VPC

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
C24	C23	doub	0.00Å	1.40Å	Aromatic
C24	C6	sing	0.00Å	1.34Å	Aromatic
C23	C22	sing	0.00Å	1.40Å	Aromatic
C22	C21	doub	0.00Å	1.39Å	Aromatic
C21	C5	sing	0.00Å	1.35Å	Aromatic
C5	C6	doub	0.00Å	1.36Å	Aromatic
C5	C8	sing	0.00Å	1.34Å
C6	C7	sing	0.00Å	1.33Å
C7	N3	doub	0.00Å	1.41Å
C7	N2	sing	0.00Å	1.30Å
N3	C4	sing	0.00Å	1.43Å
C4	N1	doub	0.00Å	1.34Å
C4	C1	sing	0.00Å	1.33Å
N1	C3	sing	0.00Å	1.31Å
N1	GA	sing	0.00Å	2.29Å
C1	C25	sing	0.00Å	1.34Å	Aromatic
C1	C2	doub	0.00Å	1.36Å	Aromatic
C25	C26	doub	0.00Å	1.39Å	Aromatic
C26	C27	sing	0.00Å	1.40Å	Aromatic
C27	C28	doub	0.00Å	1.39Å	Aromatic
C28	C2	sing	0.00Å	1.33Å	Aromatic
C2	C3	sing	0.00Å	1.33Å
C3	N7	doub	0.00Å	1.42Å
N7	C16	sing	0.00Å	1.42Å
C16	N6	sing	0.00Å	1.31Å	Aromatic
C16	C13	doub	0.00Å	1.33Å	Aromatic
N6	C15	sing	0.00Å	1.32Å	Aromatic
N6	GA	sing	0.00Å	2.29Å
C13	C29	sing	0.00Å	1.33Å	Aromatic
C13	C14	sing	0.00Å	1.36Å	Aromatic
C29	C30	doub	0.00Å	1.38Å	Aromatic
C30	C31	sing	0.00Å	1.38Å	Aromatic
C31	C32	doub	0.00Å	1.39Å	Aromatic
C32	C14	sing	0.00Å	1.33Å	Aromatic
C14	C15	doub	0.00Å	1.33Å	Aromatic
C15	N8	sing	0.00Å	1.44Å
N8	C12	doub	0.00Å	1.46Å
C12	N4	sing	0.00Å	1.33Å
C12	C9	sing	0.00Å	1.34Å
N4	C11	doub	0.00Å	1.32Å
N4	GA	sing	0.00Å	2.15Å
C9	C17	sing	0.00Å	1.35Å	Aromatic
C9	C10	doub	0.00Å	1.35Å	Aromatic
C17	C18	doub	0.00Å	1.39Å	Aromatic
C18	C19	sing	0.00Å	1.40Å	Aromatic
C19	C20	doub	0.00Å	1.40Å	Aromatic
C20	C10	sing	0.00Å	1.34Å	Aromatic
C10	C11	sing	0.00Å	1.34Å
C11	N5	sing	0.00Å	1.44Å
N5	C8	doub	0.00Å	1.43Å
C8	N2	sing	0.00Å	1.32Å
N2	GA	sing	0.00Å	2.32Å
C24	H1	sing	0.00Å	1.08Å
C23	H2	sing	0.00Å	1.08Å
C22	H3	sing	0.00Å	1.08Å
C21	H4	sing	0.00Å	1.08Å
C25	H5	sing	0.00Å	1.08Å
C26	H6	sing	0.00Å	1.08Å
C27	H7	sing	0.00Å	1.08Å
C28	H8	sing	0.00Å	1.08Å
C29	H9	sing	0.00Å	1.08Å
C30	H10	sing	0.00Å	1.08Å
C31	H11	sing	0.00Å	1.08Å
C32	H12	sing	0.00Å	1.08Å
C17	H13	sing	0.00Å	1.08Å
C18	H14	sing	0.00Å	1.08Å
C19	H15	sing	0.00Å	1.08Å
C20	H16	sing	0.00Å	1.08Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
C23	C24	C6	119.9°	90.0°
C24	C23	C22	119.4°	90.0°
C23	C24	H1	120.0°	90.0°
C24	C23	H2	120.3°	90.0°
C24	C6	C5	120.9°	90.0°
C24	C6	C7	130.7°	90.0°
C6	C24	H1	120.0°	90.0°
C23	C22	C21	118.2°	90.0°
C22	C23	H2	120.3°	90.0°
C23	C22	H3	120.9°	90.0°
