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VVD

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1C2sing1.51Å1.51Å
C2O1doub1.21Å1.22Å
C2N1sing1.35Å1.35Å
N1C3sing1.40Å1.42Å
C3C4doub1.39Å1.39ÅAromatic
C4C5sing1.38Å1.39ÅAromatic
C5C6doub1.38Å1.37ÅAromatic
C6F1sing1.35Å1.36Å
C6C7sing1.40Å1.38ÅAromatic
C7C8doub1.40Å1.39ÅAromatic
C7C9sing1.48Å1.49Å
C9O2doub1.21Å1.25Å
C9O3sing1.35Å1.25Å
C3C8sing1.38Å1.40ÅAromatic
N1H4sing0.97Å1.00Å
C4H5sing1.08Å1.08Å
C5H6sing1.08Å1.08Å
C8H7sing1.08Å1.08Å
C1H2sing1.09Å1.10Å
C1H1sing1.09Å1.10Å
C1H3sing1.09Å1.10Å
O3H8sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C1C2O1121.8°120.0°
C1C2N1116.0°120.0°
C2C1H2109.5°109.5°
C2C1H1109.5°109.5°
C2C1H3109.5°109.5°
O1C2N1122.2°120.0°
C2N1C3127.5°120.0°
C2N1H4116.3°120.0°
N1C3C4118.8°120.0°
N1C3C8121.4°119.9°
C3N1H4116.3°120.0°
C3C4C5120.4°120.2°
C4C3C8119.8°120.1°
C3C4H5119.8°119.9°
C4C5C6118.7°120.2°
C5C4H5119.8°119.9°
C4C5H6120.7°119.9°
C5C6F1117.6°120.1°
C5C6C7122.8°119.9°
C6C5H6120.6°119.9°
F1C6C7119.6°120.0°
C6C7C8118.3°119.7°
C6C7C9121.4°120.1°
C8C7C9120.2°120.1°
C7C8C3120.0°119.8°
C7C8H7120.0°120.1°
C7C9O2117.6°120.0°
C7C9O3117.7°120.0°
O2C9O3124.8°120.0°
C9O3H8109.5°117.0°
C3C8H7120.0°120.2°
H2C1H1109.5°109.5°
H2C1H3109.5°109.4°
H1C1H3109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C1C2O1N1180.0°180.0°
C1C2N1C3177.5°174.8°
C1C2N1H42.5°5.1°
C2C1H2H1120.0°120.0°
C2C1H2H3120.0°120.0°
C2C1H1H3120.0°120.0°
O1C2N1C32.5°5.2°
O1C2N1H4177.5°175.0°
O1C2C1H20.0°90.0°
O1C2C1H1120.0°150.0°
O1C2C1H3120.0°30.0°
C2N1C3H4180.0°179.8°
C2N1C3C4126.7°146.8°
C2N1C3C852.8°33.8°
N1C2C1H2180.0°90.1°
N1C2C1H160.0°30.0°
N1C2C1H360.0°150.0°
N1C3C4C8179.5°179.4°
N1C3C4C5179.9°180.0°
N1C3C8C7179.8°180.0°
N1C3C4H50.1°0.3°
N1C3C8H70.2°0.3°
C3C4C5H5180.0°179.7°
C3C4C5C60.1°0.3°
C4C3C8C70.2°0.5°
C4C3N1H453.3°33.4°
C3C4C5H6179.9°179.8°
C4C3C8H7179.7°179.7°
C4C5C6H6180.0°179.9°
C4C5C6F1179.2°179.9°
C4C5C6C70.2°0.0°
C5C4C3C80.3°0.5°
C5C6F1C7179.5°180.0°
C5C6C7C80.3°0.0°
C5C6C7C9179.8°180.0°
C6C5C4H5179.9°180.0°
F1C6C7C8179.2°180.0°
F1C6C7C90.3°0.0°
F1C6C5H60.8°0.0°
C6C7C8C9179.5°180.0°
C6C7C9O260.9°0.0°
C6C7C9O3118.8°180.0°
C6C7C8C30.1°0.3°
C7C6C5H6179.7°180.0°
C6C7C8H7179.9°180.0°
C8C7C9O2118.6°180.0°
C8C7C9O361.7°0.0°
C7C8C3H7180.0°179.8°
C7C9O2O3179.7°179.9°
C9C7C8C3179.5°179.8°
C9C7C8H70.5°0.0°
C7C9O3H8179.7°180.0°
O2C9O3H80.0°0.1°
C8C3N1H4127.1°146.0°
C8C3C4H5179.6°179.7°
H5C4C5H60.1°0.0°
H2C1H1H3120.0°120.0°

226707

PDB entries from 2024-10-30

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