VSV
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
OE1 | CD | sing | 1.34Å | 1.27Å | |
CD | OE2 | doub | 1.21Å | 1.25Å | |
CD | CG | sing | 1.51Å | 1.47Å | |
CG | CB | sing | 1.53Å | 1.48Å | |
CB | CA | sing | 1.53Å | 1.54Å | |
C | OXT | doub | 1.21Å | 1.25Å | |
C | O | sing | 1.34Å | 1.25Å | |
C | CA | sing | 1.51Å | 1.53Å | |
N | CAU | sing | 1.35Å | 1.44Å | |
N | CA | sing | 1.46Å | 1.44Å | |
CAU | OBC | doub | 1.22Å | 1.24Å | |
CAU | CAT | sing | 1.48Å | 1.48Å | |
CAT | CAQ | sing | 1.40Å | 1.41Å | Aromatic |
CAT | CAS | doub | 1.40Å | 1.39Å | Aromatic |
CAQ | CAO | doub | 1.38Å | 1.41Å | Aromatic |
CAS | CAR | sing | 1.38Å | 1.38Å | Aromatic |
CAR | CAP | doub | 1.38Å | 1.37Å | Aromatic |
CAP | CAO | sing | 1.38Å | 1.39Å | Aromatic |
CAO | CAN | sing | 1.51Å | 1.53Å | |
CAN | NAY | sing | 1.47Å | 1.38Å | |
NAY | CAA | sing | 1.39Å | 1.37Å | |
CAA | CAC | sing | 1.39Å | 1.40Å | Aromatic |
CAA | CAB | doub | 1.39Å | 1.41Å | Aromatic |
CAC | CAE | doub | 1.37Å | 1.39Å | Aromatic |
CAE | CAF | sing | 1.40Å | 1.41Å | Aromatic |
CAB | CAG | sing | 1.37Å | 1.40Å | Aromatic |
CAG | CAF | doub | 1.40Å | 1.39Å | Aromatic |
CAF | CAH | sing | 1.47Å | 1.51Å | |
CAH | CAI | doub | 1.36Å | 1.37Å | |
CAI | SBG | sing | 1.78Å | 1.75Å | |
CAI | CAK | sing | 1.47Å | 1.45Å | |
SBG | CAL | sing | 1.77Å | 1.74Å | |
CAL | NAX | sing | 1.34Å | 1.39Å | |
CAL | OBH | doub | 1.22Å | 1.22Å | |
NAX | CAK | sing | 1.32Å | 1.41Å | |
CAK | OBE | doub | 1.22Å | 1.22Å | |
OE1 | HE1 | sing | 0.97Å | 0.95Å | |
CG | HG1C | sing | 1.09Å | 1.10Å | |
CG | HG2C | sing | 1.09Å | 1.10Å | |
CB | HB1C | sing | 1.09Å | 1.10Å | |
CB | HB2C | sing | 1.09Å | 1.10Å | |
CA | HA | sing | 1.09Å | 1.10Å | |
O | H | sing | 0.97Å | 0.95Å | |
N | HB | sing | 0.97Å | 1.00Å | |
CAQ | HAQ | sing | 1.08Å | 1.08Å | |
CAS | HAS | sing | 1.08Å | 1.08Å | |
CAR | HAR | sing | 1.08Å | 1.08Å | |
CAP | HAP | sing | 1.08Å | 1.08Å | |
CAN | HAN1 | sing | 1.09Å | 1.10Å | |
CAN | HAN2 | sing | 1.09Å | 1.10Å | |
NAY | HAY | sing | 0.97Å | 1.00Å | |
CAC | HAC | sing | 1.08Å | 1.08Å | |
CAB | HAB | sing | 1.08Å | 1.08Å | |
CAE | HAE | sing | 1.08Å | 1.08Å | |
CAG | HAG | sing | 1.08Å | 1.08Å | |
CAH | HAH | sing | 1.08Å | 1.08Å | |
NAX | HAX | sing | 0.97Å | 1.00Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
OE1 | CD | OE2 | 124.2° | 120.0° |
OE1 | CD | CG | 123.7° | 120.0° |
CD | OE1 | HE1 | 109.5° | 117.0° |
OE2 | CD | CG | 111.8° | 120.0° |
CD | CG | CB | 110.6° | 109.5° |
CD | CG | HG1C | 109.1° | 109.4° |
