Loading
PDBj
English日本語简体中文繁體中文한국어
✖
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
SummaryGeometryRelated PDB entries

VU3

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
CAWCAOsing1.51Å1.52Å
CAWCAPsing1.53Å1.54Å
CAONAQsing1.37Å1.36ÅAromatic
CAOC17doub1.34Å1.39ÅAromatic
NAQCAXsing1.38Å1.35ÅAromatic
CAXCANsing1.39Å1.40ÅAromatic
CAXCAMdoub1.41Å1.38ÅAromatic
CANCAJdoub1.38Å1.40ÅAromatic
CAJCAFsing1.39Å1.40ÅAromatic
CAFCAIdoub1.37Å1.40ÅAromatic
CAICAMsing1.40Å1.40ÅAromatic
CAMC17sing1.46Å1.43ÅAromatic
CAPN1sing1.47Å1.48Å
CAVCADsing1.38Å1.40ÅAromatic
CAVCAUdoub1.38Å1.40ÅAromatic
CADCACdoub1.38Å1.39ÅAromatic
CACCARsing1.38Å1.39ÅAromatic
CARCAEdoub1.38Å1.40ÅAromatic
CAECAUsing1.38Å1.40ÅAromatic
CAUCASsing1.51Å1.49Å
CASCATsing1.53Å1.53Å
CASCAKsing1.53Å1.53Å
CATCALsing1.53Å1.52Å
CAKCAGsing1.53Å1.53Å
CAGN1sing1.47Å1.48Å
CALN1sing1.47Å1.47Å
CAWHAW1sing1.09Å1.10Å
CAWHAW2sing1.09Å1.10Å
CAPHAP1sing1.09Å1.10Å
CAPHAP2sing1.09Å1.10Å
NAQHAQsing0.97Å1.00Å
C17H17sing1.08Å1.08Å
CANHANsing1.08Å1.08Å
CAJHAJsing1.08Å1.08Å
CAFHAFsing1.08Å1.08Å
CAIHAIsing1.08Å1.08Å
CAVHAVsing1.08Å1.08Å
CADHADsing1.08Å1.08Å
CACHACsing1.08Å1.08Å
CARHARsing1.08Å1.08Å
CAEHAEsing1.08Å1.08Å
CASHASsing1.09Å1.10Å
CATHAT1sing1.09Å1.10Å
CATHAT2sing1.09Å1.10Å
CAKHAK1sing1.09Å1.10Å
CAKHAK2sing1.09Å1.10Å
CALHAL1sing1.09Å1.10Å
CALHAL2sing1.09Å1.10Å
CAGHAG1sing1.09Å1.10Å
CAGHAG2sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
CAOCAWCAP110.1°109.5°
CAWCAONAQ125.0°125.0°
CAWCAOC17125.1°125.1°
CAOCAWHAW1109.2°109.4°
CAOCAWHAW2109.1°109.5°
CAWCAPN1109.7°109.5°
CAPCAWHAW1109.3°109.5°
CAPCAWHAW2109.1°109.6°
CAWCAPHAP1109.4°109.5°
CAWCAPHAP2109.3°109.5°
NAQCAOC17109.7°109.9°
CAONAQCAX111.4°109.9°
CAONAQHAQ124.3°125.1°
CAOC17CAM102.6°107.0°
CAOC17H17128.7°126.5°
NAQCAXCAN134.5°133.5°
NAQCAXCAM104.9°107.1°
CAXNAQHAQ124.3°125.0°
CANCAXCAM120.6°119.3°
CAXCANCAJ119.4°119.8°
CAXCANHAN120.3°120.1°
CAXCAMCAI120.4°119.9°
CAXCAMC17111.4°106.1°
CANCAJCAF120.1°120.7°
CAJCANHAN120.3°120.1°
CANCAJHAJ120.0°119.7°
