.5°
C5C11O10122.4°119.6°
C11C5O6126.2°119.7°
C11O10C9105.3°115.9°
C5O6C7109.1°115.9°
C9C8C7107.3°112.3°
C8C9O10107.9°110.8°
C9C8H81C110.0°108.9°
C9C8H82C110.0°109.0°
C8C9H91C109.9°109.2°
C8C9H92C109.9°109.2°
C8C7O6105.2°110.8°
C7C8H81C110.0°108.9°
C7C8H82C110.0°108.8°
C8C7H71C110.5°109.2°
C8C7H72C110.5°109.2°
O10C9H91C109.8°109.3°
O10C9H92C109.8°109.2°
O6C7H71C110.5°109.2°
O6C7H72C110.5°109.2°
N13C12H121109.4°109.4°
N13C12H122109.4°109.5°
C12N13H131109.5°111.0°
C12N13H132109.5°111.0°
H121C12H122109.4°109.5°
H81CC8H82C109.5°108.8°
H91CC9H92C109.5°109.2°
H71CC7H72C109.5°109.2°
H131N13H132109.4°111.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C3C2C1H2180.0°179.7°
C2C3C4H3180.0°180.0°
C3C2C1C110.8°0.0°
C2C3C4C51.0°0.0°
C2C3C4C12179.4°180.0°
C3C2C1H1179.2°180.0°
C1C2C3C40.5°0.0°
C2C1C11H1180.0°179.9°
C2C1C11C51.7°0.0°
C2C1C11O10179.5°179.9°
C1C2C3H3179.5°180.0°
C3C4C5C12179.7°180.0°
C3C4C5C110.1°0.0°
C3C4C5O6179.8°179.9°
C3C4C12N1328.5°100.0°
C4C3C2H2179.5°179.7°
C3C4C12H121148.6°20.0°
C3C4C12H12291.6°140.0°
C1C11C5C41.2°0.0°
C1C11C5O10178.7°179.9°
C1C11C5O6178.5°179.9°
C1C11O10C9130.7°111.8°
C11C1C2H2179.2°179.7°
C4C5C11O6179.7°180.0°
C4C5C11O10179.9°180.0°
C4C5O6C7151.6°111.8°
C5C4C12N13151.2°80.0°
C5C4C3H3179.0°180.0°
C5C4C12H12131.1°160.1°
C5C4C12H12288.7°40.1°
C12C4C5C11179.8°179.9°
C12C4C5O60.5°0.1°
C4C12N13H121120.1°120.0°
C4C12N13H122120.1°120.0°
C12C4C3H30.7°0.0°
C4C12H121H122119.8°120.0°
C4C12N13H131180.0°56.0°
C4C12N13H13260.0°180.0°
C5C11O10C950.6°68.3°
C11C5O6C728.1°68.3°
C5C11C1H1178.3°180.0°
O10C11C5O60.2°0.0°
C11O10C9C896.7°84.5°
O10C11C1H10.5°0.1°
C11O10C9H91C143.6°35.9°
C11O10C9H92C23.1°155.3°
C5O6C7C891.1°84.4°
C5O6C7H71C149.6°155.3°
C5O6C7H72C28.2°36.0°
C9C8C7H81C119.7°120.8°
C9C8C7H82C119.6°120.7°
C8C9O10H91C119.7°120.4°
C8C9O10H92C119.7°120.3°
C9C8C7O662.7°64.8°
C9C8H81CH82C121.0°118.7°
C8C9H91CH92C120.7°119.3°
C9C8C7H71C177.9°174.9°
C9C8C7H72C56.6°55.6°
C7C8C9O1037.2°64.9°
C8C7O6H71C119.3°120.3°
C8C7O6H72C119.3°120.4°
C7C8H81CH82C121.0°118.5°
C7C8C9H91C157.0°55.5°
C7C8C9H92C82.5°174.8°
C8C7H71CH72C122.0°119.4°
O10C9C8H81C156.9°55.9°
O10C9C8H82C82.4°174.5°
O10C9H91CH92C120.7°119.4°
O6C7C8H81C56.9°55.9°
O6C7C8H82C177.6°174.4°
O6C7H71CH72C122.0°119.4°
N13C12H121H122119.8°120.0°
C12N13H131H132120.0°124.0°
H2C2C3H30.5°0.4°
H2C2C1H10.8°0.4°
H121C12N13H13160.0°64.0°
H121C12N13H132179.9°60.0°
H122C12N13H13159.9°176.1°
H122C12N13H13260.1°60.0°
H81CC8C9H91C83.4°176.2°
H81CC8C9H92C37.2°64.4°
H81CC8C7H71C62.4°64.4°
H81CC8C7H72C176.2°176.3°
H82CC8C9H91C37.3°65.1°
H82CC8C9H92C157.9°54.2°
H82CC8C7H71C58.3°54.1°
H82CC8C7H72C63.1°65.2°

225946

PDB entries from 2024-10-09

PDB statisticsPDBj update infoContact PDBjnumon