CD | CG | HG2C | 108.9° | 109.5° |
CG | CB | CA | 106.6° | 109.5° |
CB | CG | HG1C | 109.1° | 109.4° |
CB | CG | HG2C | 108.8° | 109.5° |
CG | CB | HB1C | 110.5° | 109.4° |
CG | CB | HB2C | 111.1° | 109.5° |
CB | CA | C | 111.7° | 109.5° |
CB | CA | N | 105.1° | 109.5° |
CA | CB | HB1C | 110.5° | 109.5° |
CA | CB | HB2C | 111.1° | 109.5° |
CB | CA | HA | 110.8° | 109.5° |
OXT | C | O | 119.8° | 120.0° |
OXT | C | CA | 125.8° | 120.0° |
O | C | CA | 113.9° | 120.0° |
C | O | H | 109.5° | 117.0° |
C | CA | N | 109.3° | 109.4° |
C | CA | HA | 106.8° | 109.4° |
CAU | N | CA | 117.6° | 120.0° |
N | CAU | OBC | 122.8° | 120.0° |
N | CAU | CAT | 111.7° | 120.0° |
CAU | N | HB | 121.2° | 120.0° |
N | CA | HA | 113.2° | 109.4° |
CA | N | HB | 121.3° | 120.0° |
OBC | CAU | CAT | 125.3° | 120.0° |
CAU | CAT | CAQ | 118.5° | 120.2° |
CAU | CAT | CAS | 120.1° | 120.1° |
CAQ | CAT | CAS | 121.3° | 119.7° |
CAT | CAQ | CAO | 117.3° | 119.9° |
CAT | CAQ | HAQ | 121.4° | 120.1° |
CAT | CAS | CAR | 119.6° | 119.8° |
CAT | CAS | HAS | 120.2° | 120.1° |
CAQ | CAO | CAP | 120.1° | 120.1° |
CAQ | CAO | CAN | 121.6° | 120.0° |
CAO | CAQ | HAQ | 121.3° | 120.0° |
CAS | CAR | CAP | 120.5° | 120.2° |
CAR | CAS | HAS | 120.2° | 120.1° |
CAS | CAR | HAR | 119.7° | 119.9° |
CAR | CAP | CAO | 121.2° | 120.3° |
CAP | CAR | HAR | 119.8° | 119.9° |
CAR | CAP | HAP | 119.4° | 119.9° |
CAP | CAO | CAN | 118.0° | 119.9° |
CAO | CAP | HAP | 119.5° | 119.8° |
CAO | CAN | NAY | 113.8° | 109.5° |
CAO | CAN | HAN1 | 108.1° | 109.5° |
CAO | CAN | HAN2 | 107.1° | 109.5° |
CAN | NAY | CAA | 123.4° | 120.0° |
NAY | CAN | HAN1 | 108.1° | 109.4° |
NAY | CAN | HAN2 | 107.1° | 109.4° |
CAN | NAY | HAY | 105.1° | 120.0° |
NAY | CAA | CAC | 122.2° | 119.9° |
NAY | CAA | CAB | 119.2° | 119.9° |
CAA | NAY | HAY | 105.1° | 120.0° |
CAC | CAA | CAB | 118.6° | 120.2° |
CAA | CAC | CAE | 122.0° | 120.1° |
CAA | CAC | HAC | 119.0° | 120.0° |
CAA | CAB | CAG | 119.9° | 120.1° |
CAA | CAB | HAB | 120.0° | 119.9° |
CAC | CAE | CAF | 118.5° | 119.9° |
CAE | CAC | HAC | 119.0° | 119.9° |
CAC | CAE | HAE | 120.7° | 120.1° |
CAE | CAF | CAG | 120.3° | 119.8° |
CAE | CAF | CAH | 116.4° | 120.1° |
CAF | CAE | HAE | 120.7° | 120.1° |
CAB | CAG | CAF | 120.5° | 119.9° |
CAG | CAB | HAB | 120.0° | 119.9° |
CAB | CAG | HAG | 119.7° | 120.1° |
CAG | CAF | CAH | 123.3° | 120.1° |
CAF | CAG | HAG | 119.8° | 120.1° |
CAF | CAH | CAI | 131.1° | 120.0° |
CAF | CAH | HAH | 114.5° | 120.0° |
CAH | CAI | SBG | 127.9° | 127.9° |
