VTB

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
O6	C1	sing	1.43Å	1.43Å
O8	C2	sing	1.43Å	1.43Å
C1	C2	sing	1.53Å	1.55Å
C1	C7	sing	1.53Å	1.52Å
O12	C10	sing	1.43Å	1.45Å
O12	P15	sing	1.61Å	1.62Å
C2	C3	sing	1.53Å	1.54Å
O16	P15	doub	1.48Å	1.60Å
C10	C7	sing	1.53Å	1.54Å
O17	P15	sing	1.61Å	1.61Å
P15	O18	sing	1.61Å	1.62Å
C7	O4	sing	1.43Å	1.44Å
C3	O15	sing	1.43Å	1.44Å
C3	C20	sing	1.53Å	1.52Å
O4	C20	sing	1.43Å	1.44Å
C20	O20	sing	1.43Å	1.43Å
C20	C21	sing	1.53Å	1.53Å
C21	O22	sing	1.43Å	1.42Å
C1	H1	sing	1.09Å	1.10Å
C2	H2	sing	1.09Å	1.10Å
C3	H3	sing	1.09Å	1.10Å
O6	H4	sing	0.97Å	0.95Å
C7	H5	sing	1.09Å	1.10Å
O8	H6	sing	0.97Å	0.95Å
C10	H7	sing	1.09Å	1.10Å
C10	H8	sing	1.09Å	1.10Å
O15	H9	sing	0.97Å	0.95Å
O17	H10	sing	0.97Å	0.95Å
O18	H11	sing	0.97Å	0.95Å
O20	H12	sing	0.97Å	0.95Å
C21	H13	sing	1.09Å	1.10Å
C21	H14	sing	1.09Å	1.10Å
O22	H15	sing	0.97Å	0.95Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
O6	C1	C2	117.3°	109.5°
O6	C1	C7	106.9°	109.5°
O6	C1	H1	105.6°	109.6°
C1	O6	H4	109.5°	114.0°
O8	C2	C1	112.5°	109.5°
O8	C2	C3	109.0°	109.5°
O8	C2	H2	106.7°	109.6°
C2	O8	H6	109.5°	114.0°
C2	C1	C7	116.7°	109.1°
C1	C2	C3	117.1°	109.0°
C2	C1	H1	104.4°	109.5°
C1	C2	H2	105.3°	109.5°
C1	C7	C10	108.3°	109.5°
C1	C7	O4	110.3°	109.4°
C7	C1	H1	104.7°	109.5°
C1	C7	H5	106.7°	109.5°
C10	O12	P15	118.8°	123.0°
O12	C10	C7	113.4°	109.4°
O12	C10	H7	108.5°	109.5°
O12	C10	H8	108.5°	109.5°
O12	P15	O16	115.3°	109.4°
O12	P15	O17	109.8°	109.5°
O12	P15	O18	107.2°	109.5°
C2	C3	O15	111.0°	109.5°
C2	C3	C20	111.3°	109.2°
C3	C2	H2	105.4°	109.6°
C2	C3	H3	107.5°	109.6°
O16	P15	O17	108.0°	109.5°
O16	P15	O18	108.6°	109.5°
C10	C7	O4	117.1°	109.5°
C10	C7	H5	106.4°	109.5°
C7	C10	H7	108.5°	109.4°
C7	C10	H8	108.5°	109.5°
O17	P15	O18	107.6°	109.5°
P15	O17	H10	109.5°	114.0°
P15	O18	H11	109.5°	114.0°
C7	O4	C20	112.8°	114.1°
O4	C7	H5	107.5°	109.5°
O15	C3	C20	110.3°	109.5°
O15	C3	H3	108.8°	109.6°
C3	O15	H9	109.5°	114.0°
C3	C20	O4	104.0°	109.4°
C3	C20	O20	108.7°	109.4°
C3	C20	C21	113.8°	109.5°
C20	C3	H3	107.8°	109.5°
O4	C20	O20	113.9°	109.5°
O4	C20	C21	114.5°	109.6°
O20	C20	C21	102.1°	109.5°
C20	O20	H12	109.5°	114.0°
C20	C21	O22	114.3°	109.5°
C20	C21	H13	108.3°	109.5°
C20	C21	H14	108.3°	109.5°
O22	C21	H13	108.2°	109.4°
O22	C21	H14	108.2°	109.4°
C21	O22	H15	109.5°	114.1°
H7	C10	H8	109.5°	109.5°
H13	C21	H14	109.4°	109.5°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
O6	C1	C2	O8	25.5°	56.9°
O6	C1	C2	C7	128.7°	119.9°
O6	C1	C2	H1	116.4°	120.2°
O6	C1	C7	H1	111.7°	120.2°
O6	C1	C2	C3	152.9°	62.9°
O6	C1	C7	C10	5.8°	57.7°
O6	C1	C7	O4	135.2°	62.3°
O6	C1	C2	H2	90.4°	177.2°
O6	C1	C7	H5	108.3°	177.7°
O8	C2	C1	C3	127.5°	119.9°
O8	C2	C1	H2	115.9°	120.2°
O8	C2	C1	C7	103.3°	176.9°
O8	C2	C3	H2	114.2°	120.3°
O8	C2	C3	O15	103.9°	63.3°
O8	C2	C3	C20	132.8°	176.8°
O8	C2	C1	H1	141.8°	63.3°
O8	C2	C3	H3	14.9°	56.9°
C2	C1	C7	H1	114.7°	119.9°
C1	C2	C3	H2	116.6°	119.9°
