Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

VOP

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C11C10doub1.35Å1.36ÅAromatic
C11C12sing1.40Å1.39ÅAromatic
C10N9sing1.35Å1.36ÅAromatic
C12N13doub1.31Å1.33ÅAromatic
N9N13sing1.40Å1.37ÅAromatic
N9C8sing1.40Å1.43Å
C7C8doub1.38Å1.39ÅAromatic
C7C6sing1.40Å1.40ÅAromatic
C8C3sing1.40Å1.41ÅAromatic
C6C14sing1.46Å1.42ÅAromatic
C6C5doub1.41Å1.41ÅAromatic
C14N15doub1.30Å1.31ÅAromatic
C1C2sing1.53Å1.52Å
O19C18doub1.21Å1.21Å
C3C2sing1.51Å1.52Å
C3C4doub1.37Å1.40ÅAromatic
C2O21sing1.43Å1.43Å
N15N16sing1.40Å1.37ÅAromatic
C5C4sing1.39Å1.40ÅAromatic
C5N16sing1.37Å1.37ÅAromatic
N16C17sing1.47Å1.45Å
C18O20sing1.34Å1.31Å
C18C17sing1.51Å1.51Å
O21C22sing1.36Å1.38Å
C23C22doub1.37Å1.37ÅAromatic
C23C24sing1.41Å1.41ÅAromatic
C25C24doub1.40Å1.42ÅAromatic
C25C26sing1.36Å1.35ÅAromatic
C22C31sing1.41Å1.41ÅAromatic
C24C29sing1.42Å1.42ÅAromatic
F33C26sing1.35Å1.36Å
C26C27doub1.39Å1.39ÅAromatic
C31N32sing1.39Å1.34Å
C31N30doub1.32Å1.33ÅAromatic
C29N30sing1.34Å1.37ÅAromatic
C29C28doub1.40Å1.42ÅAromatic
C27C28sing1.36Å1.37ÅAromatic
C4H1sing1.08Å1.08Å
C7H2sing1.08Å1.08Å
C1H3sing1.09Å1.10Å
C1H4sing1.09Å1.10Å
C1H5sing1.09Å1.10Å
C2H6sing1.09Å1.10Å
C10H7sing1.08Å1.08Å
C11H8sing1.08Å1.08Å
C12H9sing1.08Å1.08Å
C14H10sing1.08Å1.08Å
C17H11sing1.09Å1.10Å
C17H12sing1.09Å1.10Å
O20H13sing0.97Å0.95Å
C23H14sing1.08Å1.08Å
C25H15sing1.08Å1.08Å
C27H16sing1.08Å1.08Å
C28H17sing1.08Å1.08Å
N32H18sing0.97Å1.00Å
N32H19sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C10C11C12105.1°107.9°
C11C10N9106.9°107.7°
C11C10H7126.6°126.1°
C10C11H8127.5°126.0°
C11C12N13112.2°108.3°
C12C11H8127.4°126.1°
C11C12H9123.9°125.8°
C10N9N13111.6°107.9°
C10N9C8130.2°126.0°
N9C10H7126.5°126.2°
C12N13N9104.1°108.2°
N13C12H9123.9°125.9°
N13N9C8118.0°126.1°
N9C8C7117.0°119.9°
N9C8C3120.8°119.8°
C8C7C6119.4°119.5°
C7C8C3122.0°120.3°
C8C7H2120.3°120.2°
C7C6C14136.4°133.9°
C7C6C5119.1°119.7°
C6C7H2120.3°120.3°
C8C3C2124.7°119.6°
C8C3C4118.4°120.8°
C14C6C5104.5°106.4°
C6C14N15111.7°107.8°
C6C14H10124.1°126.1°
C6C5C4121.5°119.7°
C6C5N16106.3°106.7°
C14N15N16106.2°110.1°
N15C14H10124.2°126.1°
C1C2C3112.2°109.4°
C1C2O21106.1°109.5°
C2C1H3109.5°109.5°
C2C1H4109.5°109.5°
C2C1H5109.5°109.6°
C1C2H6109.2°109.5°
O19C18O20122.5°120.0°
O19C18C17122.4°120.0°
C2C3C4116.9°119.6°
C3C2O21109.8°109.4°
C3C2H6109.1°109.5°
C3C4C5119.6°120.1°
C3C4H1120.2°119.9°
C2O21C22119.3°117.0°
O21C2H6110.4°109.5°
