Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

VRH

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O3Nsing1.42Å1.35Å
O3C10sing1.43Å1.40Å
NC9sing1.35Å1.41Å
C7Osing1.43Å1.31Å
C9O2doub1.21Å1.20Å
C9C8sing1.51Å1.53Å
C8O1sing1.43Å1.41Å
OC5sing1.36Å1.35Å
C6C5doub1.39Å1.37ÅAromatic
C6C1sing1.38Å1.36ÅAromatic
C5C4sing1.39Å1.35ÅAromatic
CC1sing1.51Å1.48Å
C1C2doub1.38Å1.36ÅAromatic
O1C4sing1.36Å1.33Å
C4C3doub1.39Å1.38ÅAromatic
C2C3sing1.38Å1.36ÅAromatic
C7H1sing1.09Å1.10Å
C7H2sing1.09Å1.10Å
C7H3sing1.09Å1.10Å
C8H4sing1.09Å1.10Å
C8H5sing1.09Å1.10Å
C6H6sing1.08Å1.08Å
C3H7sing1.08Å1.08Å
C2H8sing1.08Å1.08Å
NH9sing0.97Å1.00Å
C10H10sing1.09Å1.10Å
C10H11sing1.09Å1.10Å
C10H12sing1.09Å1.10Å
CH13sing1.09Å1.10Å
CH14sing1.09Å1.10Å
CH15sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
NO3C10114.1°114.0°
O3NC9113.4°120.0°
O3NH9123.3°120.0°
O3C10H10109.5°109.5°
O3C10H11109.5°109.5°
O3C10H12109.5°109.5°
NC9O2121.7°120.0°
NC9C8112.2°120.0°
C9NH9123.3°120.0°
C7OC5111.0°117.0°
OC7H1109.5°109.5°
OC7H2109.5°109.5°
OC7H3109.5°109.5°
O2C9C8126.1°120.0°
C9C8O1116.0°109.5°
C9C8H4107.8°109.5°
C9C8H5107.8°109.5°
C8O1C4107.9°117.0°
O1C8H4107.8°109.5°
O1C8H5107.8°109.5°
OC5C6119.9°120.1°
OC5C4119.1°120.1°
C5C6C1118.9°120.0°
C6C5C4120.3°119.9°
C5C6H6120.5°120.0°
C6C1C118.9°119.9°
C6C1C2120.9°120.1°
C1C6H6120.6°120.0°
C5C4O1115.8°120.1°
C5C4C3120.3°119.9°
CC1C2120.2°119.9°
C1CH13109.5°109.5°
C1CH14109.5°109.5°
C1CH15109.5°109.5°
C1C2C3119.7°120.1°
C1C2H8120.2°120.0°
O1C4C3123.5°120.0°
C4C3C2119.6°120.0°
C4C3H7120.2°120.0°
C2C3H7120.2°120.0°
C3C2H8120.2°119.9°
H1C7H2109.4°109.4°
H1C7H3109.5°109.5°
H2C7H3109.4°109.5°
H4C8H5109.5°109.4°
H10C10H11109.5°109.4°
H10C10H12109.5°109.5°
H11C10H12109.5°109.4°
H13CH14109.5°109.5°
H13CH15109.4°109.5°
H14CH15109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O3NC9H9180.0°180.0°
O3NC9O2147.0°0.0°
O3NC9C832.5°180.0°
NO3C10H10180.0°179.9°
NO3C10H1160.0°60.0°
NO3C10H1260.0°60.0°
C10O3NC969.3°180.0°
C10O3NH9110.6°0.0°
O3C10H10H11120.0°120.0°
O3C10H10H12120.0°120.1°
O3C10H11H12120.0°120.0°
NC9O2C8179.5°180.0°
NC9C8O1174.4°180.0°
NC9C8H464.6°60.0°
NC9C8H553.5°60.0°
C7OC5C660.1°0.0°
C7OC5C4129.4°180.0°
OC7H1H2120.0°120.0°
OC7H1H3120.0°120.0°
OC7H2H3120.0°120.0°
O2C9C8O15.1°0.0°
O2C9C8H4115.8°120.0°
O2C9C8H5126.1°120.0°
O2C9NH932.9°180.0°
C9C8O1H4121.0°120.0°
C9C8O1H5120.9°120.0°
C9C8O1C4136.4°180.0°
C9C8H4H5117.0°119.9°
C8C9NH9147.5°0.0°
C8O1C4C555.4°180.0°
C8O1C4C3117.3°0.0°
O1C8H4H5117.0°120.0°
OC5C6C4170.4°180.0°
OC5C6C1164.7°180.0°
OC5C4O123.0°0.0°
OC5C4C3164.0°180.0°
C5OC7H1180.0°180.0°
C5OC7H260.0°60.1°
C5OC7H360.0°60.0°
OC5C6H615.3°0.0°
C5C6C1H6180.0°180.0°
C5C6C1C177.3°179.7°
C5C6C1C21.5°0.0°
C6C5C4O1166.5°180.0°
C6C5C4C36.5°0.0°
C1C6C5C45.7°0.0°
C6C1CC2178.8°179.7°
C6C1C2C31.8°0.0°
C6C1C2H8178.2°180.0°
C6C1CH1390.6°89.7°
C6C1CH14149.4°30.3°
C6C1CH1529.4°150.3°
C5C4O1C3172.8°180.0°
C5C4C3C23.1°0.0°
C4C5C6H6174.3°180.0°
C5C4C3H7177.0°179.9°
CC1C2C3179.4°179.7°
CC1C6H62.7°0.3°
CC1C2H80.6°0.3°
C1CH13H14120.0°120.0°
C1CH13H15120.0°120.0°
C1CH14H15120.0°120.0°
C1C2C3C41.1°0.0°
C1C2C3H8180.0°180.0°
C2C1C6H6178.5°180.0°
C1C2C3H7178.9°179.9°
C2C1CH1390.6°90.0°
C2C1CH1429.4°150.0°
C2C1CH15149.4°30.0°
O1C4C3C2169.4°180.0°
C4O1C8H415.5°60.0°
C4O1C8H5102.6°60.0°
O1C4C3H710.6°0.0°
C4C3C2H7180.0°179.9°
C4C3C2H8178.9°180.0°
H1C7H2H3120.0°120.0°
H7C3C2H81.1°0.1°
H10C10H11H12120.0°119.9°
H13CH14H15120.0°120.0°

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon