VP7
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| C13 | C12 | sing | 1.53Å | 1.52Å | |
| O1 | C12 | sing | 1.43Å | 1.44Å | |
| C12 | C14 | sing | 1.53Å | 1.52Å | |
| C12 | C11 | sing | 1.47Å | 1.47Å | |
| C11 | C10 | trip | 1.17Å | 1.19Å | |
| C10 | C9 | sing | 1.43Å | 1.43Å | |
| C9 | C15 | doub | 1.40Å | 1.40Å | Aromatic |
| C9 | C8 | sing | 1.40Å | 1.40Å | Aromatic |
| C15 | C16 | sing | 1.37Å | 1.37Å | Aromatic |
| C8 | C7 | doub | 1.39Å | 1.40Å | Aromatic |
| N2 | C4 | sing | 1.38Å | 1.34Å | |
| C16 | C17 | doub | 1.39Å | 1.39Å | Aromatic |
| C7 | C17 | sing | 1.42Å | 1.41Å | Aromatic |
| C7 | C6 | sing | 1.45Å | 1.45Å | Aromatic |
| N3 | C4 | doub | 1.33Å | 1.36Å | Aromatic |
| N3 | C5 | sing | 1.32Å | 1.35Å | Aromatic |
| C4 | N1 | sing | 1.33Å | 1.35Å | Aromatic |
| C17 | N4 | sing | 1.37Å | 1.37Å | Aromatic |
| C6 | C5 | sing | 1.48Å | 1.47Å | |
| C6 | C18 | doub | 1.36Å | 1.38Å | Aromatic |
| C5 | C2 | doub | 1.40Å | 1.41Å | Aromatic |
| N1 | C3 | doub | 1.33Å | 1.33Å | Aromatic |
| N4 | C18 | sing | 1.36Å | 1.37Å | Aromatic |
| C18 | C19 | sing | 1.50Å | 1.49Å | |
| C3 | C2 | sing | 1.38Å | 1.38Å | Aromatic |
| C2 | C1 | sing | 1.50Å | 1.51Å | |
| C20 | C19 | sing | 1.53Å | 1.51Å | |
| C20 | C1 | sing | 1.53Å | 1.52Å | |
| C8 | H1 | sing | 1.08Å | 1.08Å | |
| C13 | H2 | sing | 1.09Å | 1.10Å | |
| C13 | H3 | sing | 1.09Å | 1.10Å | |
| C13 | H4 | sing | 1.09Å | 1.10Å | |
| C15 | H5 | sing | 1.08Å | 1.08Å | |
| C20 | H6 | sing | 1.09Å | 1.10Å | |
| C20 | H7 | sing | 1.09Å | 1.10Å | |
| C1 | H8 | sing | 1.09Å | 1.10Å | |
| C1 | H9 | sing | 1.09Å | 1.10Å | |
| C14 | H10 | sing | 1.09Å | 1.10Å | |
| C14 | H11 | sing | 1.09Å | 1.10Å | |
| C14 | H12 | sing | 1.09Å | 1.10Å | |
| C16 | H13 | sing | 1.08Å | 1.08Å | |
| C19 | H14 | sing | 1.09Å | 1.10Å | |
| C19 | H15 | sing | 1.09Å | 1.10Å | |
| C3 | H16 | sing | 1.08Å | 1.08Å | |
| N2 | H17 | sing | 0.97Å | 1.00Å | |
| N2 | H18 | sing | 0.97Å | 1.00Å | |
| N4 | H19 | sing | 0.97Å | 1.00Å | |
| O1 | H20 | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| C13 | C12 | O1 | 108.0° | 109.5° |
| C13 | C12 | C14 | 110.9° | 109.5° |
| C13 | C12 | C11 | 110.4° | 109.5° |
| C12 | C13 | H2 | 109.5° | 109.4° |
| C12 | C13 | H3 | 109.5° | 109.5° |
| C12 | C13 | H4 | 109.5° | 109.5° |
| O1 | C12 | C14 | 108.1° | 109.5° |
