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VVP

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C4C5doub1.38Å1.37ÅAromatic
C4C3sing1.39Å1.40ÅAromatic
C5C6sing1.39Å1.39ÅAromatic
C3C2doub1.38Å1.38ÅAromatic
C6N1sing1.38Å1.37ÅAromatic
C6C9doub1.41Å1.41ÅAromatic
N1C7sing1.37Å1.37ÅAromatic
C2C9sing1.40Å1.42ÅAromatic
C2O1sing1.36Å1.37Å
C9C8sing1.46Å1.43ÅAromatic
O1C1sing1.43Å1.43Å
C7C8doub1.34Å1.36ÅAromatic
N1H7sing0.97Å1.00Å
C4H5sing1.08Å1.08Å
C5H6sing1.08Å1.08Å
C7H8sing1.08Å1.08Å
C8H9sing1.08Å1.08Å
C1H1sing1.09Å1.10Å
C1H2sing1.09Å1.10Å
C1H3sing1.09Å1.10Å
C3H4sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C5C4C3122.1°120.7°
C4C5C6117.8°120.0°
C5C4H5118.9°119.6°
C4C5H6121.1°120.0°
C4C3C2120.6°120.3°
C3C4H5119.0°119.6°
C4C3H4119.7°119.8°
C5C6N1130.9°133.4°
C5C6C9121.6°119.5°
C6C5H6121.1°120.0°
C3C2C9118.7°119.6°
C3C2O1124.2°120.2°
C2C3H4119.7°119.9°
N1C6C9107.5°107.2°
C6N1C7109.1°109.8°
C6N1H7125.5°125.1°
C6C9C2119.0°119.9°
C6C9C8106.5°106.1°
N1C7C8109.8°109.9°
C7N1H7125.4°125.1°
N1C7H8125.1°125.0°
C9C2O1116.9°120.2°
C2C9C8134.5°134.0°
C2O1C1118.9°117.0°
C9C8C7107.1°107.0°
C9C8H9126.4°126.6°
O1C1H1109.5°109.5°
O1C1H2109.4°109.5°
O1C1H3109.4°109.4°
C8C7H8125.1°125.0°
C7C8H9126.4°126.5°
H1C1H2109.5°109.5°
H1C1H3109.5°109.5°
H2C1H3109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C5C4C3H5180.0°180.0°
C4C5C6H6180.0°180.0°
C5C4C3C23.6°0.0°
C4C5C6N1178.9°180.0°
C4C5C6C91.9°0.0°
C5C4C3H4176.3°180.0°
C3C4C5C63.4°0.0°
C4C3C2H4180.0°180.0°
C4C3C2C92.2°0.0°
C4C3C2O1177.9°180.0°
C3C4C5H6176.6°180.0°
C5C6N1C9179.3°180.0°
C5C6N1C7179.5°180.0°
C5C6C9C20.6°0.0°
C5C6C9C8178.8°179.8°
C5C6N1H70.5°0.2°
C6C5C4H5176.6°180.0°
C3C2C9C60.8°0.0°
C3C2C9O1176.0°180.0°
C3C2C9C8178.4°179.7°
C3C2O1C140.9°0.0°
C2C3C4H5176.3°180.0°
C6N1C7H7180.0°179.8°
N1C6C9C2180.0°180.0°
N1C6C9C80.6°0.3°
C6N1C7C81.1°0.2°
N1C6C5H61.1°0.0°
C6N1C7H8178.9°179.7°
C9C6N1C70.2°0.1°
C6C9C2C8179.2°179.7°
C6C9C2O1176.8°180.0°
C6C9C8C71.2°0.4°
C9C6N1H7179.8°179.8°
C9C6C5H6178.1°180.0°
C6C9C8H9178.7°180.0°
N1C7C8C91.4°0.3°
N1C7C8H8180.0°179.9°
N1C7C8H9178.6°180.0°
C9C2O1C1134.9°180.0°
C2C9C8C7179.5°179.9°
C2C9C8H90.5°0.3°
C9C2C3H4177.8°180.0°
O1C2C9C82.4°0.3°
C2O1C1H1180.0°180.0°
C2O1C1H260.0°60.0°
C2O1C1H360.0°60.0°
O1C2C3H42.0°0.0°
C9C8C7H9180.0°179.6°
C9C8C7H8178.6°179.6°
O1C1H1H2120.0°120.1°
O1C1H1H3120.0°120.0°
O1C1H2H3120.0°120.0°
C8C7N1H7178.9°180.0°
H7N1C7H81.1°0.1°
H5C4C5H63.4°0.1°
H5C4C3H43.7°0.0°
H8C7C8H91.5°0.1°
H1C1H2H3120.0°120.0°

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PDB entries from 2024-07-17

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