N15N16C5111.4°109.1°
N15N16C17120.0°125.4°
C4C5N16132.2°133.7°
C5C4H1120.2°120.0°
C5N16C17128.3°125.5°
N16C17C18111.8°109.5°
N16C17H11108.9°109.5°
N16C17H12108.9°109.5°
O20C18C17115.1°120.0°
C18O20H13109.5°117.0°
C18C17H11108.9°109.5°
C18C17H12108.9°109.5°
O21C22C23125.5°120.1°
O21C22C31115.5°120.1°
C22C23C24119.4°118.3°
C23C22C31119.0°119.8°
C22C23H14120.3°120.9°
C23C24C25123.1°121.2°
C23C24C29118.0°119.2°
C24C23H14120.3°120.8°
C24C25C26119.2°119.6°
C25C24C29118.8°119.7°
C24C25H15120.4°120.2°
C25C26F33118.7°119.6°
C25C26C27123.1°120.9°
C26C25H15120.4°120.3°
C22C31N32118.1°119.3°
C22C31N30123.9°121.5°
C24C29N30122.0°120.0°
C24C29C28118.9°119.1°
F33C26C27118.1°119.6°
C26C27C28119.1°120.9°
C26C27H16120.4°119.6°
N32C31N30117.9°119.2°
C31N32H18109.5°120.0°
C31N32H19109.5°120.0°
C31N30C29117.6°121.3°
N30C29C28119.0°120.9°
C29C28C27120.7°119.9°
C29C28H17119.6°120.1°
C28C27H16120.5°119.5°
C27C28H17119.7°120.1°
H3C1H4109.4°109.4°
H3C1H5109.5°109.5°
H4C1H5109.5°109.4°
H11C17H12109.4°109.4°
H18N32H19109.5°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C10C11C12H8180.0°180.0°
C11C10N9H7180.0°180.0°
C10C11C12N131.3°0.0°
C11C10N9N133.1°0.0°
C11C10N9C8177.5°179.7°
C10C11C12H9178.7°180.0°
C12C11C10N92.6°0.0°
C11C12N13H9180.0°180.0°
C11C12N13N90.5°0.0°
C12C11C10H7177.4°180.0°
C10N9N13C122.2°0.0°
C10N9N13C8175.1°179.7°
C10N9C8C7124.0°48.8°
C10N9C8C350.6°131.5°
N9C10C11H8177.4°180.0°
C12N13N9C8177.4°179.7°
N13C12C11H8178.6°180.0°
N13N9C8C762.0°130.9°
N13N9C8C3123.5°48.8°
N13N9C10H7176.9°180.0°
N9N13C12H9179.5°180.0°
N9C8C7C3174.5°179.7°
N9C8C7C6177.3°180.0°
N9C8C3C26.4°0.2°
N9C8C3C4177.3°179.7°
N9C8C7H22.8°0.3°
C8N9C10H72.5°0.3°
C8C7C6H2180.0°179.7°
C8C7C6C14178.0°179.9°
C8C7C6C50.4°0.3°
C7C8C3C2179.4°179.9°
C7C8C3C43.1°0.1°
C6C7C8C32.8°0.3°
C7C6C14C5178.5°179.7°
C7C6C14N15178.0°179.9°
C7C6C5C41.8°0.0°
C7C6C5N16178.8°179.9°
C7C6C14H102.0°0.0°
C8C3C2C1113.8°84.6°
C8C3C2C4176.3°179.9°
C8C3C2O21128.5°155.5°
C8C3C4C50.9°0.3°
C8C3C4H1179.1°180.0°
C3C8C7H2177.2°179.9°
C8C3C2H67.4°35.5°
C6C14N15H10180.0°179.9°
C6C14N15N160.9°0.5°
C14C6C5C4179.4°179.7°
C14C6C5N160.0°0.2°
C14C6C7H22.0°0.4°
C5C6C14N150.5°0.4°
C6C5C4C31.5°0.3°
C6C5N16N150.6°0.1°
C6C5C4N16179.2°179.9°
C6C5N16C17173.0°179.9°
C6C5C4H1178.5°179.9°
C5C6C7H2179.7°180.0°
C5C6C14H10179.5°179.6°
C14N15N16C50.9°0.3°
C14N15N16C17173.3°179.8°
C1C2C3O21117.7°119.9°
C1C2C3H6121.1°120.0°
C1C2C3C469.9°95.6°
C1C2O21H6118.1°120.1°
C1C2O21C22165.2°84.8°