| O1 | C12 | C11 | 108.5° | 109.4° |
| C12 | O1 | H20 | 109.5° | 114.0° |
| C14 | C12 | C11 | 110.8° | 109.5° |
| C12 | C14 | H10 | 109.5° | 109.5° |
| C12 | C14 | H11 | 109.4° | 109.5° |
| C12 | C14 | H12 | 109.5° | 109.4° |
| C12 | C11 | C10 | 177.5° | 180.0° |
| C11 | C10 | C9 | 177.8° | 180.0° |
| C10 | C9 | C15 | 117.2° | 119.2° |
| C10 | C9 | C8 | 121.9° | 119.2° |
| C15 | C9 | C8 | 120.9° | 121.6° |
| C9 | C15 | C16 | 121.5° | 122.2° |
| C9 | C15 | H5 | 119.3° | 118.9° |
| C9 | C8 | C7 | 118.7° | 116.7° |
| C9 | C8 | H1 | 120.7° | 121.7° |
| C15 | C16 | C17 | 117.4° | 117.5° |
| C16 | C15 | H5 | 119.3° | 118.9° |
| C15 | C16 | H13 | 121.3° | 121.2° |
| C8 | C7 | C17 | 118.2° | 121.3° |
| C8 | C7 | C6 | 135.5° | 133.2° |
| C7 | C8 | H1 | 120.6° | 121.7° |
| N2 | C4 | N3 | 118.9° | 119.0° |
| N2 | C4 | N1 | 117.3° | 119.1° |
| C4 | N2 | H17 | 109.5° | 120.0° |
| C4 | N2 | H18 | 109.5° | 119.9° |
| C16 | C17 | C7 | 123.1° | 120.8° |
| C16 | C17 | N4 | 129.1° | 131.6° |
| C17 | C16 | H13 | 121.3° | 121.3° |
| C17 | C7 | C6 | 106.2° | 105.5° |
| C7 | C17 | N4 | 107.8° | 107.6° |
| C7 | C6 | C5 | 121.6° | 131.6° |
| C7 | C6 | C18 | 106.7° | 107.6° |
| C4 | N3 | C5 | 119.0° | 119.7° |
| N3 | C4 | N1 | 123.8° | 121.8° |
| N3 | C5 | C6 | 116.8° | 123.0° |
| N3 | C5 | C2 | 118.9° | 119.8° |
| C4 | N1 | C3 | 117.3° | 121.4° |
| C17 | N4 | C18 | 110.5° | 110.1° |
| C17 | N4 | H19 | 124.7° | 124.9° |
| C5 | C6 | C18 | 131.7° | 120.9° |
| C6 | C5 | C2 | 124.2° | 117.0° |
| C6 | C18 | N4 | 108.8° | 109.2° |
| C6 | C18 | C19 | 131.6° | 123.1° |
| C5 | C2 | C3 | 118.5° | 118.4° |
| C5 | C2 | C1 | 123.0° | 119.0° |
| N1 | C3 | C2 | 122.6° | 118.7° |
| N1 | C3 | H16 | 118.7° | 120.7° |
| N4 | C18 | C19 | 119.6° | 127.6° |
| C18 | N4 | H19 | 124.7° | 124.9° |
| C18 | C19 | C20 | 114.8° | 111.3° |
| C18 | C19 | H14 | 108.1° | 109.1° |
| C18 | C19 | H15 | 108.1° | 109.1° |
| C3 | C2 | C1 | 118.5° | 122.6° |
| C2 | C3 | H16 | 118.7° | 120.6° |
| C2 | C1 | C20 | 117.3° | 113.5° |
| C2 | C1 | H8 | 107.5° | 108.7° |
| C2 | C1 | H9 | 107.5° | 108.6° |
| C19 | C20 | C1 | 108.7° | 109.5° |
| C19 | C20 | H6 | 109.7° | 109.4° |
| C19 | C20 | H7 | 109.7° | 109.5° |
| C20 | C19 | H14 | 108.1° | 109.1° |
| C20 | C19 | H15 | 108.1° | 109.1° |
| C1 | C20 | H6 | 109.7° | 109.5° |
| C1 | C20 | H7 | 109.7° | 109.5° |
