Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

VVU

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C2C1sing1.54Å1.51Å
C1O1sing1.40Å1.25Å
C1O2sing1.41Å1.24Å
C4C3sing1.54Å1.55Å
O1RH1sing1.80Å2.02Å
O2RH2sing1.81Å2.00Å
C3O7sing1.42Å1.23Å
C3O8sing1.39Å1.22Å
O7RH1sing1.81Å2.05Å
O8RH2sing1.80Å2.07Å
RH1RH2sing2.35Å2.38Å
RH1O0sing1.81Å2.06Å
RH1O3sing1.80Å2.07Å
RH2O9sing1.80Å2.08Å
RH2O4sing1.80Å2.03Å
O0C5sing1.42Å1.23Å
C5O9sing1.40Å1.22Å
C5C6sing1.54Å1.54Å
O3C7sing1.39Å1.24Å
O4C7sing1.42Å1.25Å
C7C8sing1.54Å1.54Å
C1H1sing1.11Å1.10Å
C2H2sing1.09Å1.10Å
C2H3sing1.09Å1.10Å
C2H4sing1.09Å1.10Å
C3H5sing1.11Å1.10Å
C4H6sing1.09Å1.10Å
C4H7sing1.09Å1.10Å
C4H8sing1.09Å1.10Å
C5H9sing1.11Å1.10Å
C6H10sing1.09Å1.10Å
C6H11sing1.09Å1.10Å
C6H12sing1.09Å1.10Å
C7H13sing1.12Å1.10Å
C8H14sing1.09Å1.10Å
C8H15sing1.09Å1.10Å
C8H16sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2C1O1119.9°108.1°
C2C1O2120.7°108.2°
C2C1H190.1°106.3°
C1C2H2109.5°109.4°
C1C2H3109.5°109.4°
C1C2H4109.5°109.5°
O1C1O2119.4°121.9°
C1O1RH1122.9°115.1°
O1C1H190.1°105.5°
C1O2RH2124.1°109.5°
O2C1H190.1°105.8°
C4C3O7115.5°107.6°
C4C3O8116.6°107.6°
C4C3H591.9°106.1°
C3C4H6109.5°109.4°
C3C4H7109.5°109.4°
C3C4H8109.4°109.5°
O1RH1O787.2°86.5°
O1RH1RH286.6°83.8°
O1RH1O088.8°89.6°
O1RH1O3175.7°168.8°
O2RH2O889.0°90.1°
O2RH2RH186.8°92.8°
O2RH2O987.9°90.9°
O2RH2O4173.0°174.6°
O7C3O8127.5°122.9°
C3O7RH1119.6°108.2°
O7C3H592.3°105.8°
C3O8RH2117.7°117.6°
O8C3H592.3°105.7°
O7RH1RH286.8°92.2°
O7RH1O0174.8°172.8°
O7RH1O392.7°90.0°
O8RH2RH188.1°86.1°
O8RH2O9175.3°168.2°
O8RH2O492.3°89.2°
RH2RH1O089.5°93.5°
RH2RH1O389.1°85.6°
RH1RH2O988.2°82.1°
RH1RH2O486.3°92.5°
O0RH1O391.0°94.9°
RH1O0C5110.3°109.0°
RH1O3C7117.0°117.1°
O9RH2O490.3°90.8°
RH2O9C5110.6°114.1°
RH2O4C7121.6°109.2°
O0C5O9139.8°120.1°
O0C5C6114.1°108.0°
O0C5H991.4°106.6°
O9C5C6105.9°107.9°
O9C5H991.4°106.6°
C6C5H991.1°106.9°
C5C6H10109.5°109.4°
C5C6H11109.4°109.5°
C5C6H12109.5°109.5°
O3C7O4126.0°122.8°
O3C7C8119.1°108.5°
O3C7H1390.1°104.8°
O4C7C8114.9°109.0°
O4C7H1390.0°105.6°
C8C7H1390.0°104.6°
C7C8H14109.5°109.5°
C7C8H15109.4°109.4°
C7C8H16109.5°109.5°
H2C2H3109.4°109.5°
H2C2H4109.5°109.5°
H3C2H4109.5°109.5°
H6C4H7109.5°109.5°
H6C4H8109.5°109.5°
H7C4H8109.5°109.5°
H10C6H11109.4°109.5°
H10C6H12109.5°109.6°
H11C6H12109.5°109.4°
H14C8H15109.5°109.5°
H14C8H16109.5°109.5°
H15C8H16109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C2C1O1O2179.7°126.2°
C2C1O1H190.2°113.4°
C2C1O2H190.2°113.6°
C2C1O1RH1176.0°157.5°
C2C1O2RH2178.4°123.1°
C1C2H2H3120.0°119.9°
C1C2H2H4120.0°120.0°
C1C2H3H4120.0°120.0°
O1C1O2H190.2°120.3°
O1C1O2RH22.0°3.1°
C1O1RH1O790.8°130.4°
C1O1RH1RH23.8°37.8°
C1O1RH1O085.8°55.7°
C1O1RH1O31.9°58.0°
O1C1C2H2180.0°60.0°
O1C1C2H360.0°180.0°
O1C1C2H460.0°60.0°
O2C1O1RH14.3°31.3°
C1O2RH2O887.4°61.4°
C1O2RH2RH10.7°24.7°
C1O2RH2O989.0°106.8°
C1O2RH2O413.9°144.9°
O2C1C2H20.3°73.9°
O2C1C2H3120.3°46.1°
O2C1C2H4119.7°166.1°
C4C3O7O8172.1°125.8°
