Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

VU6

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N6C2sing1.38Å1.34Å
S3C2sing1.70Å1.72ÅAromatic
S3C23sing1.76Å1.73ÅAromatic
C29N30sing1.47Å1.49Å
C29C28sing1.53Å1.51Å
C2C1doub1.37Å1.39ÅAromatic
N30C31sing1.47Å1.49Å
C1C4sing1.43Å1.43Å
C1C22sing1.45Å1.42ÅAromatic
C23C24sing1.52Å1.50Å
C23C22doub1.34Å1.36ÅAromatic
C28C33sing1.53Å1.52Å
C28N10sing1.47Å1.47Å
C31C32sing1.53Å1.51Å
O8N7sing1.21Å1.44ÅAromatic
O8C21sing1.33Å1.34ÅAromatic
C4N5trip1.14Å1.15Å
N7C16doub1.31Å1.31ÅAromatic
C24C25sing1.53Å1.53Å
C22C27sing1.52Å1.52Å
N10C32sing1.47Å1.46Å
N10C11sing1.38Å1.42Å
N12C11doub1.32Å1.35ÅAromatic
N12C9sing1.33Å1.34ÅAromatic
C21C27sing1.50Å1.51Å
C21C17doub1.35Å1.35ÅAromatic
C16C9sing1.49Å1.48Å
C16C17sing1.41Å1.42ÅAromatic
C27C26sing1.53Å1.55Å
C27C20sing1.53Å1.55Å
C11N15sing1.33Å1.34ÅAromatic
C25C26sing1.53Å1.53Å
C9C13doub1.40Å1.39ÅAromatic
C17C18sing1.50Å1.50Å
N15C14doub1.32Å1.34ÅAromatic
C13C14sing1.38Å1.38ÅAromatic
C20C19sing1.53Å1.52Å
C18C19sing1.54Å1.52Å
C13H13sing1.08Å1.08Å
C20H20Bsing1.09Å1.10Å
C20H20Asing1.09Å1.10Å
C24H24Asing1.09Å1.10Å
C24H24Bsing1.09Å1.10Å
C26H26Bsing1.09Å1.10Å
C26H26Asing1.09Å1.10Å
C28H28sing1.09Å1.10Å
C14H14sing1.08Å1.08Å
C18H18Asing1.09Å1.10Å
C18H18Bsing1.09Å1.10Å
C19H19Bsing1.09Å1.10Å
C19H19Asing1.09Å1.10Å
C25H25Asing1.09Å1.10Å
C25H25Bsing1.09Å1.10Å
C29H29Bsing1.09Å1.10Å
C29H29Asing1.09Å1.10Å
C31H31Asing1.09Å1.10Å
C31H31Bsing1.09Å1.10Å
C32H32Bsing1.09Å1.10Å
C32H32Asing1.09Å1.10Å
C33H33Bsing1.09Å1.10Å
C33H33Csing1.09Å1.10Å
C33H33Asing1.09Å1.10Å
N30H30Asing1.01Å1.00Å
N6H6Bsing0.97Å1.00Å
N6H6Asing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
N6C2S3120.5°124.6°
N6C2C1128.6°124.6°
C2N6H6B109.5°120.0°
C2N6H6A109.4°120.0°
C2S3C2391.4°92.7°
S3C2C1110.9°110.7°
S3C23C24121.7°124.9°
S3C23C22112.7°110.8°
N30C29C28111.0°109.4°
C29N30C31112.2°110.8°
N30C29H29B109.1°109.5°
N30C29H29A109.1°109.5°
C29N30H30A108.8°111.0°
C29C28C33112.3°109.5°
C29C28N10110.7°109.4°
C29C28H28107.4°109.5°
C28C29H29B109.1°109.5°
C28C29H29A109.1°109.5°
C2C1C4121.1°123.3°
C2C1C22113.3°113.4°
N30C31C32110.5°109.4°
N30C31H31A109.2°109.5°
N30C31H31B109.2°109.5°
C31N30H30A108.8°111.0°
C4C1C22125.7°123.3°
C1C4N5177.7°180.0°
C1C22C23111.7°112.4°
C1C22C27125.0°124.3°
C24C23C22125.6°124.3°
C23C24C25109.6°108.8°
C23C24H24A109.4°109.6°
C23C24H24B109.5°109.6°
C23C22C27123.3°123.3°
C33C28N10111.0°109.5°
C33C28H28107.3°109.5°
C28C33H33B109.5°109.5°
C28C33H33C109.5°109.5°
C28C33H33A109.5°109.5°
C28N10C32119.5°110.9°
C28N10C11120.7°111.0°
N10C28H28107.9°109.5°
C31C32N10110.1°109.4°
C32C31H31A109.2°109.5°
C32C31H31B109.2°109.5°
