Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

VON

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O11C6doub1.21Å1.26Å
C6O12sing1.34Å1.25Å
C6C5sing1.51Å1.52Å
C5C4sing1.53Å1.51Å
C5C7sing1.53Å1.52Å
C4O10sing1.43Å1.46Å
C4C3sing1.53Å1.54Å
C7N1sing1.47Å1.51Å
C3O9sing1.43Å1.43Å
C3C2sing1.53Å1.54Å
N1C2sing1.47Å1.49Å
C2O8sing1.43Å1.41Å
N1H1sing1.01Å1.00Å
C2H3sing1.09Å1.10Å
C3H4sing1.09Å1.10Å
C4H5sing1.09Å1.10Å
C5H6sing1.09Å1.10Å
C7H7sing1.09Å1.10Å
C7H8sing1.09Å1.10Å
O8H9sing0.97Å0.95Å
O9H10sing0.97Å0.95Å
O10H11sing0.97Å0.95Å
O12H12sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O11C6O12124.7°120.0°
O11C6C5116.8°120.0°
O12C6C5118.5°120.1°
C6O12H12109.5°117.1°
C6C5C4112.9°109.5°
C6C5C7107.8°109.5°
C6C5H6108.0°109.5°
C4C5C7111.7°109.3°
C5C4O10105.5°109.6°
C5C4C3113.1°109.1°
C5C4H5109.9°109.6°
C4C5H6108.2°109.5°
C5C7N1109.1°109.5°
C7C5H6108.1°109.5°
C5C7H7109.6°109.4°
C5C7H8109.6°109.5°
O10C4C3108.1°109.5°
O10C4H5110.6°109.6°
C4O10H11109.5°114.0°
C4C3O9111.7°109.5°
C4C3C2112.9°109.3°
C4C3H4107.3°109.6°
C3C4H5109.5°109.5°
C7N1C2114.7°111.2°
C7N1H1108.1°111.0°
N1C7H7109.6°109.4°
N1C7H8109.6°109.5°
O9C3C2108.7°109.5°
O9C3H4108.7°109.5°
C3O9H10109.5°114.0°
C3C2N1108.6°109.5°
C3C2O8112.6°109.5°
C3C2H3108.4°109.5°
C2C3H4107.4°109.5°
N1C2O8108.0°109.4°
C2N1H1108.2°111.0°
N1C2H3109.1°109.4°
O8C2H3110.1°109.5°
C2O8H9109.5°114.0°
H7C7H8109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O11C6O12C5178.9°180.0°
O11C6C5C474.6°0.0°
O11C6C5C7161.6°119.8°
O11C6C5H645.1°120.1°
O11C6O12H120.0°0.0°
O12C6C5C4106.5°180.0°
O12C6C5C717.4°60.2°
O12C6C5H6133.9°59.9°
C6C5C4C7121.6°119.9°
C6C5C4H6119.5°120.1°
C6C5C7H6116.5°120.1°
C6C5C4O1055.2°57.7°
C6C5C4C3173.2°177.6°
C6C5C7N1179.4°179.1°
C6C5C4H564.1°62.5°
C6C5C7H760.7°59.2°
C6C5C7H859.5°60.8°
C5C6O12H12178.9°180.0°
C4C5C7H6118.9°120.0°
C5C4O10C3121.2°119.6°
C5C4O10H5118.9°120.2°
C5C4C3H5122.9°119.9°
C4C5C7N154.8°59.2°
C5C4C3O9172.6°177.6°
C5C4C3C249.7°57.7°
C5C4C3H468.4°62.3°
C4C5C7H7174.8°60.8°
C4C5C7H865.1°179.2°
C5C4O10H11180.0°179.7°
C7C5C4O1066.4°62.2°
C7C5C4C351.5°57.7°
C5C7N1H7120.0°119.9°
C5C7N1H8119.9°120.0°
C5C7N1C260.0°61.7°
C5C7N1H160.7°62.4°
C7C5C4H5174.2°177.6°
C5C7H7H8120.2°120.0°
O10C4C3H5120.6°120.2°
O10C4C3O956.1°57.7°
O10C4C3C266.7°62.2°
O10C4C3H4175.2°177.8°
O10C4C5H6174.7°177.8°
C4C3O9C2125.2°119.8°
C4C3O9H4118.2°120.2°
C4C3C2H4118.1°120.0°
C4C3C2N150.5°59.2°
C4C3C2O8170.0°179.2°
C4C3C2H367.8°60.7°
C3C4C5H667.3°62.3°
C4C3O9H10180.0°179.7°
C3C4O10H1158.8°60.1°
C7N1C2C357.3°61.7°
C7N1C2H1120.8°124.1°
C7N1C2O8179.7°178.3°
C7N1C2H360.6°58.3°
N1C7C5H664.1°60.8°
N1C7H7H8120.2°120.0°
O9C3C2H4117.4°120.0°
O9C3C2N1175.0°179.1°
O9C3C2O865.5°60.9°
O9C3C2H356.6°59.2°
O9C3C4H564.5°62.5°
C3C2N1O8122.4°120.0°
C3C2N1H3118.0°120.0°
C3C2O8H3121.2°120.0°
C3C2N1H163.4°62.3°
C2C3C4H5172.7°177.6°
C3C2O8H9180.0°180.0°
C2C3O9H1054.8°59.9°
N1C2O8H3119.0°119.9°
N1C2C3H467.6°60.8°
C2N1C7H7180.0°58.3°
C2N1C7H859.9°178.3°
N1C2O8H960.1°60.0°
O8C2N1H158.9°57.7°
O8C2C3H451.9°59.2°
H1N1C2H3178.6°177.7°
H1N1C7H759.2°177.7°
H1N1C7H8179.3°57.7°
H3C2C3H4174.1°179.2°
H3C2O8H958.8°60.0°
H4C3C4H554.6°57.6°
H4C3O9H1061.8°60.1°
H5C4C5H655.4°57.6°
H5C4O10H1161.1°60.1°
H6C5C7H755.8°179.2°
H6C5C7H8176.0°59.2°

246704

PDB entries from 2025-12-24

PDB statisticsPDBj update infoContact PDBjnumon