CAH | CAI | CAK | 124.2° | 128.0° |
CAI | CAH | HAH | 114.4° | 120.0° |
SBG | CAI | CAK | 107.7° | 104.1° |
CAI | SBG | CAL | 90.5° | 94.5° |
CAI | CAK | NAX | 117.8° | 115.0° |
CAI | CAK | OBE | 120.1° | 122.5° |
SBG | CAL | NAX | 117.1° | 106.9° |
SBG | CAL | OBH | 123.4° | 126.5° |
NAX | CAL | OBH | 119.2° | 126.6° |
CAL | NAX | CAK | 106.6° | 119.5° |
CAL | NAX | HAX | 126.7° | 120.2° |
NAX | CAK | OBE | 121.8° | 122.5° |
CAK | NAX | HAX | 126.7° | 120.3° |
HG1C | CG | HG2C | 110.4° | 109.5° |
HB1C | CB | HB2C | 107.2° | 109.5° |
HAN1 | CAN | HAN2 | 112.9° | 109.5° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
OE1 | CD | OE2 | CG | 174.0° | 179.9° |
OE1 | CD | CG | CB | 15.9° | 180.0° |
OE1 | CD | CG | HG1C | 135.9° | 60.1° |
OE1 | CD | CG | HG2C | 103.7° | 59.9° |
OE2 | CD | CG | CB | 170.1° | 0.1° |
OE2 | CD | OE1 | HE1 | 0.0° | 0.1° |
OE2 | CD | CG | HG1C | 50.1° | 120.0° |
OE2 | CD | CG | HG2C | 70.3° | 120.0° |
CD | CG | CB | HG1C | 120.0° | 119.9° |
CD | CG | CB | HG2C | 119.6° | 120.0° |
CD | CG | CB | CA | 177.6° | 180.0° |
CG | CD | OE1 | HE1 | 173.3° | 180.0° |
CD | CG | HG1C | HG2C | 119.5° | 120.0° |
CD | CG | CB | HB1C | 57.6° | 60.0° |
CD | CG | CB | HB2C | 61.2° | 60.0° |
CG | CB | CA | HB1C | 120.0° | 120.0° |
CG | CB | CA | HB2C | 121.1° | 120.0° |
CG | CB | CA | C | 78.4° | 175.0° |
CG | CB | CA | N | 163.2° | 65.0° |
CB | CG | HG1C | HG2C | 119.5° | 120.0° |
CG | CB | HB1C | HB2C | 121.2° | 120.0° |
CG | CB | CA | HA | 40.5° | 55.0° |
CB | CA | C | OXT | 81.8° | 120.0° |
CB | CA | C | O | 106.7° | 60.0° |
CB | CA | C | N | 115.9° | 120.0° |
CB | CA | C | HA | 121.3° | 120.1° |
CB | CA | N | CAU | 164.2° | 155.0° |
CB | CA | N | HA | 121.1° | 120.1° |
CA | CB | CG | HG1C | 62.4° | 60.0° |
CA | CB | CG | HG2C | 58.1° | 60.0° |
CA | CB | HB1C | HB2C | 121.2° | 120.0° |
CB | CA | N | HB | 15.8° | 25.0° |
OXT | C | O | CA | 172.0° | 180.0° |
OXT | C | CA | N | 34.1° | 0.0° |
OXT | C | CA | HA | 156.9° | 120.0° |
OXT | C | O | H | 0.0° | 0.0° |
O | C | CA | N | 137.4° | 180.0° |
O | C | CA | HA | 14.6° | 60.1° |
C | CA | N | CAU | 75.7° | 85.0° |
C | CA | N | HA | 118.9° | 119.9° |
C | CA | CB | HB1C | 161.6° | 65.0° |
C | CA | CB | HB2C | 42.7° | 55.0° |
CA | C | O | H | 172.1° | 180.0° |
C | CA | N | HB | 104.2° | 95.0° |
CAU | N | CA | HB | 180.0° | 180.0° |
N | CAU | OBC | CAT | 173.9° | 180.0° |
N | CAU | CAT | CAQ | 33.1° | 180.0° |
N | CAU | CAT | CAS | 152.0° | 0.3° |
CAU | N | CA | HA | 43.1° | 34.9° |
CA | N | CAU | OBC | 17.7° | 0.0° |