C31C32H32B109.3°109.5°
C31C32H32A109.3°109.5°
N7O8C21107.3°111.6°
O8N7C16105.6°111.5°
O8C21C27121.6°129.8°
O8C21C17111.1°106.6°
N7C16C9121.8°127.1°
N7C16C17111.5°105.7°
C24C25C26110.4°109.1°
C25C24H24A109.5°109.6°
C25C24H24B109.4°109.6°
C24C25H25A109.2°109.6°
C24C25H25B109.2°109.5°
C22C27C21111.6°109.5°
C22C27C26108.8°109.2°
C22C27C20109.1°109.2°
C32N10C11119.8°111.0°
N10C32H32B109.3°109.5°
N10C32H32A109.3°109.5°
N10C11N12116.1°119.2°
N10C11N15117.4°119.1°
C11N12C9116.0°120.6°
N12C11N15126.5°121.7°
N12C9C16116.4°120.5°
N12C9C13122.4°119.0°
C27C21C17127.3°123.6°
C21C27C26108.8°110.1°
C21C27C20107.9°108.8°
C21C17C16104.5°104.6°
C21C17C18121.9°124.9°
C9C16C17126.6°127.1°
C16C9C13121.2°120.5°
C16C17C18133.6°130.6°
C26C27C20110.7°110.0°
C27C26C25113.3°109.2°
C27C26H26B108.5°109.5°
C27C26H26A108.5°109.5°
C27C20C19113.1°109.8°
C27C20H20B108.6°109.4°
C27C20H20A108.5°109.4°
C11N15C14115.3°120.9°
C25C26H26B108.5°109.6°
C25C26H26A108.5°109.6°
C26C25H25A109.2°109.5°
C26C25H25B109.2°109.6°
C9C13C14116.4°118.4°
C9C13H13121.8°120.7°
C17C18C19109.8°108.4°
C17C18H18A109.4°109.7°
C17C18H18B109.4°109.7°
N15C14C13123.5°119.3°
N15C14H14118.3°120.3°
C14C13H13121.8°120.8°
C13C14H14118.2°120.4°
C20C19C18110.4°109.5°
C19C20H20B108.5°109.5°
C19C20H20A108.5°109.4°
C20C19H19B109.2°109.5°
C20C19H19A109.2°109.5°
C19C18H18A109.4°109.7°
C19C18H18B109.4°109.7°
C18C19H19B109.2°109.4°
C18C19H19A109.2°109.5°
H20BC20H20A109.5°109.4°
H24AC24H24B109.5°109.6°
H26BC26H26A109.5°109.5°
H18AC18H18B109.5°109.7°
H19BC19H19A109.5°109.4°
H25AC25H25B109.5°109.6°
H29BC29H29A109.5°109.4°
H31AC31H31B109.5°109.5°
H32BC32H32A109.5°109.4°
H33BC33H33C109.5°109.5°
H33BC33H33A109.4°109.5°
H33CC33H33A109.5°109.5°
H6BN6H6A109.4°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
N6C2S3C1179.1°180.0°
N6C2S3C23178.9°179.9°
N6C2C1C41.7°0.1°
N6C2C1C22178.9°180.0°
C2N6H6BH6A120.0°179.9°
S3C2C1C4179.3°180.0°
S3C2C1C220.1°0.1°
C2S3C23C24176.5°179.9°
C2S3C23C220.2°0.2°
S3C2N6H6B0.0°180.0°
S3C2N6H6A120.0°0.1°
C23S3C2C10.2°0.1°
S3C23C22C10.2°0.2°
S3C23C24C22176.3°179.9°
S3C23C24C25160.6°163.1°
S3C23C22C27179.0°179.9°
S3C23C24H24A79.4°43.3°
S3C23C24H24B40.6°77.0°
N30C29C28H29B120.2°120.0°
N30C29C28H29A120.3°120.0°
C29N30C31H30A120.4°123.9°
N30C29C28C3376.4°61.5°
N30C29C28N1048.4°58.5°
C29N30C31C3259.2°59.3°
N30C29C28H28165.9°178.4°
N30C29H29BH29A119.3°120.0°
C29N30C31H31A61.0°179.3°
C29N30C31H31B179.3°60.7°
C28C29N30C3157.5°59.3°
C29C28C33N10124.6°119.9°
C29C28C33H28117.8°120.1°
C29C28N10H28117.2°120.0°
C29C28N10C3246.3°59.3°
C29C28N10C11136.9°176.8°
C28C29H29BH29A119.3°120.0°
C29C28C33H33B180.0°59.9°
C29C28C33H33C60.0°60.1°
C29C28C33H33A60.0°179.9°
C28C29N30H30A177.9°176.8°
C2C1C4C22179.3°179.9°
C2C1C22C230.1°0.2°
C2C1C4N549.4°124.3°
C2C1C22C27178.9°179.9°
C1C2N6H6B178.9°0.1°
C1C2N6H6A61.1°180.0°
N30C31C32H31A120.1°120.0°
N30C31C32H31B120.1°120.0°
N30C31C32N1051.6°58.4°
C31N30C29H29B177.7°60.7°
C31N30C29H29A62.8°179.3°
N30C31H31AH31B119.5°120.1°
N30C31C32H32B171.7°178.4°
N30C31C32H32A68.5°61.6°
C4C1C22C23179.5°179.9°
C4C1C22C271.8°0.0°
C1C22C23C24176.4°179.8°
C1C22C23C27178.8°179.9°
C22C1C4N5131.2°55.8°
C1C22C27C2150.2°76.4°
C1C22C27C26170.3°162.9°
C1C22C27C2068.9°42.7°
C23C24C25H24A120.0°119.8°
C23C24C25H24B120.0°119.9°
C24C23C22C272.4°0.1°
C23C24C25C2646.7°50.0°
C23C24H24AH24B119.9°120.3°
C23C24C25H25A166.8°69.9°
C23C24C25H25B73.5°169.9°
C22C23C24C2515.7°16.8°
C23C22C27C21131.2°103.8°
C23C22C27C2611.1°16.9°
C23C22C27C20109.7°137.2°
C22C23C24H24A104.3°136.6°
C22C23C24H24B135.7°103.1°
C33C28N10H28117.3°120.0°
C33C28N10C3279.2°60.6°
C33C28N10C1197.6°63.2°
C33C28C29H29B43.8°178.4°
C33C28C29H29A163.3°58.4°
C28C33H33BH33C120.0°120.0°
C28C33H33BH33A120.0°120.0°
C28C33H33CH33A120.0°120.0°
C28N10C32C3147.9°59.3°
C28N10C32C11176.8°123.9°
C28N10C11N122.7°180.0°
C28N10C11N15178.0°0.1°
N10C28C29H29B168.6°61.6°
N10C28C29H29A71.9°178.4°
C28N10C32H32B167.9°179.3°
C28N10C32H32A72.2°60.7°
N10C28C33H33B55.5°60.0°
N10C28C33H33C64.6°180.0°
N10C28C33H33A175.4°60.0°
C31C32N10H32B120.1°120.0°
C31C32N10H32A120.1°120.0°
C31C32N10C11135.3°176.8°
C32C31H31AH31B119.6°120.0°
C31C32H32BH32A119.7°120.0°
C32C31N30H30A179.6°176.8°
N7O8C21C27178.4°179.9°
N7O8C21C170.1°0.2°
O8N7C16C9178.3°179.9°
O8N7C16C170.0°0.2°
C21O8N7C160.0°0.0°
O8C21C27C2253.1°44.2°
O8C21C27C17178.0°179.9°
O8C21C17C160.0°0.2°
O8C21C27C2667.0°75.9°
O8C21C27C20172.9°163.5°
O8C21C17C18178.5°179.9°
N7C16C9N1220.8°155.0°
N7C16C17C210.0°0.3°
N7C16C9C17178.0°179.9°
N7C16C9C13157.9°24.9°
N7C16C17C18178.3°179.9°
C24C25C26C2764.2°69.9°
C24C25C26H25A120.1°119.9°
C24C25C26H25B120.1°119.9°
C25C24H24AH24B120.0°120.3°
C24C25C26H26B175.3°170.2°
C24C25C26H26A56.3°50.1°
C24C25H25AH25B119.5°120.1°
C22C27C21C26120.1°120.1°
C22C27C21C20119.8°119.3°
C22C27C21C17128.9°135.7°
C22C27C26C20119.8°119.8°
C22C27C26C2543.6°50.2°
C22C27C20C19161.1°169.0°
C22C27C20H20B78.4°48.8°
C22C27C20H20A40.6°71.0°
C22C27C26H26B164.1°170.2°
C22C27C26H26A77.0°69.8°
C32N10C11N12179.5°56.2°
C32N10C11N151.2°123.8°
C32N10C28H28163.5°179.3°
N10C32C31H31A68.5°178.4°
N10C32C31H31B171.8°61.6°
N10C32H32BH32A119.8°120.1°
N10C11N12N15179.3°180.0°
N10C11N12C9178.7°180.0°
N10C11N15C14178.6°180.0°
C11N10C28H2819.7°56.8°
C11N10C32H32B15.2°56.8°
C11N10C32H32A104.6°63.2°
C11N12C9C16178.6°180.0°
C11N12C9C130.0°0.1°
N12C11N15C140.7°0.0°
N12C9C16C13178.6°179.9°
N12C9C16C17161.2°25.1°
C9N12C11N150.6°0.0°
N12C9C13C140.5°0.0°
N12C9C13H13179.5°179.9°
C27C21C17C16178.2°179.8°
C21C27C26C20118.4°119.9°
C21C27C26C25165.3°70.1°
C27C21C17C180.4°0.1°
C21C27C20C1939.7°49.5°
C21C27C20H20B160.3°70.7°
C21C27C20H20A80.8°169.5°
C21C27C26H26B74.1°49.9°
C21C27C26H26A44.8°170.0°
C21C17C16C9178.2°179.8°
C21C17C16C18178.4°179.7°
C17C21C27C26111.0°104.2°
C17C21C27C209.1°16.4°
C21C17C18C1921.5°16.4°
C21C17C18H18A98.5°103.3°
C21C17C18H18B141.6°136.2°
C9C16C17C183.5°0.2°
C16C9C13C14179.1°180.0°
C16C9C13H130.9°0.0°
C17C16C9C1320.2°154.9°
C16C17C18C19156.6°163.2°
C16C17C18H18A83.4°77.1°
C16C17C18H18B36.6°43.4°
C27C26C25H26B120.6°119.9°
C27C26C25H26A120.5°120.0°
C26C27C20C1979.3°71.2°
C26C27C20H20B41.3°168.6°
C26C27C20H20A160.2°48.8°
C27C26H26BH26A118.3°120.1°
C27C26C25H25A175.7°50.0°
C27C26C25H25B55.9°170.3°
C20C27C26C2576.3°170.0°
C27C20C19H20B120.5°120.2°
C27C20C19H20A120.5°120.1°
C27C20C19C1863.7°69.3°
C27C20H20BH20A118.3°119.8°
C20C27C26H26B44.3°70.0°
C20C27C26H26A163.2°50.0°
C27C20C19H19B56.4°50.7°
C27C20C19H19A176.1°170.7°
C11N15C14C130.0°0.1°
C11N15C14H14180.0°180.0°
C26C25C24H24A73.3°169.8°
C26C25C24H24B166.7°69.9°
C25C26H26BH26A118.3°120.2°
C26C25H25AH25B119.6°120.2°
C9C13C14N150.5°0.0°
C9C13C14H13180.0°180.0°
C9C13C14H14179.5°179.9°
C17C18C19C2051.2°49.2°
C17C18C19H18A120.0°119.7°
C17C18C19H18B120.0°119.8°
C17C18H18AH18B119.9°120.6°
C17C18C19H19B69.0°70.8°
C17C18C19H19A171.3°169.3°
N15C14C13H14180.0°179.9°
N15C14C13H13179.5°180.0°
C20C19C18H19B120.1°120.0°
C20C19C18H19A120.1°120.1°
C19C20H20BH20A118.3°119.8°
C20C19C18H18A68.8°70.5°
C20C19C18H18B171.2°169.0°
C20C19H19BH19A119.6°120.0°
C18C19C20H20B175.7°50.9°
C18C19C20H20A56.8°170.6°
C19C18H18AH18B119.9°120.5°
C18C19H19BH19A119.6°119.9°
H13C13C14H140.6°0.1°
H20BC20C19H19B64.1°170.8°
H20BC20C19H19A55.6°69.2°
H20AC20C19H19B177.0°69.4°
H20AC20C19H19A63.3°50.6°
H24AC24C25H25A46.8°49.9°
H24AC24C25H25B166.6°70.3°
H24BC24C25H25A73.1°170.2°
H24BC24C25H25B46.6°50.0°
H26BC26C25H25A55.1°69.9°
H26BC26C25H25B64.6°50.4°
H26AC26C25H25A63.8°170.0°
H26AC26C25H25B176.5°69.8°
H28C28C29H29B73.9°58.4°
H28C28C29H29A45.6°61.6°
H28C28C33H33B62.2°179.9°
H28C28C33H33C177.8°59.9°
H28C28C33H33A57.8°60.0°
H18AC18C19H19B171.0°169.5°
H18AC18C19H19A51.3°49.6°
H18BC18C19H19B51.1°49.0°
H18BC18C19H19A68.7°70.9°
H29BC29N30H30A61.9°63.2°
H29AC29N30H30A57.7°56.8°
H31AC31C32H32B51.6°61.6°
H31AC31C32H32A171.4°58.4°
H31AC31N30H30A59.4°56.8°
H31BC31C32H32B68.1°58.4°
H31BC31C32H32A51.7°178.4°
H31BC31N30H30A60.3°63.2°
H33BC33H33CH33A120.0°120.0°

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon