VP8
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| C2 | C1 | doub | 1.38Å | 1.39Å | Aromatic |
| C2 | C3 | sing | 1.38Å | 1.39Å | Aromatic |
| C1 | C | sing | 1.40Å | 1.40Å | Aromatic |
| C3 | C4 | doub | 1.39Å | 1.40Å | Aromatic |
| O2 | B | sing | 1.42Å | 1.35Å | |
| C | B | sing | 1.57Å | 1.51Å | |
| C | C5 | doub | 1.39Å | 1.37Å | Aromatic |
| C4 | C5 | sing | 1.39Å | 1.37Å | Aromatic |
| C4 | O | sing | 1.36Å | 1.38Å | |
| B | O1 | sing | 1.42Å | 1.32Å | |
| C6 | O | sing | 1.43Å | 1.40Å | |
| C6 | C7 | sing | 1.53Å | 1.49Å | |
| C7 | H1 | sing | 1.09Å | 1.10Å | |
| C7 | H2 | sing | 1.09Å | 1.10Å | |
| C7 | H3 | sing | 1.09Å | 1.10Å | |
| C1 | H4 | sing | 1.08Å | 1.08Å | |
| C5 | H5 | sing | 1.08Å | 1.08Å | |
| C6 | H6 | sing | 1.09Å | 1.10Å | |
| C6 | H7 | sing | 1.09Å | 1.10Å | |
| C3 | H8 | sing | 1.08Å | 1.08Å | |
| C2 | H9 | sing | 1.08Å | 1.08Å | |
| O2 | H10 | sing | 0.97Å | 0.95Å | |
| O1 | H11 | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| C1 | C2 | C3 | 120.4° | 120.2° |
| C2 | C1 | C | 119.9° | 120.0° |
| C2 | C1 | H4 | 120.0° | 120.0° |
| C1 | C2 | H9 | 119.8° | 119.9° |
| C2 | C3 | C4 | 119.0° | 120.2° |
| C2 | C3 | H8 | 120.5° | 119.9° |
| C3 | C2 | H9 | 119.8° | 119.9° |
| C1 | C | B | 123.0° | 120.1° |
| C1 | C | C5 | 118.7° | 119.8° |
| C | C1 | H4 | 120.0° | 120.0° |
| C3 | C4 | C5 | 119.8° | 120.0° |
| C3 | C4 | O | 121.1° | 120.0° |
| C4 | C3 | H8 | 120.5° | 119.9° |
| O2 | B | C | 126.7° | 120.0° |
| O2 | B | O1 | 113.3° | 120.0° |
| B | O2 | H10 | 109.5° | 114.0° |
| B | C | C5 | 117.9° | 120.1° |
| C | B | O1 | 119.8° | 120.0° |
| C | C5 | C4 | 122.1° | 119.8° |
| C | C5 | H5 | 119.0° | 120.1° |
| C5 | C4 | O | 119.1° | 120.0° |
| C4 | C5 | H5 | 118.9° | 120.0° |
| C4 | O | C6 | 119.5° | 117.0° |
| B | O1 | H11 | 109.5° | 114.0° |
| O | C6 | C7 | 104.6° | 109.4° |
| O | C6 | H6 | 110.7° | 109.5° |
| O | C6 | H7 | 110.7° | 109.5° |
| C6 | C7 | H1 | 109.5° | 109.4° |
| C6 | C7 | H2 | 109.5° | 109.4° |
| C6 | C7 | H3 | 109.4° | 109.5° |
| C7 | C6 | H6 | 110.7° | 109.5° |
| C7 | C6 | H7 | 110.7° | 109.5° |
| H1 | C7 | H2 | 109.5° | 109.5° |
| H1 | C7 | H3 | 109.4° | 109.5° |
| H2 | C7 | H3 | 109.5° | 109.5° |
| H6 | C6 | H7 | 109.4° | 109.5° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| C1 | C2 | C3 | H9 | 180.0° | 179.9° |