CAJCAFCAI120.0°120.5°
CAFCAJHAJ119.9°119.7°
CAJCAFHAF120.0°119.8°
CAFCAICAM119.5°119.8°
CAICAFHAF120.0°119.7°
CAFCAIHAI120.3°120.1°
CAICAMC17128.2°134.1°
CAMCAIHAI120.2°120.1°
CAMC17H17128.7°126.5°
CAPN1CAG116.4°111.0°
CAPN1CAL112.2°111.0°
N1CAPHAP1109.4°109.5°
N1CAPHAP2109.3°109.5°
CADCAVCAU120.1°120.0°
CAVCADCAC120.5°120.0°
CADCAVHAV120.0°120.0°
CAVCADHAD119.8°120.0°
CAVCAUCAE119.2°120.0°
CAVCAUCAS119.8°120.1°
CAUCAVHAV120.0°120.0°
CADCACCAR119.7°120.0°
CACCADHAD119.8°120.0°
CADCACHAC120.1°120.0°
CACCARCAE119.8°120.0°
CARCACHAC120.2°120.0°
CACCARHAR120.1°120.0°
CARCAECAU120.6°120.0°
CAECARHAR120.1°119.9°
CARCAEHAE119.7°120.0°
CAECAUCAS120.8°120.0°
CAUCAEHAE119.7°120.0°
CAUCASCAT112.0°109.5°
CAUCASCAK114.5°109.6°
CAUCASHAS105.5°109.5°
CATCASCAK113.3°109.1°
CASCATCAL110.9°109.3°
CATCASHAS106.8°109.5°
CASCATHAT1109.0°109.5°
CASCATHAT2108.7°109.5°
CASCAKCAG111.8°109.3°
CAKCASHAS103.9°109.5°
CASCAKHAK1108.7°109.4°
CASCAKHAK2108.2°109.5°
CATCALN1106.3°109.5°
CALCATHAT1109.0°109.5°
CALCATHAT2108.7°109.5°
CATCALHAL1110.5°109.5°
CATCALHAL2111.2°109.5°
CAKCAGN1107.9°109.5°
CAGCAKHAK1108.7°109.5°
CAGCAKHAK2108.2°109.6°
CAKCAGHAG1110.0°109.5°
CAKCAGHAG2110.4°109.4°
CAGN1CAL110.5°111.2°
N1CAGHAG1110.0°109.4°
N1CAGHAG2110.4°109.5°
N1CALHAL1110.6°109.4°
N1CALHAL2111.3°109.4°
HAW1CAWHAW2110.0°109.5°
HAP1CAPHAP2109.7°109.5°
HAT1CATHAT2110.5°109.5°
HAK1CAKHAK2111.3°109.5°
HAL1CALHAL2107.0°109.5°
HAG1CAGHAG2108.2°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
CAOCAWCAPHAW1120.0°119.9°
CAOCAWCAPHAW2119.7°120.0°
CAWCAONAQC17174.7°179.8°
CAWCAONAQCAX176.5°180.0°
CAWCAOC17CAM176.4°179.8°
CAOCAWCAPN122.5°180.0°
CAOCAWHAW1HAW2119.7°119.9°
CAOCAWCAPHAP197.5°60.1°
CAOCAWCAPHAP2142.4°60.0°
CAWCAONAQHAQ3.5°0.1°
CAWCAOC17H173.7°0.0°
CAPCAWCAONAQ92.1°95.0°
CAPCAWCAOC1781.8°85.3°
CAWCAPN1HAP1120.0°120.0°
CAWCAPN1HAP2119.9°120.0°
CAWCAPN1CAG143.4°169.9°
CAWCAPN1CAL87.9°65.8°
CAPCAWHAW1HAW2119.7°120.1°
CAWCAPHAP1HAP2119.9°120.0°
CAONAQCAXHAQ180.0°179.9°
CAONAQCAXCAN179.0°180.0°
