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SummaryGeometryRelated PDB entries

VRO

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
CAAOANsing1.43Å1.50Å
CAICAGdoub1.38Å1.38ÅAromatic
CAICAQsing1.39Å1.39ÅAromatic
CAGCAPsing1.38Å1.40ÅAromatic
OANCAQsing1.36Å1.40Å
CAQCAHdoub1.39Å1.40ÅAromatic
CAPCAJsing1.51Å1.37Å
CAPCAFdoub1.38Å1.40ÅAromatic
CAJCAKsing1.53Å1.48Å
CAFCAHsing1.38Å1.42ÅAromatic
CAKCASsing1.51Å1.49Å
OADCAUdoub1.22Å1.22Å
CASCAUsing1.47Å1.41Å
CASCARdoub1.36Å1.37Å
CAUNAMsing1.35Å1.41Å
CARCAOsing1.48Å1.47Å
CARNALsing1.38Å1.42Å
OABCAOdoub1.21Å1.26Å
NAMCATsing1.34Å1.35Å
CAOOAEsing1.35Å1.25Å
NALCATsing1.34Å1.37Å
CATOACdoub1.22Å1.27Å
OAEH1sing0.97Å0.95Å
NAMH2sing0.97Å1.00Å
CAKH4sing1.09Å1.10Å
CAKH5sing1.09Å1.10Å
CAJH6sing1.09Å1.10Å
CAJH7sing1.09Å1.10Å
CAFH8sing1.08Å1.08Å
CAHH9sing1.08Å1.08Å
CAAH10sing1.09Å1.10Å
CAAH11sing1.09Å1.10Å
CAAH12sing1.09Å1.10Å
CAIH13sing1.08Å1.08Å
CAGH14sing1.08Å1.08Å
NALH15sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
CAAOANCAQ118.7°117.0°
OANCAAH10109.5°109.5°
OANCAAH11109.5°109.5°
OANCAAH12109.5°109.5°
CAGCAICAQ124.7°120.0°
CAICAGCAP118.4°120.0°
CAGCAIH13117.7°120.0°
CAICAGH14120.8°120.0°
CAICAQOAN117.2°120.1°
CAICAQCAH118.4°119.9°
CAQCAIH13117.7°120.0°
CAGCAPCAJ115.7°120.0°
CAGCAPCAF117.3°120.1°
CAPCAGH14120.8°119.9°
OANCAQCAH124.1°120.0°
CAQCAHCAF116.4°119.9°
CAQCAHH9121.8°120.1°
CAJCAPCAF127.0°119.9°
CAPCAJCAK110.4°109.5°
CAPCAJH6109.2°109.5°
CAPCAJH7109.2°109.5°
CAPCAFCAH124.6°120.1°
CAPCAFH8117.7°120.0°
CAJCAKCAS112.5°109.5°
CAJCAKH4108.7°109.5°
CAJCAKH5108.7°109.4°
CAKCAJH6109.2°109.5°
CAKCAJH7109.2°109.4°
CAHCAFH8117.7°119.9°
CAFCAHH9121.8°120.0°
CAKCASCAU118.3°120.8°
CAKCASCAR121.6°120.8°
CASCAKH4108.7°109.5°
CASCAKH5108.7°109.5°
OADCAUCAS125.6°120.6°
OADCAUNAM116.8°120.6°
CAUCASCAR120.1°118.4°
CASCAUNAM117.1°118.9°
CASCARCAO125.6°120.3°
CASCARNAL120.2°119.4°
CAUNAMCAT122.5°120.4°
CAUNAMH2118.7°119.8°
CAOCARNAL114.2°120.3°
CARCAOOAB118.4°120.0°
CARCAOOAE116.3°120.0°
CARNALCAT119.9°121.2°
CARNALH15120.1°119.4°
OABCAOOAE125.3°120.0°
NAMCATNAL119.8°121.8°
NAMCATOAC118.4°119.1°
CATNAMH2118.7°119.8°
CAOOAEH1109.5°117.0°
NALCATOAC121.3°119.1°
CATNALH15120.0°119.4°
H4CAKH5109.4°109.5°
H6CAJH7109.5°109.4°
H10CAAH11109.5°109.5°
H10CAAH12109.4°109.5°
H11CAAH12109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
CAAOANCAQCAI18.7°0.0°
CAAOANCAQCAH154.9°180.0°
OANCAAH10H11120.0°120.0°
OANCAAH10H12120.0°120.0°
