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VRC

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
ONdoub1.22Å1.19Å
NO1doub1.22Å1.20Å
NC5sing1.47Å1.45Å
C4C5sing1.50Å1.38Å
C4C3doub1.32Å1.38Å
C5Csing1.50Å1.40Å
C6C3sing1.51Å1.49Å
C6N1sing1.47Å1.54Å
C3C2sing1.48Å1.43Å
CC1doub1.33Å1.35Å
C2C1sing1.48Å1.42Å
C2O2doub1.22Å1.25Å
N1H1sing1.01Å1.00Å
N1H2sing1.01Å1.00Å
C1H4sing1.08Å1.08Å
C5H5sing1.09Å1.10Å
C6H6sing1.09Å1.10Å
C6H7sing1.09Å1.10Å
C4H8sing1.08Å1.08Å
CH9sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
ONO1122.0°120.0°
ONC5119.5°120.0°
O1NC5118.5°120.0°
NC5C4119.8°108.7°
NC5C118.8°108.8°
NC5H590.0°108.7°
C5C4C3119.3°123.1°
C4C5C121.4°113.0°
C4C5H590.0°108.8°
C5C4H8120.3°118.5°
C4C3C6120.6°120.3°
C4C3C2120.5°119.5°
C3C4H8120.4°118.5°
C5CC1119.8°123.1°
CC5H590.0°108.8°
C5CH9120.1°118.5°
C3C6N1108.3°109.5°
C6C3C2118.9°120.2°
C3C6H6109.8°109.5°
C3C6H7109.8°109.5°
C6N1H1109.5°111.1°
C6N1H2109.4°111.0°
N1C6H6109.8°109.4°
N1C6H7109.7°109.5°
C3C2C1118.2°117.7°
C3C2O2120.3°121.1°
CC1C2120.8°119.4°
CC1H4119.6°120.4°
C1CH9120.1°118.5°
C1C2O2121.5°121.2°
C2C1H4119.6°120.2°
H1N1H2109.5°111.0°
H6C6H7109.4°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
ONO1C5178.2°179.9°
ONC5C42.0°63.4°
ONC5C178.0°60.1°
ONC5H588.0°178.4°
O1NC5C4176.2°116.5°
O1NC5C3.7°120.0°
O1NC5H593.8°1.7°
NC5C4C179.9°120.9°
NC5C4H590.0°118.2°
NC5C4C3179.4°137.2°
NC5CH590.0°118.2°
NC5CC1179.6°137.5°
NC5C4H80.6°42.4°
NC5CH90.4°42.5°
C5C4C3H8180.0°179.7°
C4C5CH590.0°120.9°
C5C4C3C6179.9°179.4°
C5C4C3C20.2°0.3°
C4C5CC10.4°16.6°
C4C5CH9179.6°163.3°
C3C4C5C0.6°16.4°
C4C3C6C2179.9°179.7°
C4C3C6N1109.7°95.0°
C4C3C2C10.3°16.6°
C4C3C2O2179.4°163.3°
C3C4C5H590.6°104.6°
C4C3C6H610.1°25.0°
C4C3C6H7130.4°145.0°
C5CC1H9180.0°180.0°
C5CC1C20.2°0.8°
C5CC1H4179.8°179.3°
CC5C4H8179.5°163.3°
C3C6N1H6119.8°120.0°
C3C6N1H7119.8°120.1°
C6C3C2C1179.6°163.7°
C6C3C2O20.6°16.4°
C3C6N1H1180.0°180.0°
C3C6N1H260.0°56.0°
C3C6H6H7120.5°120.0°
C6C3C4H80.1°1.0°
N1C6C3C270.3°84.7°
C6N1H1H2120.0°124.0°
N1C6H6H7120.5°120.0°
C3C2C1C0.5°16.3°
C3C2C1O2179.8°180.0°
C3C2C1H4179.5°163.5°
C2C3C6H6169.8°155.3°
C2C3C6H749.5°35.3°
C2C3C4H8179.8°179.3°
CC1C2H4180.0°179.8°
CC1C2O2179.2°163.6°
C1CC5H590.4°104.3°
C2C1CH9179.8°179.1°
O2C2C1H40.8°16.6°
H1N1C6H660.1°60.0°
H1N1C6H760.2°59.9°
H2N1C6H6179.8°64.0°
H2N1C6H759.8°176.0°
H4C1CH90.2°0.7°
H5C5C4H889.4°75.8°
H5C5CH989.6°75.8°

250059

PDB entries from 2026-03-04

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