C22	C21	C5	120.8°	90.0°
C21	C22	H3	120.9°	90.0°
C22	C21	H4	119.6°	90.0°
C21	C5	C6	120.7°	90.0°
C21	C5	C8	130.8°	90.0°
C5	C21	H4	119.6°	90.0°
C6	C5	C8	108.5°	90.0°
C5	C6	C7	108.3°	90.0°
C5	C8	N5	131.3°	90.0°
C5	C8	N2	103.7°	90.0°
C6	C7	N3	132.5°	90.0°
C6	C7	N2	104.8°	90.0°
N3	C7	N2	122.7°	90.0°
C7	N3	C4	135.0°	90.0°
C7	N2	C8	114.6°	90.0°
C7	N2	GA	125.7°	90.0°
N3	C4	N1	126.8°	90.0°
N3	C4	C1	128.7°	90.0°
N1	C4	C1	104.5°	90.0°
C4	N1	C3	113.4°	90.0°
C4	N1	GA	121.6°	90.0°
C4	C1	C25	129.7°	90.0°
C4	C1	C2	108.1°	90.0°
C3	N1	GA	124.8°	90.0°
N1	C3	C2	104.6°	90.0°
N1	C3	N7	124.9°	90.0°
N1	GA	N6	86.7°	90.0°
N1	GA	N4	176.5°	90.0°
N1	GA	N2	87.9°	90.0°
C25	C1	C2	122.3°	90.0°
C1	C25	C26	119.3°	90.0°
C1	C25	H5	120.4°	90.0°
C1	C2	C28	120.4°	90.0°
C1	C2	C3	109.4°	90.0°
C25	C26	C27	118.4°	90.0°
C26	C25	H5	120.4°	90.0°
C25	C26	H6	120.8°	90.0°
C26	C27	C28	119.7°	90.0°
C27	C26	H6	120.8°	90.0°
C26	C27	H7	120.2°	90.0°
C27	C28	C2	119.9°	90.0°
C28	C27	H7	120.1°	90.0°
C27	C28	H8	120.1°	90.0°
C28	C2	C3	130.1°	90.0°
C2	C28	H8	120.0°	90.0°
C2	C3	N7	130.5°	90.0°
C3	N7	C16	133.9°	90.0°
N7	C16	N6	124.2°	90.0°
N7	C16	C13	131.6°	90.0°
N6	C16	C13	104.1°	90.0°
C16	N6	C15	114.7°	90.0°
C16	N6	GA	125.3°	90.0°
C16	C13	C29	129.7°	90.0°
C16	C13	C14	108.7°	90.0°
C15	N6	GA	119.9°	90.0°
N6	C15	C14	103.6°	90.0°
N6	C15	N8	124.5°	90.0°
N6	GA	N4	93.3°	90.0°
N6	GA	N2	174.5°	90.0°
C29	C13	C14	121.5°	90.0°
C13	C29	C30	119.7°	90.0°
C13	C29	H9	120.1°	90.0°
C13	C14	C32	120.9°	90.0°
C13	C14	C15	108.9°	90.0°
C29	C30	C31	118.8°	90.0°
C30	C29	H9	120.1°	90.0°
C29	C30	H10	120.6°	90.0°
C30	C31	C32	119.7°	90.0°
C31	C30	H10	120.6°	90.0°
C30	C31	H11	120.1°	90.0°
C31	C32	C14	119.3°	90.0°
C32	C31	H11	120.1°	90.0°
C31	C32	H12	120.3°	90.0°
C32	C14	C15	130.2°	90.0°
C14	C32	H12	120.3°	90.0°
C14	C15	N8	131.9°	90.0°
C15	N8	C12	134.9°	90.0°
N8	C12	N4	124.8°	90.0°
N8	C12	C9	130.6°	90.0°
N4	C12	C9	104.5°	90.0°
C12	N4	C11	113.7°	90.0°
C12	N4	GA	122.5°	90.0°
C12	C9	C17	130.3°	90.0°
C12	C9	C10	108.5°	90.0°
C11	N4	GA	123.8°	90.0°
N4	C11	C10	104.3°	90.0°
N4	C11	N5	124.3°	90.0°
N4	GA	N2	92.0°	90.0°
C17	C9	C10	121.2°	90.0°
C9	C17	C18	120.7°	90.0°
C9	C17	H13	119.7°	90.0°
C9	C10	C20	120.2°	90.0°
C9	C10	C11	109.0°	90.0°
C17	C18	C19	118.2°	90.0°
C18	C17	H13	119.7°	90.0°
C17	C18	H14	120.9°	90.0°