| C20 | C1 | H8 | 107.5° | 108.7° |
| C20 | C1 | H9 | 107.5° | 108.7° |
| H2 | C13 | H3 | 109.4° | 109.5° |
| H2 | C13 | H4 | 109.5° | 109.5° |
| H3 | C13 | H4 | 109.5° | 109.5° |
| H6 | C20 | H7 | 109.4° | 109.5° |
| H8 | C1 | H9 | 109.4° | 108.6° |
| H10 | C14 | H11 | 109.5° | 109.5° |
| H10 | C14 | H12 | 109.4° | 109.5° |
| H11 | C14 | H12 | 109.5° | 109.5° |
| H14 | C19 | H15 | 109.5° | 109.0° |
| H17 | N2 | H18 | 109.4° | 120.0° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| C13 | C12 | O1 | C14 | 120.1° | 120.0° |
| C13 | C12 | O1 | C11 | 119.7° | 120.0° |
| C13 | C12 | C14 | C11 | 123.0° | 120.0° |
| C13 | C12 | C11 | C10 | 169.8° | 116.3° |
| C12 | C13 | H2 | H3 | 120.0° | 120.0° |
| C12 | C13 | H2 | H4 | 120.1° | 120.0° |
| C12 | C13 | H3 | H4 | 120.0° | 120.0° |
| C13 | C12 | C14 | H10 | 180.0° | 60.0° |
| C13 | C12 | C14 | H11 | 60.0° | 180.0° |
| C13 | C12 | C14 | H12 | 60.0° | 60.0° |
| C13 | C12 | O1 | H20 | 180.0° | 60.0° |
| O1 | C12 | C14 | C11 | 118.8° | 120.0° |
| O1 | C12 | C11 | C10 | 72.0° | 123.8° |
| O1 | C12 | C13 | H2 | 180.0° | 180.0° |
| O1 | C12 | C13 | H3 | 60.0° | 60.0° |
| O1 | C12 | C13 | H4 | 60.0° | 60.0° |
| O1 | C12 | C14 | H10 | 61.8° | 60.0° |
| O1 | C12 | C14 | H11 | 178.2° | 60.0° |
| O1 | C12 | C14 | H12 | 58.2° | 180.0° |
| C14 | C12 | C11 | C10 | 46.4° | 3.8° |
| C14 | C12 | C13 | H2 | 61.7° | 60.0° |
| C14 | C12 | C13 | H3 | 178.3° | 180.0° |
| C14 | C12 | C13 | H4 | 58.3° | 60.0° |
| C12 | C14 | H10 | H11 | 120.0° | 120.0° |
| C12 | C14 | H10 | H12 | 120.0° | 119.9° |
| C12 | C14 | H11 | H12 | 120.0° | 119.9° |
| C14 | C12 | O1 | H20 | 59.9° | 60.0° |
| C12 | C11 | C10 | C9 | 178.4° | 58.5° |
| C11 | C12 | C13 | H2 | 61.5° | 60.0° |
| C11 | C12 | C13 | H3 | 58.5° | 59.9° |
| C11 | C12 | C13 | H4 | 178.5° | 180.0° |
| C11 | C12 | C14 | H10 | 57.0° | 180.0° |
| C11 | C12 | C14 | H11 | 63.0° | 60.0° |
| C11 | C12 | C14 | H12 | 177.0° | 60.0° |
| C11 | C12 | O1 | H20 | 60.3° | 180.0° |
| C11 | C10 | C9 | C15 | 95.3° | 122.3° |
| C11 | C10 | C9 | C8 | 84.9° | 57.8° |
| C10 | C9 | C15 | C8 | 179.8° | 179.9° |
| C10 | C9 | C15 | C16 | 177.8° | 180.0° |
| C10 | C9 | C8 | C7 | 177.2° | 180.0° |
| C10 | C9 | C8 | H1 | 2.8° | 0.2° |
| C10 | C9 | C15 | H5 | 2.2° | 0.0° |
| C9 | C15 | C16 | H5 | 180.0° | 179.9° |
| C15 | C9 | C8 | C7 | 3.0° | 0.1° |
| C9 | C15 | C16 | C17 | 2.4° | 0.1° |
| C15 | C9 | C8 | H1 | 177.0° | 179.9° |
| C9 | C15 | C16 | H13 | 177.6° | 179.9° |
| C8 | C9 | C15 | C16 | 2.4° | 0.1° |
| C9 | C8 | C7 | H1 | 180.0° | 179.8° |
| C9 | C8 | C7 | C17 | 3.5° | 0.0° |
| C9 | C8 | C7 | C6 | 179.0° | 179.7° |
| C8 | C9 | C15 | H5 | 177.6° | 179.9° |
| C15 | C16 | C17 | H13 | 180.0° | 180.0° |
| C15 | C16 | C17 | C7 | 3.0° | 0.0° |
| C15 | C16 | C17 | N4 | 179.6° | 179.9° |
| C8 | C7 | C17 | C16 | 3.6° | 0.1° |
| C8 | C7 | C17 | C6 | 176.7° | 179.8° |
| C8 | C7 | C17 | N4 | 178.5° | 180.0° |
| C8 | C7 | C6 | C5 | 2.6° | 0.4° |
| C8 | C7 | C6 | C18 | 178.3° | 179.8° |
| N2 | C4 | N3 | N1 | 178.9° | 179.9° |
| N2 | C4 | N3 | C5 | 179.0° | 180.0° |
| N2 | C4 | N1 | C3 | 178.4° | 178.7° |
| C4 | N2 | H17 | H18 | 120.0° | 180.0° |
| C16 | C17 | C7 | N4 | 177.9° | 180.0° |
| C16 | C17 | C7 | C6 | 179.7° | 179.7° |
| C16 | C17 | N4 | C18 | 178.1° | 180.0° |
| C17 | C16 | C15 | H5 | 177.7° | 180.0° |
| C16 | C17 | N4 | H19 | 1.9° | 0.1° |
| C17 | C7 | C6 | C5 | 178.5° | 179.3° |
| C17 | C7 | C6 | C18 | 2.5° | 0.4° |
| C7 | C17 | N4 | C18 | 0.4° | 0.0° |
| C17 | C7 | C8 | H1 | 176.5° | 179.8° |
| C7 | C17 | C16 | H13 | 177.0° | 180.0° |
| C7 | C17 | N4 | H19 | 179.6° | 180.0° |
| C7 | C6 | C5 | N3 | 7.7° | 49.4° |
| C6 | C7 | C17 | N4 | 1.7° | 0.2° |
| C7 | C6 | C5 | C18 | 178.8° | 179.7° |
| C7 | C6 | C5 | C2 | 170.9° | 135.1° |
| C7 | C6 | C18 | N4 | 2.3° | 0.5° |
| C7 | C6 | C18 | C19 | 179.9° | 179.4° |
| C6 | C7 | C8 | H1 | 1.0° | 0.5° |
| C4 | N3 | C5 | C6 | 179.4° | 172.8° |
| C4 | N3 | C5 | C2 | 0.7° | 2.5° |
| N3 | C4 | N1 | C3 | 0.5° | 1.4° |
| N3 | C4 | N2 | H17 | 0.0° | 0.0° |
| N3 | C4 | N2 | H18 | 120.0° | 180.0° |
| C5 | N3 | C4 | N1 | 0.1° | 0.0° |
| N3 | C5 | C6 | C2 | 178.6° | 175.5° |
| N3 | C5 | C6 | C18 | 171.1° | 130.9° |
| N3 | C5 | C2 | C3 | 0.6° | 3.7° |
| N3 | C5 | C2 | C1 | 177.8° | 174.8° |
| C4 | N1 | C3 | C2 | 0.6° | 0.1° |
| C4 | N1 | C3 | H16 | 179.4° | 179.9° |
| N1 | C4 | N2 | H17 | 179.0° | 180.0° |
| N1 | C4 | N2 | H18 | 58.9° | 0.1° |
| C17 | N4 | C18 | C6 | 1.2° | 0.3° |
| C17 | N4 | C18 | H19 | 180.0° | 180.0° |
| C17 | N4 | C18 | C19 | 179.2° | 179.6° |
| N4 | C17 | C16 | H13 | 0.5° | 0.1° |
| C5 | C6 | C18 | N4 | 178.8° | 179.3° |
| C5 | C6 | C18 | C19 | 1.2° | 0.8° |