C2C1H3H4120.0°120.0°
C2C1H3H5120.0°120.1°
C2C1H4H5120.0°120.1°
O19C18C17N161.6°0.0°
O19C18O20C17178.7°180.0°
O19C18C17H11122.0°120.0°
O19C18C17H12118.8°120.0°
O19C18O20H130.0°0.0°
C3C2O21H6120.4°120.0°
C2C3C4C5177.5°179.8°
C3C2O21C2273.3°155.3°
C2C3C4H12.5°0.1°
C3C2C1H3180.0°60.0°
C3C2C1H460.0°180.0°
C3C2C1H560.0°60.0°
C4C3C2O2147.8°24.4°
C3C4C5H1180.0°179.6°
C3C4C5N16179.3°179.8°
C4C3C2H6168.9°144.4°
C2O21C22C236.2°4.8°
C2O21C22C31174.3°175.1°
O21C2C1H360.0°180.0°
O21C2C1H459.9°60.1°
O21C2C1H5180.0°59.9°
N15N16C5C4179.8°180.0°
N15N16C5C17173.6°179.9°
N15N16C17C1882.2°90.1°
N16N15C14H10179.2°179.6°
N15N16C17H11157.5°149.9°
N15N16C17H1238.2°29.9°
C4C5N16C176.2°0.1°
C5N16C17C1891.0°90.0°
N16C5C4H10.6°0.1°
C5N16C17H1129.4°29.9°
C5N16C17H12148.7°149.9°
N16C17C18O20177.1°180.0°
N16C17C18H11120.4°120.0°
N16C17C18H12120.4°120.1°
N16C17H11H12118.9°120.0°
O20C18C17H1156.7°60.0°
O20C18C17H1262.5°59.9°
C18C17H11H12118.9°120.0°
C17C18O20H13178.6°180.0°
O21C22C23C31179.5°179.9°
O21C22C23C24178.1°180.0°
O21C22C31N323.5°0.1°
O21C22C31N30178.4°180.0°
C22O21C2H647.1°35.3°
O21C22C23H141.9°0.1°
C22C23C24H14180.0°180.0°
C22C23C24C25179.4°180.0°
C22C23C24C290.6°0.0°
C23C22C31N32176.9°180.0°
C23C22C31N301.1°0.0°
C23C24C25C29178.8°180.0°
C23C24C25C26179.7°180.0°
C24C23C22C311.4°0.0°
C23C24C29N300.6°0.0°
C23C24C29C28178.4°180.0°
C23C24C25H150.3°0.0°
C24C25C26H15180.0°180.0°
C24C25C26F33176.7°179.7°
C24C25C26C272.4°0.0°
C25C24C29N30178.3°180.0°
C25C24C29C280.5°0.0°
C25C24C23H140.6°0.0°
C26C25C24C290.9°0.0°
C25C26F33C27179.1°179.7°
C25C26C27C282.3°0.0°
C25C26C27H16177.7°180.0°
C22C31N32N30178.2°180.0°
C22C31N30C290.0°0.0°
C31C22C23H14178.6°180.0°
C22C31N32H18178.2°0.1°
C22C31N32H1958.2°180.0°
C24C29N30C310.9°0.0°
C24C29N30C28177.8°180.0°
C24C29C28C270.5°0.0°
C29C24C23H14179.4°180.0°
C29C24C25H15179.1°180.0°
C24C29C28H17179.5°180.0°
F33C26C27C28176.7°179.7°
F33C26C25H153.3°0.3°
F33C26C27H163.3°0.3°
C26C27C28C290.8°0.0°
C26C27C28H16180.0°180.0°
C27C26C25H15177.6°180.0°
C26C27C28H17179.2°180.0°
N32C31N30C29178.1°180.0°
C31N32H18H19120.0°179.9°
C31N30C29C28178.7°180.0°
N30C31N32H180.0°179.9°
N30C31N32H19120.0°0.0°
N30C29C28C27178.4°180.0°
N30C29C28H171.6°0.0°
C29C28C27H17180.0°180.0°
C29C28C27H16179.2°180.0°
H3C1H4H5120.0°119.9°
H3C1C2H658.9°60.0°
H4C1C2H6178.9°60.0°
H5C1C2H661.1°180.0°
H7C10C11H82.6°0.0°
H8C11C12H91.4°0.0°
H16C27C28H170.8°0.0°

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon