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VVK

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O1C3doub1.21Å1.19Å
C3Osing1.34Å1.20Å
C3C1sing1.51Å1.52Å
CC1sing1.53Å1.51Å
NC1sing1.47Å1.45Å
NC4sing1.40Å1.33Å
C1C2sing1.53Å1.53Å
C4C5doub1.39Å1.40ÅAromatic
C4C9sing1.39Å1.34ÅAromatic
C5C6sing1.38Å1.37ÅAromatic
O2C9sing1.36Å1.31Å
O2C10sing1.43Å1.36Å
C9C8doub1.38Å1.37ÅAromatic
C6C7doub1.38Å1.34ÅAromatic
C8C7sing1.38Å1.40ÅAromatic
C7H1sing1.08Å1.08Å
C8H2sing1.08Å1.08Å
C5H3sing1.08Å1.08Å
C6H4sing1.08Å1.08Å
C2H5sing1.09Å1.10Å
C2H6sing1.09Å1.10Å
C2H7sing1.09Å1.10Å
OH8sing0.97Å0.95Å
CH9sing1.09Å1.10Å
CH10sing1.09Å1.10Å
CH11sing1.09Å1.10Å
NH12sing0.97Å1.00Å
C10H13sing1.09Å1.10Å
C10H14sing1.09Å1.10Å
C10H15sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O1C3O120.8°120.0°
O1C3C1119.6°120.0°
OC3C1119.6°120.0°
C3OH8109.5°117.0°
C3C1C110.6°109.5°
C3C1N107.0°109.5°
C3C1C2108.9°109.5°
CC1N109.0°109.4°
CC1C2107.3°109.4°
C1CH9109.5°109.4°
C1CH10109.4°109.5°
C1CH11109.4°109.5°
C1NC4125.5°120.0°
NC1C2114.1°109.5°
C1NH12105.3°120.0°
NC4C5119.2°120.1°
NC4C9123.5°120.1°
C4NH12105.3°120.1°
C1C2H5109.5°109.5°
C1C2H6109.5°109.5°
C1C2H7109.5°109.4°
C5C4C9117.3°119.8°
C4C5C6121.7°120.0°
C4C5H3119.1°120.0°
C4C9O2116.5°120.1°
C4C9C8121.4°119.8°
C5C6C7120.6°120.2°
C6C5H3119.1°120.0°
C5C6H4119.7°119.9°
C9O2C10115.5°117.0°
O2C9C8122.0°120.1°
O2C10H13109.5°109.5°
O2C10H14109.5°109.5°
O2C10H15109.5°109.5°
C9C8C7120.9°120.1°
C9C8H2119.5°119.9°
C6C7C8118.1°120.2°
C6C7H1121.0°119.9°
C7C6H4119.7°119.9°
C8C7H1120.9°119.9°
C7C8H2119.5°120.0°
H5C2H6109.5°109.5°
H5C2H7109.5°109.4°
H6C2H7109.5°109.5°
H9CH10109.5°109.5°
H9CH11109.5°109.4°
H10CH11109.5°109.5°
H13C10H14109.5°109.5°
H13C10H15109.4°109.4°
H14C10H15109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O1C3OC1178.5°179.9°
O1C3C1C87.7°25.0°
O1C3C1N30.9°145.0°
O1C3C1C2154.7°95.0°
O1C3OH80.0°0.1°
OC3C1C90.8°155.0°
OC3C1N150.6°35.0°
OC3C1C226.8°85.0°
C3C1CN117.4°120.0°
C3C1CC2118.6°120.0°
C3C1NC2120.5°120.1°
C3C1NC465.6°174.6°
C3C1C2H5180.0°55.5°
C3C1C2H660.0°175.6°
C3C1C2H760.0°64.4°
C1C3OH8178.5°180.0°
C3C1CH9180.0°55.0°
C3C1CH1060.0°65.0°
C3C1CH1160.0°175.0°
C3C1NH12172.3°5.4°
CC1NC2119.8°119.9°
CC1NC4174.8°54.6°
CC1C2H560.3°64.5°
CC1C2H6179.7°55.6°
CC1C2H759.7°175.6°
C1CH9H10120.0°120.0°
C1CH9H11120.0°120.0°
C1CH10H11120.0°120.0°
CC1NH1252.6°125.4°
C1NC4H12122.2°180.0°
C1NC4C525.1°6.4°
C1NC4C9152.6°173.3°
NC1C2H560.5°175.6°
NC1C2H659.5°64.4°
NC1C2H7179.5°55.6°
NC1CH962.6°175.1°
NC1CH10177.4°55.0°
NC1CH1157.4°65.0°
C4NC1C254.9°65.3°
NC4C5C9177.8°179.7°
NC4C5C6177.7°180.0°
NC4C9O21.7°0.0°
NC4C9C8178.4°180.0°
NC4C5H32.3°0.0°
C1C2H5H6120.0°120.1°
C1C2H5H7120.0°119.9°
C1C2H6H7120.0°120.0°
C2C1CH961.4°65.0°
C2C1CH1058.7°175.0°
C2C1CH11178.6°54.9°
C2C1NH1267.2°114.7°
C4C5C6H3180.0°179.9°
C5C4C9O2176.1°179.7°
C5C4C9C80.7°0.3°
C4C5C6C70.6°0.1°
C4C5C6H4179.4°180.0°
C5C4NH12147.3°173.6°
C9C4C5C60.1°0.3°
C4C9O2C8176.8°180.0°
C4C9O2C10164.8°180.0°
C4C9C8C71.0°0.0°
C4C9C8H2178.9°180.0°
C9C4C5H3179.9°179.8°
C9C4NH1230.4°6.7°
C5C6C7H4180.0°179.9°
C5C6C7C80.3°0.2°
C5C6C7H1179.7°180.0°
O2C9C8C7175.6°180.0°
O2C9C8H24.5°0.0°
C9O2C10H13180.0°60.0°
C9O2C10H1460.0°60.0°
C9O2C10H1560.0°180.0°
C10O2C9C812.0°0.0°
O2C10H13H14120.0°120.0°
O2C10H13H15120.0°120.0°
O2C10H14H15120.0°120.0°
C9C8C7C60.5°0.2°
C9C8C7H2180.0°180.0°
C9C8C7H1179.5°180.0°
C6C7C8H1180.0°179.7°
C6C7C8H2179.5°179.7°
C7C6C5H3179.4°180.0°
C8C7C6H4179.7°179.7°
H1C7C8H20.5°0.0°
H1C7C6H40.3°0.0°
H3C5C6H40.6°0.1°
H5C2H6H7120.0°120.0°
H9CH10H11120.0°120.0°
H13C10H14H15120.0°119.9°

224931

PDB entries from 2024-09-11

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