| C6 | C5 | C2 | C3 | 179.2° | 171.9° |
| C6 | C5 | C2 | C1 | 0.8° | 9.6° |
| C18 | C6 | C5 | C2 | 10.3° | 44.6° |
| C6 | C18 | N4 | C19 | 178.0° | 179.9° |
| C6 | C18 | C19 | C20 | 22.5° | 73.6° |
| C6 | C18 | C19 | H14 | 98.3° | 165.9° |
| C6 | C18 | C19 | H15 | 143.2° | 46.9° |
| C6 | C18 | N4 | H19 | 178.8° | 179.7° |
| C5 | C2 | C3 | N1 | 0.0° | 2.4° |
| C5 | C2 | C3 | C1 | 178.5° | 178.5° |
| C5 | C2 | C1 | C20 | 50.2° | 81.5° |
| C5 | C2 | C1 | H8 | 171.3° | 157.4° |
| C5 | C2 | C1 | H9 | 71.0° | 39.5° |
| C5 | C2 | C3 | H16 | 180.0° | 177.6° |
| N1 | C3 | C2 | H16 | 180.0° | 180.0° |
| N1 | C3 | C2 | C1 | 178.5° | 176.1° |
| N4 | C18 | C19 | C20 | 160.1° | 106.5° |
| N4 | C18 | C19 | H14 | 79.1° | 14.0° |
| N4 | C18 | C19 | H15 | 39.4° | 133.0° |
| C18 | C19 | C20 | H14 | 120.8° | 120.5° |
| C18 | C19 | C20 | H15 | 120.8° | 120.5° |
| C18 | C19 | C20 | C1 | 65.0° | 42.5° |
| C18 | C19 | C20 | H6 | 175.1° | 77.5° |
| C18 | C19 | C20 | H7 | 54.9° | 162.5° |
| C18 | C19 | H14 | H15 | 117.6° | 119.1° |
| C19 | C18 | N4 | H19 | 0.8° | 0.4° |
| C3 | C2 | C1 | C20 | 131.4° | 100.0° |
| C3 | C2 | C1 | H8 | 10.3° | 21.0° |
| C3 | C2 | C1 | H9 | 107.4° | 139.0° |
| C2 | C1 | C20 | C19 | 87.5° | 44.0° |
| C2 | C1 | C20 | H8 | 121.1° | 121.1° |
| C2 | C1 | C20 | H9 | 121.1° | 120.9° |
| C2 | C1 | C20 | H6 | 152.6° | 164.0° |
| C2 | C1 | C20 | H7 | 32.4° | 76.0° |
| C2 | C1 | H8 | H9 | 116.4° | 118.0° |
| C1 | C2 | C3 | H16 | 1.5° | 3.9° |
| C19 | C20 | C1 | H6 | 119.9° | 120.0° |
| C19 | C20 | C1 | H7 | 119.9° | 120.0° |
| C19 | C20 | H6 | H7 | 120.4° | 120.0° |
| C19 | C20 | C1 | H8 | 151.4° | 165.1° |
| C19 | C20 | C1 | H9 | 33.6° | 76.9° |
| C20 | C19 | H14 | H15 | 117.6° | 119.1° |
| C1 | C20 | H6 | H7 | 120.3° | 120.0° |
| C20 | C1 | H8 | H9 | 116.5° | 118.0° |
| C1 | C20 | C19 | H14 | 55.8° | 163.0° |
| C1 | C20 | C19 | H15 | 174.2° | 78.0° |
| H2 | C13 | H3 | H4 | 120.0° | 120.0° |
| H5 | C15 | C16 | H13 | 2.3° | 0.0° |
| H6 | C20 | C1 | H8 | 31.5° | 75.0° |
| H6 | C20 | C1 | H9 | 86.3° | 43.0° |
| H6 | C20 | C19 | H14 | 64.1° | 43.0° |
| H6 | C20 | C19 | H15 | 54.3° | 162.0° |
| H7 | C20 | C1 | H8 | 88.7° | 45.1° |
| H7 | C20 | C1 | H9 | 153.5° | 163.0° |
| H7 | C20 | C19 | H14 | 175.7° | 77.0° |
| H7 | C20 | C19 | H15 | 65.9° | 42.0° |
| H10 | C14 | H11 | H12 | 120.0° | 120.0° |