C4C3O7H593.2°113.1°
C4C3O8H593.3°113.1°
C4C3O7RH1179.0°151.2°
C4C3O8RH2178.8°122.3°
C3C4H6H7120.0°119.9°
C3C4H6H8120.0°120.0°
C3C4H7H8119.9°120.0°
O1RH1RH2O21.8°32.3°
O1RH1O7C383.6°51.3°
O1RH1O7RH286.7°83.7°
O1RH1O7O040.4°57.9°
O1RH1O7O3175.7°169.3°
O1RH1RH2O887.4°57.6°
O1RH1RH2O088.8°89.2°
O1RH1RH2O3179.9°176.1°
O1RH1O0O3175.7°169.7°
O1RH1RH2O989.8°122.8°
O1RH1RH2O4179.8°146.7°
O1RH1O0C582.2°105.3°
O1RH1O3C72.3°7.4°
RH1O1C1H185.9°89.1°
O2RH2O8C383.9°115.0°
O2RH2RH1O789.2°118.6°
O2RH2O8RH186.9°92.8°
O2RH2O8O949.2°95.0°
O2RH2O8O4173.1°174.7°
O2RH2RH1O988.0°90.5°
O2RH2RH1O4178.4°179.0°
O2RH2RH1O087.0°56.9°
O2RH2RH1O3178.1°151.5°
O2RH2O9O4173.2°174.9°
O2RH2O9C580.4°49.0°
O2RH2O4C712.9°161.3°
RH2O2C1H188.2°123.3°
O7C3O8H594.7°121.2°
O7C3O8RH26.8°3.4°
C3O7RH1RH23.1°32.4°
C3O7RH1O043.2°109.2°
C3O7RH1O392.1°118.0°
O7C3C4H6180.0°60.0°
O7C3C4H760.0°180.0°
O7C3C4H860.0°60.0°
O8C3O7RH17.0°25.5°
C3O8RH2RH13.0°22.2°
C3O8RH2O934.7°20.0°
C3O8RH2O489.2°70.4°
O8C3C4H67.0°74.3°
O8C3C4H7127.1°45.6°
O8C3C4H8113.0°165.6°
O7RH1RH2O80.0°28.6°
O7RH1RH2O0176.2°175.5°
O7RH1RH2O392.7°89.9°
O7RH1O0O3135.3°132.6°
O7RH1RH2O9177.2°150.9°
O7RH1RH2O492.4°60.5°
O7RH1O0C541.8°163.1°
O7RH1O3C786.3°64.7°
RH1O7C3H587.8°95.7°
O8RH2RH1O9177.1°179.5°
O8RH2RH1O492.5°89.1°
O8RH2RH1O0176.2°146.9°
O8RH2RH1O392.8°118.5°
O8RH2O9O4124.0°90.2°
O8RH2O9C531.2°45.9°
O8RH2O4C788.2°115.2°
RH2O8C3H587.9°124.6°
RH2RH1O0O389.1°85.9°
RH1RH2O9O486.3°92.4°
RH2RH1O0C54.4°21.5°
RH1RH2O9C56.5°43.7°
RH2RH1O3C70.5°27.5°
RH1RH2O4C70.3°29.1°
O0RH1RH2O91.0°33.6°
O0RH1RH2O491.4°124.0°
RH1O0C5O915.5°5.4°
RH1O0C5C6170.3°129.6°
O0RH1O3C790.0°120.6°
RH1O0C5H978.4°115.8°
O3RH1RH2O990.1°61.0°
O3RH1RH2O40.3°29.4°
O3RH1O0C593.5°64.4°
RH1O3C7O40.4°13.5°
RH1O3C7C8179.8°142.1°
RH1O3C7H1389.7°106.6°
RH2O9C5O016.5°41.9°
RH2O9C5C6168.9°166.2°
O9RH2O4C787.9°53.0°
RH2O9C5H977.3°79.3°
O4RH2O9C592.8°136.1°
RH2O4C7O30.0°16.9°
RH2O4C7C8179.8°111.5°
RH2O4C7H1390.1°136.6°
O0C5O9C6174.6°124.3°
O0C5O9H993.9°121.2°
O0C5C6H992.1°114.4°
O0C5C6H10180.0°71.2°
O0C5C6H1160.0°48.8°
O0C5C6H1260.0°168.7°
O9C5C6H991.8°114.3°
O9C5C6H103.8°60.1°
O9C5C6H11116.1°179.9°
O9C5C6H12123.8°60.0°
C5C6H10H11120.0°120.0°
C5C6H10H12120.0°120.0°
C5C6H11H12120.0°120.0°
O3C7O4C8179.8°128.4°
O3C7O4H1390.1°119.7°
O3C7C8H1390.1°111.5°
O3C7C8H14180.0°69.2°
O3C7C8H1560.0°170.8°
O3C7C8H1660.0°50.8°
O4C7C8H1390.1°112.5°
O4C7C8H140.1°66.8°
O4C7C8H15120.2°53.2°
O4C7C8H16119.9°173.1°
C7C8H14H15120.0°120.0°
C7C8H14H16120.0°120.0°
C7C8H15H16120.0°119.9°
H1C1C2H289.8°172.9°
H1C1C2H330.1°67.1°
H1C1C2H4150.2°52.9°
H2C2H3H4120.0°120.1°
H5C3C4H686.5°172.9°
H5C3C4H733.5°67.1°
H5C3C4H8153.5°52.8°
H6C4H7H8120.0°120.1°
H9C5C6H1088.0°174.4°
H9C5C6H11152.1°65.6°
H9C5C6H1232.0°54.3°
H10C6H11H12120.0°120.1°
H13C7C8H1489.9°179.3°
H13C7C8H1530.1°59.3°
H13C7C8H16150.1°60.6°
H14C8H15H16120.0°120.1°

226262

PDB entries from 2024-10-16

PDB statisticsPDBj update infoContact PDBjnumon