CAONAQCAXCAM1.0°0.1°
NAQCAOC17CAM1.7°0.4°
NAQCAOCAWHAW1147.9°145.0°
NAQCAOCAWHAW227.7°25.1°
NAQCAOC17H17178.3°179.7°
C17CAONAQCAX1.8°0.2°
CAOC17CAMCAX1.1°0.4°
CAOC17CAMCAI178.7°179.9°
CAOC17CAMH17180.0°179.8°
C17CAOCAWHAW138.2°34.7°
C17CAOCAWHAW2158.5°154.6°
C17CAONAQHAQ178.2°179.7°
NAQCAXCANCAM180.0°179.9°
NAQCAXCANCAJ179.5°180.0°
NAQCAXCAMCAI179.8°180.0°
NAQCAXCAMC170.1°0.3°
NAQCAXCANHAN0.5°0.1°
CAXCANCAJHAN180.0°180.0°
CAXCANCAJCAF0.8°0.1°
CANCAXCAMCAI0.2°0.0°
CANCAXCAMC17179.9°179.8°
CANCAXNAQHAQ1.1°0.1°
CAXCANCAJHAJ179.2°180.0°
CAMCAXCANCAJ0.5°0.1°
CAXCAMCAICAF0.2°0.0°
CAXCAMCAIC17179.8°179.6°
CAMCAXNAQHAQ178.9°180.0°
CAXCAMC17H17178.9°179.7°
CAMCAXCANHAN179.5°180.0°
CAXCAMCAIHAI179.8°180.0°
CANCAJCAFHAJ180.0°179.9°
CANCAJCAFCAI0.7°0.0°
CANCAJCAFHAF179.3°179.9°
CAJCAFCAIHAF180.0°179.9°
CAJCAFCAICAM0.4°0.0°
CAFCAJCANHAN179.2°180.0°
CAJCAFCAIHAI179.6°180.0°
CAFCAICAMHAI180.0°180.0°
CAFCAICAMC17180.0°179.7°
CAICAFCAJHAJ179.3°180.0°
CAICAMC17H171.2°0.1°
CAMCAICAFHAF179.6°179.9°
C17CAMCAIHAI0.0°0.4°
CAPN1CALCAT157.7°174.1°
CAPN1CAGCAK163.2°174.1°
CAPN1CAGCAL129.5°124.1°
N1CAPCAWHAW1142.5°60.0°
N1CAPCAWHAW297.2°60.0°
N1CAPHAP1HAP2119.9°120.0°
CAPN1CALHAL137.7°54.1°
CAPN1CALHAL281.1°65.8°
CAPN1CAGHAG176.9°65.9°
CAPN1CAGHAG242.5°54.2°
CADCAVCAUHAV180.0°179.8°
CAVCADCACHAD180.0°180.0°
CAVCADCACCAR2.1°0.0°
CADCAVCAUCAE0.7°0.0°
CADCAVCAUCAS176.0°180.0°
CAVCADCACHAC177.9°180.0°
CAUCAVCADCAC1.4°0.0°
CAVCAUCAECAR2.2°0.0°
CAVCAUCAECAS175.3°180.0°
CAVCAUCASCAT179.3°120.0°
CAVCAUCASCAK48.6°120.3°
CAUCAVCADHAD178.5°180.0°
CAVCAUCAEHAE177.8°180.0°
CAVCAUCASHAS64.9°0.2°
CADCACCARHAC180.0°180.0°
CADCACCARCAE0.6°0.1°
CACCADCAVHAV178.6°179.8°
CADCACCARHAR179.4°180.0°
CACCARCAEHAR180.0°179.9°
CACCARCAECAU1.5°0.0°
CARCACCADHAD177.9°180.0°
CACCARCAEHAE178.5°179.9°
CARCAECAUHAE180.0°180.0°
CARCAECAUCAS177.4°180.0°
CAECARCACHAC179.4°180.0°
CAECAUCASCAT5.5°60.0°
CAECAUCASCAK136.2°59.7°
CAECAUCAVHAV179.3°179.8°
CAUCAECARHAR178.4°180.0°
CAECAUCASHAS110.3°179.9°
CAUCASCATCAK131.3°120.0°