CA | N | CAU | CAT | 167.6° | 180.0° |
N | CA | CB | HB1C | 43.2° | 55.0° |
N | CA | CB | HB2C | 75.7° | 175.0° |
OBC | CAU | CAT | CAQ | 152.4° | 0.0° |
OBC | CAU | CAT | CAS | 22.5° | 179.7° |
OBC | CAU | N | HB | 162.3° | 180.0° |
CAU | CAT | CAQ | CAS | 174.9° | 179.8° |
CAU | CAT | CAQ | CAO | 175.4° | 180.0° |
CAU | CAT | CAS | CAR | 175.3° | 180.0° |
CAT | CAU | N | HB | 12.4° | 0.0° |
CAU | CAT | CAQ | HAQ | 4.6° | 0.0° |
CAU | CAT | CAS | HAS | 4.7° | 0.0° |
CAT | CAQ | CAO | HAQ | 180.0° | 180.0° |
CAQ | CAT | CAS | CAR | 0.5° | 0.2° |
CAT | CAQ | CAO | CAP | 0.1° | 0.1° |
CAT | CAQ | CAO | CAN | 173.3° | 180.0° |
CAQ | CAT | CAS | HAS | 179.5° | 179.8° |
CAS | CAT | CAQ | CAO | 0.6° | 0.2° |
CAT | CAS | CAR | HAS | 180.0° | 180.0° |
CAT | CAS | CAR | CAP | 0.3° | 0.0° |
CAS | CAT | CAQ | HAQ | 179.5° | 179.8° |
CAT | CAS | CAR | HAR | 179.8° | 180.0° |
CAQ | CAO | CAP | CAR | 0.9° | 0.3° |
CAQ | CAO | CAP | CAN | 173.4° | 179.9° |
CAQ | CAO | CAN | NAY | 143.8° | 90.0° |
CAQ | CAO | CAP | HAP | 179.1° | 180.0° |
CAQ | CAO | CAN | HAN1 | 23.8° | 150.0° |
CAQ | CAO | CAN | HAN2 | 98.1° | 29.9° |
CAS | CAR | CAP | HAR | 180.0° | 180.0° |
CAS | CAR | CAP | CAO | 0.9° | 0.2° |
CAS | CAR | CAP | HAP | 179.1° | 179.9° |
CAR | CAP | CAO | HAP | 180.0° | 179.7° |
CAR | CAP | CAO | CAN | 174.3° | 179.8° |
CAP | CAR | CAS | HAS | 179.8° | 180.0° |
CAP | CAO | CAN | NAY | 42.9° | 90.0° |
CAP | CAO | CAQ | HAQ | 179.9° | 180.0° |
CAO | CAP | CAR | HAR | 179.1° | 179.7° |
CAP | CAO | CAN | HAN1 | 162.9° | 30.0° |
CAP | CAO | CAN | HAN2 | 75.2° | 150.0° |
CAO | CAN | NAY | HAN1 | 120.0° | 120.0° |
CAO | CAN | NAY | HAN2 | 118.1° | 120.0° |
CAO | CAN | NAY | CAA | 62.8° | 180.0° |
CAN | CAO | CAQ | HAQ | 6.7° | 0.0° |
CAN | CAO | CAP | HAP | 5.7° | 0.1° |
CAO | CAN | HAN1 | HAN2 | 118.2° | 120.1° |
CAO | CAN | NAY | HAY | 177.2° | 0.0° |
CAN | NAY | CAA | HAY | 120.0° | 180.0° |
CAN | NAY | CAA | CAC | 1.1° | 180.0° |
CAN | NAY | CAA | CAB | 178.9° | 0.3° |
NAY | CAN | HAN1 | HAN2 | 118.2° | 119.9° |
NAY | CAA | CAC | CAB | 177.8° | 179.7° |
NAY | CAA | CAC | CAE | 174.5° | 180.0° |
NAY | CAA | CAB | CAG | 175.3° | 180.0° |
CAA | NAY | CAN | HAN1 | 57.2° | 60.0° |
CAA | NAY | CAN | HAN2 | 179.1° | 60.0° |
NAY | CAA | CAC | HAC | 5.6° | 0.0° |
NAY | CAA | CAB | HAB | 4.7° | 0.0° |
CAA | CAC | CAE | HAC | 180.0° | 180.0° |
CAA | CAC | CAE | CAF | 0.7° | 0.0° |
CAC | CAA | CAB | CAG | 2.6° | 0.3° |
CAC | CAA | NAY | HAY | 121.1° | 0.0° |
CAC | CAA | CAB | HAB | 177.4° | 179.7° |
