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VXD

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1C2sing1.51Å1.50Å
C2C3doub1.38Å1.39ÅAromatic
C3C4sing1.38Å1.38ÅAromatic
C4C5doub1.38Å1.38ÅAromatic
C5C6sing1.38Å1.38ÅAromatic
C6C7doub1.39Å1.39ÅAromatic
C7N1sing1.40Å1.42Å
N1C8sing1.35Å1.34Å
C8O1doub1.21Å1.23Å
C8C9sing1.51Å1.51Å
C9N2sing1.47Å1.48Å
C2C7sing1.39Å1.40ÅAromatic
N1H7sing0.97Å1.00Å
C4H4sing1.08Å1.08Å
C5H5sing1.08Å1.08Å
C6H6sing1.08Å1.08Å
C1H3sing1.09Å1.10Å
C1H2sing1.09Å1.10Å
C1H1sing1.09Å1.10Å
C9H9sing1.09Å1.10Å
C9H8sing1.09Å1.10Å
N2H11sing1.01Å1.00Å
N2H12sing1.01Å1.00Å
CL1C3sing1.74Å1.74Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C1C2C3121.1°120.0°
C1C2C7121.2°120.0°
C2C1H3109.5°109.5°
C2C1H2109.5°109.4°
C2C1H1109.5°109.5°
C2C3C4122.0°120.0°
C3C2C7117.7°120.0°
C2C3CL1119.9°120.0°
C3C4C5119.2°120.1°
C3C4H4120.4°120.0°
C4C3CL1118.0°120.0°
C4C5C6120.5°120.1°
C5C4H4120.4°119.9°
C4C5H5119.7°119.9°
C5C6C7119.9°119.9°
C6C5H5119.7°120.0°
C5C6H6120.1°120.0°
C6C7N1120.6°120.1°
C6C7C2120.6°119.8°
C7C6H6120.0°120.0°
C7N1C8128.5°120.0°
N1C7C2118.8°120.1°
C7N1H7115.7°120.0°
N1C8O1124.1°120.0°
N1C8C9114.9°120.0°
C8N1H7115.8°120.0°
O1C8C9120.9°120.0°
C8C9N2109.1°109.5°
C8C9H9109.6°109.5°
C8C9H8109.6°109.4°
N2C9H9109.6°109.5°
N2C9H8109.6°109.5°
C9N2H11109.5°111.0°
C9N2H12109.5°111.0°
H3C1H2109.5°109.5°
H3C1H1109.5°109.4°
H2C1H1109.5°109.5°
H9C9H8109.5°109.5°
H11N2H12109.4°111.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C1C2C3C7179.5°179.5°
C1C2C3C4179.8°180.0°
C1C2C7C6179.3°179.7°
C1C2C7N11.2°0.3°
C2C1H3H2120.0°120.0°
C2C1H3H1120.0°120.0°
C2C1H2H1120.0°120.0°
C1C2C3CL10.4°0.0°
C2C3C4CL1179.8°179.9°
C2C3C4C50.0°0.5°
C3C2C7C61.2°0.3°
C3C2C7N1179.3°179.8°
C2C3C4H4180.0°179.8°
C3C2C1H390.3°90.0°
C3C2C1H2149.7°150.0°
C3C2C1H129.8°30.0°
C3C4C5H4180.0°179.7°
C3C4C5C60.1°0.3°
C4C3C2C70.7°0.5°
C3C4C5H5179.9°179.7°
C4C5C6H5180.0°180.0°
C4C5C6C70.5°0.0°
C4C5C6H6179.5°180.0°
C5C4C3CL1179.7°179.4°
C5C6C7H6180.0°180.0°
C5C6C7N1179.2°180.0°
C5C6C7C21.1°0.0°
C6C5C4H4179.9°180.0°
C6C7N1C2178.0°180.0°
C6C7N1C856.8°34.8°
C6C7N1H7123.3°145.5°
C7C6C5H5179.5°180.0°
C7N1C8H7180.0°179.7°
C7N1C8O1127.4°4.8°
C7N1C8C954.0°175.2°
N1C7C6H60.8°0.0°
N1C8O1C9178.4°180.0°
N1C8C9N2149.4°180.0°
C8N1C7C2125.2°145.2°
N1C8C9H990.7°60.0°
N1C8C9H829.4°60.0°
O1C8C9N229.2°0.0°
O1C8N1H752.6°175.5°
O1C8C9H990.7°120.0°
O1C8C9H8149.2°120.0°
C8C9N2H9119.9°120.0°
C8C9N2H8120.0°120.0°
C9C8N1H7125.9°4.5°
C8C9H9H8120.2°120.0°
C8C9N2H11180.0°56.1°
C8C9N2H1260.0°180.0°
N2C9H9H8120.2°120.0°
C9N2H11H12120.0°123.9°
C2C7N1H754.8°34.5°
C2C7C6H6178.8°180.0°
C7C2C1H390.2°90.6°
C7C2C1H229.8°29.4°
C7C2C1H1149.8°149.5°
C7C2C3CL1179.1°179.4°
H4C4C5H50.1°0.0°
H4C4C3CL10.3°0.3°
H5C5C6H60.5°0.1°
H3C1H2H1120.0°120.0°
H9C9N2H1160.1°63.9°
H9C9N2H12180.0°60.1°
H8C9N2H1160.0°176.0°
H8C9N2H1259.9°60.0°

249697

PDB entries from 2026-02-25

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