CAUCASCATHAS115.0°120.1°
CAUCASCAKHAS114.4°120.2°
CAUCASCATCAL179.8°177.6°
CAUCASCAKCAG175.1°177.6°
CASCAUCAVHAV4.0°0.2°
CASCAUCAEHAE2.5°0.1°
CAUCASCATHAT159.8°57.7°
CAUCASCATHAT260.8°62.4°
CAUCASCAKHAK164.9°62.5°
CAUCASCAKHAK256.1°57.6°
CATCASCAKHAS115.5°119.9°
CASCATCALHAT1120.0°119.9°
CASCATCALHAT2119.4°120.0°
CATCASCAKCAG45.1°57.7°
CASCATCALN159.1°59.1°
CASCATHAT1HAT2119.4°120.1°
CATCASCAKHAK1165.1°177.6°
CATCASCAKHAK273.9°62.4°
CASCATCALHAL1179.2°179.1°
CASCATCALHAL262.1°60.8°
CAKCASCATCAL48.5°57.6°
CASCAKCAGHAK1120.0°119.9°
CASCAKCAGHAK2119.0°120.0°
CASCAKCAGN152.5°59.2°
CAKCASCATHAT171.5°62.3°
CAKCASCATHAT2167.9°177.6°
CASCAKHAK1HAK2119.0°120.0°
CASCAKCAGHAG167.5°60.8°
CASCAKCAGHAG2173.2°179.2°
CATCALN1CAG70.6°61.7°
CATCALN1HAL1120.0°120.0°
CATCALN1HAL2121.2°120.0°
CALCATCASHAS65.3°62.3°
CALCATHAT1HAT2119.4°120.1°
CATCALHAL1HAL2121.3°120.1°
CAKCAGN1HAG1120.0°120.0°
CAKCAGN1HAG2120.7°120.0°
CAKCAGN1CAL67.3°61.7°
CAGCAKCASHAS70.4°62.2°
CAGCAKHAK1HAK2119.0°120.2°
CAKCAGHAG1HAG2120.7°120.0°
CAGN1CAPHAP123.4°50.0°
CAGN1CAPHAP296.7°70.0°
N1CAGCAKHAK1172.5°179.0°
N1CAGCAKHAK266.5°60.8°
CAGN1CALHAL1169.4°178.2°
CAGN1CALHAL250.7°58.3°
N1CAGHAG1HAG2120.6°120.0°
CALN1CAPHAP1152.1°174.2°
CALN1CAPHAP232.0°54.2°
N1CALCATHAT160.9°60.8°
N1CALCATHAT2178.6°179.1°
N1CALHAL1HAL2121.3°119.9°
CALN1CAGHAG152.7°58.2°
CALN1CAGHAG2172.0°178.3°
HAW1CAWCAPHAP122.5°180.0°
HAW1CAWCAPHAP297.6°60.0°
HAW2CAWCAPHAP1142.8°60.0°
HAW2CAWCAPHAP222.6°180.0°
HANCANCAJHAJ0.8°0.1°
HAJCAJCAFHAF0.8°0.1°
HAFCAFCAIHAI0.4°0.1°
HAVCAVCADHAD1.4°0.2°
HADCADCACHAC2.1°0.0°
HACCACCARHAR0.6°0.0°
HARCARCAEHAE1.6°0.0°
HASCASCATHAT1174.7°177.8°
HASCASCATHAT254.2°57.7°
HASCASCAKHAK149.6°57.7°
HASCASCAKHAK2170.6°177.7°
HAT1CATCALHAL159.2°59.2°
HAT1CATCALHAL2177.9°179.2°
HAT2CATCALHAL161.4°60.9°
HAT2CATCALHAL257.3°59.2°
HAK1CAKCAGHAG152.5°59.1°
HAK1CAKCAGHAG266.8°60.9°
HAK2CAKCAGHAG1173.5°179.3°
HAK2CAKCAGHAG254.2°59.2°

246704

PDB entries from 2025-12-24

PDB statisticsPDBj update infoContact PDBjnumon