| C2 | C1 | C | H4 | 180.0° | 179.7° |
| C1 | C2 | C3 | C4 | 0.9° | 0.5° |
| C2 | C1 | C | B | 171.8° | 179.7° |
| C2 | C1 | C | C5 | 1.6° | 0.2° |
| C1 | C2 | C3 | H8 | 179.1° | 179.7° |
| C3 | C2 | C1 | C | 0.4° | 0.0° |
| C2 | C3 | C4 | H8 | 180.0° | 179.2° |
| C2 | C3 | C4 | C5 | 0.7° | 0.8° |
| C2 | C3 | C4 | O | 175.6° | 179.8° |
| C3 | C2 | C1 | H4 | 179.6° | 179.7° |
| C1 | C | B | O2 | 10.2° | 0.0° |
| C1 | C | B | C5 | 173.5° | 179.9° |
| C1 | C | C5 | C4 | 3.3° | 0.1° |
| C1 | C | B | O1 | 174.1° | 180.0° |
| C1 | C | C5 | H5 | 176.7° | 180.0° |
| C | C1 | C2 | H9 | 179.6° | 180.0° |
| C3 | C4 | C5 | C | 2.9° | 0.6° |
| C3 | C4 | C5 | O | 176.4° | 179.4° |
| C3 | C4 | O | C6 | 8.5° | 0.6° |
| C3 | C4 | C5 | H5 | 177.1° | 179.5° |
| C4 | C3 | C2 | H9 | 179.1° | 179.4° |
| O2 | B | C | O1 | 175.8° | 180.0° |
| O2 | B | C | C5 | 163.3° | 180.0° |
| O2 | B | O1 | H11 | 180.0° | 0.0° |
| B | C | C5 | C4 | 170.5° | 180.0° |
| B | C | C1 | H4 | 8.1° | 0.0° |
| B | C | C5 | H5 | 9.5° | 0.1° |
| C | B | O2 | H10 | 180.0° | 0.1° |
| C | B | O1 | H11 | 3.7° | 180.0° |
| C | C5 | C4 | H5 | 180.0° | 179.9° |
| C | C5 | C4 | O | 173.5° | 180.0° |
| C5 | C | B | O1 | 12.5° | 0.1° |
| C5 | C | C1 | H4 | 178.4° | 179.9° |
| C5 | C4 | O | C6 | 175.2° | 180.0° |
| C5 | C4 | C3 | H8 | 179.3° | 180.0° |
| C4 | O | C6 | C7 | 174.5° | 180.0° |
| O | C4 | C5 | H5 | 6.5° | 0.1° |
| C4 | O | C6 | H6 | 55.3° | 60.0° |
| C4 | O | C6 | H7 | 66.2° | 59.9° |
| O | C4 | C3 | H8 | 4.4° | 0.6° |
| O1 | B | O2 | H10 | 4.0° | 180.0° |
| O | C6 | C7 | H6 | 119.2° | 120.0° |
| O | C6 | C7 | H7 | 119.3° | 120.0° |
| O | C6 | C7 | H1 | 180.0° | 60.1° |
| O | C6 | C7 | H2 | 60.0° | 180.0° |
| O | C6 | C7 | H3 | 60.0° | 60.0° |
| O | C6 | H6 | H7 | 122.3° | 120.0° |
| C6 | C7 | H1 | H2 | 120.0° | 119.9° |
| C6 | C7 | H1 | H3 | 120.0° | 120.0° |
| C6 | C7 | H2 | H3 | 120.0° | 120.0° |
| C7 | C6 | H6 | H7 | 122.2° | 120.0° |
| H1 | C7 | H2 | H3 | 120.0° | 120.1° |
| H1 | C7 | C6 | H6 | 60.8° | 180.0° |
| H1 | C7 | C6 | H7 | 60.8° | 60.0° |
| H2 | C7 | C6 | H6 | 179.2° | 60.0° |
| H2 | C7 | C6 | H7 | 59.3° | 60.0° |
| H3 | C7 | C6 | H6 | 59.2° | 60.0° |
| H3 | C7 | C6 | H7 | 179.3° | 180.0° |
| H4 | C1 | C2 | H9 | 0.4° | 0.4° |
| H8 | C3 | C2 | H9 | 0.9° | 0.2° |