C2	C1	C7	C10	127.7°	177.6°
C2	C1	C7	O4	1.6°	57.6°
C1	C2	C3	O15	126.9°	176.9°
C1	C2	C3	C20	3.6°	57.0°
C1	C2	C3	H3	114.3°	62.9°
C2	C1	O6	H4	180.0°	59.9°
C2	C1	C7	H5	118.1°	62.4°
C1	C2	O8	H6	180.0°	60.0°
C1	C7	C10	O12	84.0°	175.0°
C7	C1	C2	C3	24.2°	57.0°
C1	C7	C10	O4	125.4°	119.9°
C1	C7	C10	H5	114.4°	120.0°
C1	C7	O4	H5	115.9°	120.0°
C1	C7	O4	C20	52.2°	61.2°
C7	C1	C2	H2	140.9°	62.9°
C7	C1	O6	H4	46.8°	179.6°
C1	C7	C10	H7	36.6°	65.0°
C1	C7	C10	H8	155.4°	55.0°
C10	O12	P15	O16	178.4°	55.0°
O12	C10	C7	H7	120.6°	120.0°
O12	C10	C7	H8	120.6°	120.1°
C10	O12	P15	O17	59.3°	174.9°
C10	O12	P15	O18	57.3°	65.0°
O12	C10	C7	O4	150.6°	65.0°
O12	C10	C7	H5	30.4°	55.0°
O12	C10	H7	H8	118.2°	120.1°
O12	P15	O16	O17	123.3°	120.0°
O12	P15	O16	O18	120.3°	120.0°
P15	O12	C10	C7	107.9°	180.0°
O12	P15	O17	O18	116.4°	120.0°
P15	O12	C10	H7	131.6°	60.0°
P15	O12	C10	H8	12.7°	60.0°
O12	P15	O17	H10	126.5°	180.0°
O12	P15	O18	H11	125.2°	60.0°
C2	C3	O15	C20	123.8°	119.7°
C2	C3	O15	H3	118.1°	120.2°
C2	C3	C20	H3	117.7°	119.9°
C2	C3	C20	O4	51.0°	57.6°
C2	C3	C20	O20	70.6°	62.4°
C2	C3	C20	C21	176.3°	177.6°
C3	C2	C1	H1	90.7°	176.9°
C3	C2	O8	H6	48.3°	179.5°
C2	C3	O15	H9	180.0°	60.0°
O16	P15	O17	O18	117.1°	120.0°
O16	P15	O17	H10	0.0°	60.0°
O16	P15	O18	H11	0.0°	180.0°
C10	C7	O4	H5	119.6°	120.0°
C10	C7	O4	C20	176.6°	178.8°
C10	C7	C1	H1	117.5°	62.5°
C7	C10	H7	H8	118.2°	120.0°
O17	P15	O18	H11	116.7°	60.0°
O18	P15	O17	H10	117.1°	60.0°
C7	O4	C20	C3	81.6°	61.1°
C7	O4	C20	O20	36.7°	58.7°
C7	O4	C20	C21	153.7°	178.8°
O4	C7	C1	H1	113.1°	177.5°
O4	C7	C10	H7	88.8°	54.9°
O4	C7	C10	H8	30.0°	174.9°
O15	C3	C20	H3	118.7°	120.1°
O15	C3	C20	O4	174.7°	177.5°
O15	C3	C20	O20	53.0°	57.6°
O15	C3	C20	C21	60.0°	62.4°
O15	C3	C2	H2	10.3°	57.0°
C3	C20	O4	O20	118.2°	119.9°
C3	C20	O4	C21	124.8°	120.0°
C3	C20	O20	C21	120.6°	120.0°
C3	C20	C21	O22	74.8°	180.0°
C20	C3	C2	H2	113.0°	62.9°
C20	C3	O15	H9	56.2°	179.7°
C3	C20	O20	H12	180.0°	180.0°
C3	C20	C21	H13	164.5°	60.0°
C3	C20	C21	H14	45.9°	60.1°
O4	C20	O20	C21	124.0°	120.1°
O4	C20	C21	O22	44.6°	60.0°
O4	C20	C3	H3	66.7°	62.4°
C20	O4	C7	H5	63.8°	58.8°
O4	C20	O20	H12	64.5°	60.1°
O4	C20	C21	H13	76.1°	180.0°
O4	C20	C21	H14	165.4°	59.9°
O20	C20	C21	O22	168.2°	60.0°
O20	C20	C3	H3	171.7°	177.7°
O20	C20	C21	H13	47.5°	60.0°
O20	C20	C21	H14	71.1°	179.9°
C20	C21	O22	H13	120.7°	120.0°
C20	C21	O22	H14	120.7°	120.0°
C21	C20	C3	H3	58.6°	57.7°
C21	C20	O20	H12	59.5°	60.0°
C20	C21	H13	H14	117.8°	120.1°
C20	C21	O22	H15	180.0°	180.0°
O22	C21	H13	H14	117.8°	119.9°
H1	C1	C2	H2	25.9°	57.0°
H1	C1	O6	H4	64.3°	60.2°
H1	C1	C7	H5	3.3°	57.5°
H2	C2	C3	H3	129.1°	177.2°
H2	C2	O8	H6	65.0°	60.2°
H3	C3	O15	H9	61.9°	60.2°
H5	C7	C10	H7	151.0°	175.0°
H5	C7	C10	H8	90.2°	65.0°
H13	C21	O22	H15	59.2°	60.0°
H14	C21	O22	H15	59.3°	60.0°

Release date:	2015-10-14
Definition date:	2015-06-19
Last modified:	2020-07-17
Release status:	REL
Processing site:	RCSB
Derived from:	5A5L