C18	C19	C20	118.7°	90.0°
C19	C18	H14	120.9°	90.0°
C18	C19	H15	120.6°	90.0°
C19	C20	C10	121.0°	90.0°
C20	C19	H15	120.6°	90.0°
C19	C20	H16	119.5°	90.0°
C20	C10	C11	130.8°	90.0°
C10	C20	H16	119.5°	90.0°
C10	C11	N5	131.4°	90.0°
C11	N5	C8	135.1°	90.0°
N5	C8	N2	124.9°	90.0°
C8	N2	GA	119.6°	90.0°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
C23	C24	C6	H1	180.0°	90.0°
C24	C23	C22	H2	180.0°	90.0°
C24	C23	C22	C21	0.5°	90.0°
C23	C24	C6	C5	0.4°	90.0°
C23	C24	C6	C7	178.6°	90.0°
C24	C23	C22	H3	179.6°	90.0°
C6	C24	C23	C22	0.2°	90.0°
C24	C6	C5	C21	0.1°	90.0°
C24	C6	C5	C7	178.5°	90.0°
C24	C6	C5	C8	179.2°	90.0°
C24	C6	C7	N3	3.2°	90.0°
C24	C6	C7	N2	179.4°	90.0°
C6	C24	C23	H2	179.8°	90.0°
C23	C22	C21	H3	180.0°	90.0°
C23	C22	C21	C5	1.0°	90.0°
C22	C23	C24	H1	179.8°	90.0°
C23	C22	C21	H4	179.0°	90.0°
C22	C21	C5	H4	180.0°	90.0°
C22	C21	C5	C6	0.8°	90.0°
C22	C21	C5	C8	179.7°	90.0°
C21	C22	C23	H2	179.5°	90.0°
C21	C5	C6	C8	179.1°	90.0°
C21	C5	C6	C7	178.4°	90.0°
C21	C5	C8	N5	1.0°	90.0°
C21	C5	C8	N2	179.0°	90.0°
C5	C21	C22	H3	179.0°	90.0°
C5	C6	C7	N3	178.5°	90.0°
C5	C6	C7	N2	1.0°	90.0°
C6	C5	C8	N5	179.9°	90.0°
C6	C5	C8	N2	0.0°	90.0°
C5	C6	C24	H1	179.6°	90.0°
C6	C5	C21	H4	179.2°	90.0°
C8	C5	C6	C7	0.6°	90.0°
C5	C8	N2	C7	0.7°	90.0°
C5	C8	N5	C11	179.9°	90.0°
C5	C8	N5	N2	179.9°	90.0°
C5	C8	N2	GA	176.9°	90.0°
C8	C5	C21	H4	0.4°	90.0°
C6	C7	N3	N2	177.1°	90.0°
C6	C7	N3	C4	175.5°	90.0°
C6	C7	N2	C8	1.1°	90.0°
C6	C7	N2	GA	177.0°	90.0°
C7	C6	C24	H1	1.4°	90.0°
C7	N3	C4	N1	7.4°	90.0°
C7	N3	C4	C1	172.5°	90.0°
N3	C7	N2	C8	178.9°	90.0°
N3	C7	N2	GA	5.3°	90.0°
N2	C7	N3	C4	7.4°	90.0°
C7	N2	GA	N1	3.2°	90.0°
C7	N2	GA	N6	15.8°	90.0°
C7	N2	GA	N4	179.6°	90.0°
C7	N2	C8	N5	179.2°	90.0°
C7	N2	C8	GA	176.1°	90.0°
N3	C4	N1	C1	179.9°	90.0°
N3	C4	N1	C3	179.7°	90.0°
N3	C4	N1	GA	4.9°	90.0°
N3	C4	C1	C25	0.2°	90.0°
N3	C4	C1	C2	179.4°	90.0°
C4	N1	C3	GA	174.7°	90.0°
N1	C4	C1	C25	179.9°	90.0°
N1	C4	C1	C2	0.5°	90.0°
C4	N1	C3	C2	0.2°	90.0°
C4	N1	C3	N7	178.4°	90.0°
C4	N1	GA	N6	178.5°	90.0°
C4	N1	GA	N4	91.6°	90.0°
C4	N1	GA	N2	2.8°	90.0°
C1	C4	N1	C3	0.2°	90.0°
C1	C4	N1	GA	175.0°	90.0°
C4	C1	C25	C2	179.6°	90.0°
C4	C1	C25	C26	179.6°	90.0°
C4	C1	C2	C28	179.8°	90.0°
C4	C1	C2	C3	0.6°	90.0°
C4	C1	C25	H5	0.5°	90.0°
N1	C3	C2	C1	0.5°	90.0°
N1	C3	C2	C28	179.6°	90.0°
N1	C3	C2	N7	178.0°	90.0°