OANCAAH11H12120.0°120.0°
CAGCAICAQH13180.0°179.5°
CAICAGCAPH14180.0°179.5°
CAGCAICAQOAN178.4°179.7°
CAGCAICAQCAH4.5°0.3°
CAICAGCAPCAJ179.7°179.7°
CAICAGCAPCAF1.5°0.5°
CAQCAICAGCAP2.9°0.5°
CAICAQOANCAH173.6°180.0°
CAICAQCAHCAF1.5°0.0°
CAICAQCAHH9178.5°180.0°
CAQCAICAGH14177.1°180.0°
CAGCAPCAJCAF178.7°179.7°
CAGCAPCAJCAK114.6°90.3°
CAGCAPCAFCAH4.4°0.3°
CAGCAPCAJH65.6°149.7°
CAGCAPCAJH7125.2°29.7°
CAGCAPCAFH8175.6°179.7°
CAPCAGCAIH13177.1°179.9°
OANCAQCAHCAF175.0°180.0°
OANCAQCAHH95.0°0.0°
CAQOANCAAH10180.0°60.0°
CAQOANCAAH1160.0°180.0°
CAQOANCAAH1260.0°60.0°
OANCAQCAIH131.5°0.2°
CAQCAHCAFCAP2.9°0.0°
CAQCAHCAFH9180.0°180.0°
CAQCAHCAFH8177.2°180.0°
CAHCAQCAIH13175.5°179.8°
CAPCAJCAKH6120.1°120.1°
CAPCAJCAKH7120.1°120.0°
CAJCAPCAFCAH176.9°180.0°
CAPCAJCAKCAS58.0°180.0°
CAPCAJCAKH4178.4°59.9°
CAPCAJCAKH562.5°60.0°
CAPCAJH6H7119.5°120.0°
CAJCAPCAFH83.0°0.0°
CAJCAPCAGH140.3°0.2°
CAFCAPCAJCAK66.7°90.0°
CAPCAFCAHH8180.0°180.0°
CAFCAPCAJH6173.1°30.0°
CAFCAPCAJH753.4°150.0°
CAPCAFCAHH9177.1°180.0°
CAFCAPCAGH14178.5°179.9°
CAJCAKCASH4120.5°120.0°
CAJCAKCASH5120.5°120.0°
CAJCAKCASCAU67.8°88.2°
CAJCAKCASCAR114.8°91.3°
CAJCAKH4H5118.6°119.9°
CAKCAJH6H7119.6°119.9°
CAKCASCAUOAD5.2°0.2°
CAKCASCAUCAR177.5°179.5°
CAKCASCAUNAM176.6°180.0°
CAKCASCARCAO3.3°0.2°
CAKCASCARNAL179.7°180.0°
CASCAKH4H5118.6°120.0°
CASCAKCAJH662.2°59.9°
CASCAKCAJH7178.1°60.0°
OADCAUCASNAM171.4°179.8°
OADCAUCASCAR177.3°179.7°
OADCAUNAMCAT179.9°180.0°
OADCAUNAMH20.1°0.1°
CAUCASCARCAO179.3°179.8°
CAUCASCARNAL2.9°0.5°
CASCAUNAMCAT7.7°0.2°
CASCAUNAMH2172.3°179.8°
CAUCASCAKH452.7°31.8°
CAUCASCAKH5171.7°151.8°
CARCASCAUNAM5.9°0.5°
CASCARCAONAL176.5°179.7°
CASCARCAOOAB53.0°6.3°
CASCARCAOOAE128.6°173.4°
CASCARNALCAT1.3°0.3°
CARCASCAKH4124.8°148.6°
CARCASCAKH55.7°28.6°
CASCARNALH15178.7°179.7°
CAUNAMCATH2180.0°180.0°
CAUNAMCATNAL6.3°0.0°
CAUNAMCATOAC178.4°179.9°
CARCAOOABOAE178.2°179.7°
CAOCARNALCAT178.0°180.0°
CARCAOOAEH1178.3°179.7°
CAOCARNALH152.0°0.0°
NALCARCAOOAB130.5°174.0°
CARNALCATNAM2.9°0.0°
NALCARCAOOAE47.9°6.3°
CARNALCATH15180.0°180.0°
CARNALCATOAC174.8°180.0°
OABCAOOAEH10.0°0.0°
NAMCATNALOAC171.9°179.9°
NAMCATNALH15177.1°180.0°
NALCATNAMH2173.7°180.0°
OACCATNAMH21.6°0.0°
OACCATNALH155.2°0.1°
H4CAKCAJH658.3°180.0°
H4CAKCAJH761.4°60.1°
H5CAKCAJH6177.4°60.1°
H5CAKCAJH757.6°180.0°
H8CAFCAHH92.8°0.0°
H10CAAH11H12120.0°120.0°
H13CAICAGH142.9°0.4°

246704

PDB entries from 2025-12-24

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