CAA | CAC | CAE | HAE | 179.3° | 180.0° |
CAB | CAA | CAC | CAE | 3.4° | 0.3° |
CAA | CAB | CAG | HAB | 180.0° | 180.0° |
CAA | CAB | CAG | CAF | 0.7° | 0.0° |
CAB | CAA | NAY | HAY | 61.1° | 179.7° |
CAB | CAA | CAC | HAC | 176.6° | 179.7° |
CAA | CAB | CAG | HAG | 179.3° | 180.0° |
CAC | CAE | CAF | HAE | 180.0° | 180.0° |
CAC | CAE | CAF | CAG | 2.8° | 0.3° |
CAC | CAE | CAF | CAH | 177.8° | 180.0° |
CAE | CAF | CAG | CAB | 3.5° | 0.3° |
CAE | CAF | CAG | CAH | 179.4° | 179.7° |
CAE | CAF | CAH | CAI | 163.9° | 158.9° |
CAF | CAE | CAC | HAC | 179.3° | 180.0° |
CAE | CAF | CAG | HAG | 176.5° | 179.7° |
CAE | CAF | CAH | HAH | 16.1° | 21.1° |
CAB | CAG | CAF | HAG | 180.0° | 180.0° |
CAB | CAG | CAF | CAH | 177.1° | 180.0° |
CAG | CAF | CAH | CAI | 16.6° | 21.4° |
CAF | CAG | CAB | HAB | 179.3° | 180.0° |
CAG | CAF | CAE | HAE | 177.2° | 179.8° |
CAG | CAF | CAH | HAH | 163.3° | 158.6° |
CAF | CAH | CAI | HAH | 180.0° | 180.0° |
CAF | CAH | CAI | SBG | 3.4° | 7.5° |
CAF | CAH | CAI | CAK | 171.7° | 172.7° |
CAH | CAF | CAE | HAE | 2.2° | 0.0° |
CAH | CAF | CAG | HAG | 2.9° | 0.0° |
CAH | CAI | SBG | CAK | 175.7° | 179.8° |
CAH | CAI | SBG | CAL | 179.3° | 180.0° |
CAH | CAI | CAK | NAX | 179.9° | 179.8° |
CAH | CAI | CAK | OBE | 6.2° | 0.1° |
CAI | SBG | CAL | NAX | 5.3° | 0.0° |
CAI | SBG | CAL | OBH | 178.2° | 180.0° |
SBG | CAI | CAK | NAX | 4.1° | 0.4° |
SBG | CAI | CAK | OBE | 177.8° | 179.7° |
SBG | CAI | CAH | HAH | 176.6° | 172.5° |
CAK | CAI | SBG | CAL | 4.9° | 0.2° |
CAI | CAK | NAX | CAL | 0.4° | 0.5° |
CAI | CAK | NAX | OBE | 173.6° | 179.9° |
CAK | CAI | CAH | HAH | 8.3° | 7.3° |
CAI | CAK | NAX | HAX | 179.5° | 179.8° |
SBG | CAL | NAX | OBH | 173.2° | 180.0° |
SBG | CAL | NAX | CAK | 3.7° | 0.3° |
SBG | CAL | NAX | HAX | 176.3° | 180.0° |
CAL | NAX | CAK | HAX | 180.0° | 179.7° |
CAL | NAX | CAK | OBE | 174.1° | 179.6° |
OBH | CAL | NAX | CAK | 176.9° | 179.7° |
OBH | CAL | NAX | HAX | 3.1° | 0.0° |
OBE | CAK | NAX | HAX | 5.9° | 0.1° |
HG1C | CG | CB | HB1C | 177.6° | 179.9° |
HG1C | CG | CB | HB2C | 58.7° | 60.0° |
HG2C | CG | CB | HB1C | 61.9° | 60.0° |
HG2C | CG | CB | HB2C | 179.2° | 180.0° |
HB1C | CB | CA | HA | 79.5° | 175.0° |
HB2C | CB | CA | HA | 161.7° | 65.0° |
HA | CA | N | HB | 136.9° | 145.1° |
HAS | CAS | CAR | HAR | 0.2° | 0.0° |
HAR | CAR | CAP | HAP | 0.9° | 0.0° |
HAN1 | CAN | NAY | HAY | 62.8° | 120.1° |
HAN2 | CAN | NAY | HAY | 59.1° | 120.0° |
HAC | CAC | CAE | HAE | 0.7° | 0.0° |
HAB | CAB | CAG | HAG | 0.7° | 0.0° |