Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

VWM

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1C2sing1.51Å1.50Å
C2O1doub1.21Å1.23Å
C2N1sing1.35Å1.36Å
N1C3sing1.47Å1.48Å
C3C4sing1.53Å1.52Å
C4C5sing1.53Å1.52Å
C5C6sing1.53Å1.54Å
C6O2sing1.43Å1.44Å
C6C7sing1.53Å1.54Å
C6C8sing1.51Å1.53Å
C8O3doub1.21Å1.21Å
C8O4sing1.34Å1.21Å
N1C7sing1.47Å1.46Å
C4H7sing1.09Å1.10Å
C4H6sing1.09Å1.10Å
C5H9sing1.09Å1.10Å
C5H8sing1.09Å1.10Å
C7H12sing1.09Å1.10Å
C7H11sing1.09Å1.10Å
C1H2sing1.09Å1.10Å
C1H1sing1.09Å1.10Å
C1H3sing1.09Å1.10Å
C3H4sing1.09Å1.10Å
C3H5sing1.09Å1.10Å
O2H10sing0.97Å0.95Å
O4H13sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C1C2O1119.2°120.0°
C1C2N1119.5°120.0°
C2C1H2109.5°109.4°
C2C1H1109.5°109.4°
C2C1H3109.4°109.5°
O1C2N1121.3°120.0°
C2N1C3127.7°120.6°
C2N1C7121.0°120.7°
N1C3C4111.7°108.8°
C3N1C7110.9°118.7°
N1C3H4108.9°109.6°
N1C3H5108.9°109.6°
C3C4C5110.7°109.3°
C3C4H7109.2°109.5°
C3C4H6109.2°109.5°
C4C3H4108.9°109.6°
C4C3H5108.9°109.6°
C4C5C6112.1°109.5°
C5C4H7109.2°109.6°
C5C4H6109.2°109.5°
C4C5H9108.8°109.5°
C4C5H8108.8°109.4°
C5C6O2111.4°109.5°
C5C6C7109.8°109.3°
C5C6C8111.4°109.5°
C6C5H9108.8°109.5°
C6C5H8108.8°109.4°
O2C6C7105.6°109.5°
O2C6C8105.9°109.5°
C6O2H10109.5°114.0°
C7C6C8112.5°109.6°
C6C7N1109.5°108.8°
C6C7H12109.5°109.6°
C6C7H11109.5°109.6°
C6C8O3121.8°120.0°
C6C8O4117.5°120.0°
O3C8O4120.6°120.0°
C8O4H13109.5°117.0°
N1C7H12109.5°109.6°
N1C7H11109.5°109.6°
H7C4H6109.5°109.5°
H9C5H8109.5°109.5°
H12C7H11109.5°109.7°
H2C1H1109.5°109.4°
H2C1H3109.4°109.5°
H1C1H3109.5°109.5°
H4C3H5109.5°109.7°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C1C2O1N1179.8°180.0°
C1C2N1C30.2°0.0°
C1C2N1C7172.4°179.7°
C2C1H2H1120.0°119.9°
C2C1H2H3120.0°120.0°
C2C1H1H3120.0°120.0°
O1C2N1C3179.5°180.0°
O1C2N1C77.4°0.3°
O1C2C1H20.0°0.0°
O1C2C1H1120.0°119.9°
O1C2C1H3120.0°120.0°
C2N1C3C7172.8°179.7°
C2N1C3C4126.3°126.1°
C2N1C7C6124.1°126.1°
C2N1C7H12115.9°6.3°
C2N1C7H114.1°114.1°
N1C2C1H2179.7°180.0°
N1C2C1H160.2°60.1°
N1C2C1H359.8°60.0°
C2N1C3H4113.4°114.1°
C2N1C3H56.0°6.3°
N1C3C4H4120.3°119.8°
N1C3C4H5120.3°119.8°
N1C3C4C553.8°54.7°
C3N1C7C662.5°53.6°
N1C3C4H7174.0°65.4°
N1C3C4H666.3°174.6°
C3N1C7H1257.5°173.4°
C3N1C7H11177.5°66.2°
N1C3H4H5119.0°120.4°
C3C4C5H7120.2°120.0°
C3C4C5H6120.2°119.9°
C3C4C5C650.3°61.4°
C4C3N1C760.9°53.6°
C3C4H7H6119.4°120.0°
C3C4C5H970.1°58.6°
C3C4C5H8170.7°178.6°
C4C3H4H5119.0°120.4°
C4C5C6H9120.4°120.0°
C4C5C6H8120.4°120.0°
C4C5C6O264.0°58.5°
C4C5C6C752.6°61.4°
C4C5C6C8177.9°178.6°
C5C4H7H6119.4°120.1°
C4C5H9H8118.8°120.0°
C5C4C3H466.5°65.1°
C5C4C3H5174.2°174.5°
C5C6O2C7119.2°119.8°
C5C6O2C8121.3°120.1°
C5C6C7C8124.7°120.0°
C5C6C8O332.9°25.0°
C5C6C8O4145.5°155.0°
C5C6C7N157.9°54.6°
C6C5C4H7170.5°58.6°
C6C5C4H669.8°178.7°
C6C5H9H8118.7°120.0°
C5C6C7H1262.1°174.5°
C5C6C7H11177.9°65.2°
C5C6O2H10180.0°180.0°
O2C6C7C8115.1°120.1°
O2C6C8O3154.1°145.0°
O2C6C8O424.2°35.0°
O2C6C7N162.3°65.3°
O2C6C5H9175.5°178.6°
O2C6C5H856.3°61.4°
O2C6C7H12177.7°54.5°
O2C6C7H1157.7°174.9°
C7C6C8O391.0°94.8°
C7C6C8O490.7°85.1°
C6C7N1H12120.0°119.8°
C6C7N1H11120.0°119.8°
C7C6C5H967.9°58.7°
C7C6C5H8173.0°178.7°
C6C7H12H11120.0°120.3°
C7C6O2H1060.9°60.2°
C6C8O3O4178.3°180.0°
C8C6C7N1177.4°174.6°
C8C6C5H957.5°61.4°
C8C6C5H861.7°58.7°
C8C6C7H1262.6°65.6°
C8C6C7H1157.4°54.8°
C8C6O2H1058.7°60.0°
C6C8O4H13178.3°180.0°
O3C8O4H130.0°0.0°
N1C7H12H11120.0°120.4°
C7N1C3H459.4°66.2°
C7N1C3H5178.8°173.4°
H7C4C5H950.1°178.6°
H7C4C5H869.1°61.4°
H7C4C3H453.7°174.9°
H7C4C3H565.6°54.4°
H6C4C5H9169.7°61.3°
H6C4C5H850.5°58.7°
H6C4C3H4173.4°54.8°
H6C4C3H554.0°65.6°
H2C1H1H3120.0°120.0°

248636

PDB entries from 2026-02-04

PDB statisticsPDBj update infoContact PDBjnumon