N1	C3	N7	C16	0.8°	90.0°
C3	N1	GA	N6	4.2°	90.0°
C3	N1	GA	N4	94.2°	90.0°
C3	N1	GA	N2	177.0°	90.0°
GA	N1	C3	C2	174.4°	90.0°
GA	N1	C3	N7	3.7°	90.0°
N1	GA	N6	C16	2.1°	90.0°
N1	GA	N6	C15	174.5°	90.0°
N1	GA	N6	N4	176.5°	90.0°
N1	GA	N6	N2	12.7°	90.0°
N1	GA	N4	C12	89.8°	90.0°
N1	GA	N4	C11	93.9°	90.0°
N1	GA	N4	N2	88.7°	90.0°
N1	GA	N2	C8	178.8°	90.0°
C1	C25	C26	H5	180.0°	90.0°
C1	C25	C26	C27	0.6°	90.0°
C25	C1	C2	C28	0.6°	90.0°
C25	C1	C2	C3	179.7°	90.0°
C1	C25	C26	H6	179.4°	90.0°
C2	C1	C25	C26	0.0°	90.0°
C1	C2	C28	C27	0.5°	90.0°
C1	C2	C28	C3	179.0°	90.0°
C1	C2	C3	N7	178.5°	90.0°
C2	C1	C25	H5	180.0°	90.0°
C1	C2	C28	H8	179.5°	90.0°
C25	C26	C27	H6	180.0°	90.0°
C25	C26	C27	C28	0.6°	90.0°
C25	C26	C27	H7	179.3°	90.0°
C26	C27	C28	H7	180.0°	90.0°
C26	C27	C28	C2	0.1°	90.0°
C27	C26	C25	H5	179.4°	90.0°
C26	C27	C28	H8	179.9°	90.0°
C27	C28	C2	H8	180.0°	90.0°
C27	C28	C2	C3	179.5°	90.0°
C28	C27	C26	H6	179.4°	90.0°
C28	C2	C3	N7	2.4°	90.0°
C2	C28	C27	H7	179.9°	90.0°
C2	C3	N7	C16	178.5°	90.0°
C3	C2	C28	H8	0.6°	90.0°
C3	N7	C16	N6	3.4°	90.0°
C3	N7	C16	C13	174.3°	90.0°
N7	C16	N6	C13	178.2°	90.0°
N7	C16	N6	C15	177.4°	90.0°
N7	C16	N6	GA	0.7°	90.0°
N7	C16	C13	C29	2.4°	90.0°
N7	C16	C13	C14	177.9°	90.0°
C16	N6	C15	GA	176.9°	90.0°
N6	C16	C13	C29	179.6°	90.0°
N6	C16	C13	C14	0.1°	90.0°
C16	N6	C15	C14	1.2°	90.0°
C16	N6	C15	N8	179.0°	90.0°
C16	N6	GA	N4	178.5°	90.0°
C16	N6	GA	N2	14.8°	90.0°
C13	C16	N6	C15	0.8°	90.0°
C13	C16	N6	GA	177.5°	90.0°
C16	C13	C29	C14	179.7°	90.0°
C16	C13	C29	C30	179.4°	90.0°
C16	C13	C14	C32	179.3°	90.0°
C16	C13	C14	C15	0.6°	90.0°
C16	C13	C29	H9	0.6°	90.0°
N6	C15	C14	C13	1.0°	90.0°
N6	C15	C14	C32	178.9°	90.0°
N6	C15	C14	N8	179.8°	90.0°
N6	C15	N8	C12	0.3°	90.0°
C15	N6	GA	N4	2.0°	90.0°
C15	N6	GA	N2	161.8°	90.0°
GA	N6	C15	C14	178.0°	90.0°
GA	N6	C15	N8	2.1°	90.0°
N6	GA	N4	C12	0.0°	90.0°
N6	GA	N4	C11	176.4°	90.0°
N6	GA	N4	N2	178.5°	90.0°
N6	GA	N2	C8	168.5°	90.0°
C13	C29	C30	H9	180.0°	90.0°
C13	C29	C30	C31	0.0°	90.0°
C29	C13	C14	C32	0.4°	90.0°
C29	C13	C14	C15	179.7°	90.0°
C13	C29	C30	H10	180.0°	90.0°
C14	C13	C29	C30	0.2°	90.0°
C13	C14	C32	C31	0.3°	90.0°
C13	C14	C32	C15	179.9°	90.0°
C13	C14	C15	N8	179.2°	90.0°
C14	C13	C29	H9	179.8°	90.0°
C13	C14	C32	H12	179.7°	90.0°
C29	C30	C31	H10	180.0°	90.0°
C29	C30	C31	C32	0.1°	90.0°
C29	C30	C31	H11	179.9°	90.0°
C30	C31	C32	H11	180.0°	90.0°
C30	C31	C32	C14	0.1°	90.0°
C31	C30	C29	H9	180.0°	90.0°
C30	C31	C32	H12	179.9°	90.0°
C31	C32	C14	H12	180.0°	90.0°
C31	C32	C14	C15	179.8°	90.0°
C32	C31	C30	H10	179.9°	90.0°
C32	C14	C15	N8	0.9°	90.0°
C14	C32	C31	H11	179.9°	90.0°
C14	C15	N8	C12	179.5°	90.0°
C15	C14	C32	H12	0.2°	90.0°
C15	N8	C12	N4	2.9°	90.0°
C15	N8	C12	C9	175.1°	90.0°
N8	C12	N4	C9	178.4°	90.0°
N8	C12	N4	C11	178.8°	90.0°
N8	C12	N4	GA	2.1°	90.0°
N8	C12	C9	C17	1.1°	90.0°
N8	C12	C9	C10	178.8°	90.0°
C12	N4	C11	GA	176.7°	90.0°
N4	C12	C9	C17	179.3°	90.0°
N4	C12	C9	C10	0.5°	90.0°
C12	N4	C11	C10	0.0°	90.0°
C12	N4	C11	N5	179.5°	90.0°
C12	N4	GA	N2	178.5°	90.0°
C9	C12	N4	C11	0.3°	90.0°
C9	C12	N4	GA	176.4°	90.0°
C12	C9	C17	C10	179.8°	90.0°
C12	C9	C17	C18	179.9°	90.0°
C12	C9	C10	C20	179.8°	90.0°
C12	C9	C10	C11	0.5°	90.0°
C12	C9	C17	H13	0.1°	90.0°
N4	C11	C10	C9	0.3°	90.0°
N4	C11	C10	C20	179.5°	90.0°
N4	C11	C10	N5	179.5°	90.0°
N4	C11	N5	C8	0.1°	90.0°
C11	N4	GA	N2	5.1°	90.0°
GA	N4	C11	C10	176.6°	90.0°
GA	N4	C11	N5	3.9°	90.0°
N4	GA	N2	C8	4.7°	90.0°
C9	C17	C18	H13	180.0°	90.0°
C9	C17	C18	C19	0.0°	90.0°
C17	C9	C10	C20	0.1°	90.0°
C17	C9	C10	C11	179.4°	90.0°
C9	C17	C18	H14	180.0°	90.0°
C10	C9	C17	C18	0.0°	90.0°
C9	C10	C20	C19	0.2°	90.0°
C9	C10	C20	C11	179.1°	90.0°
C9	C10	C11	N5	179.7°	90.0°
C10	C9	C17	H13	179.9°	90.0°
C9	C10	C20	H16	179.7°	90.0°
C17	C18	C19	H14	180.0°	90.0°
C17	C18	C19	C20	0.2°	90.0°
C17	C18	C19	H15	179.8°	90.0°
C18	C19	C20	H15	180.0°	90.0°
C18	C19	C20	C10	0.3°	90.0°
C19	C18	C17	H13	180.0°	90.0°
C18	C19	C20	H16	179.7°	90.0°
C19	C20	C10	H16	180.0°	90.0°
C19	C20	C10	C11	179.4°	90.0°
C20	C19	C18	H14	179.8°	90.0°
C20	C10	C11	N5	1.1°	90.0°
C10	C20	C19	H15	179.7°	90.0°
C10	C11	N5	C8	179.4°	90.0°
C11	C10	C20	H16	0.6°	90.0°
C11	N5	C8	N2	0.2°	90.0°
N5	C8	N2	GA	3.1°	90.0°
H1	C24	C23	H2	0.2°	90.0°
H2	C23	C22	H3	0.5°	90.0°
H3	C22	C21	H4	0.9°	90.0°
H5	C25	C26	H6	0.6°	90.0°
H6	C26	C27	H7	0.7°	90.0°
H7	C27	C28	H8	0.2°	90.0°
H9	C29	C30	H10	0.0°	90.0°
H10	C30	C31	H11	0.1°	90.0°
H11	C31	C32	H12	0.1°	90.0°
H13	C17	C18	H14	0.0°	90.0°
H14	C18	C19	H15	0.2°	90.0°
H15	C19	C20	H16	0.3°	90.0°

Release date:	2017-12-06
Definition date:	2017-05-17
Last modified:	2020-06-17
Release status:	REL
Processing site:	PDBJ
Derived from:	5XHL