Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

VO8

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C9C8doub1.38Å1.39ÅAromatic
C9C10sing1.38Å1.37ÅAromatic
C8C7sing1.39Å1.39ÅAromatic
C10C11doub1.38Å1.39ÅAromatic
C1C2sing1.53Å1.31Å
O2C4doub1.22Å1.23Å
C6O3sing1.43Å1.42Å
C6C5sing1.53Å1.49Å
C7O3sing1.36Å1.36Å
C7C12doub1.39Å1.39ÅAromatic
C2C3sing1.51Å1.34Å
C11C12sing1.39Å1.37ÅAromatic
C4N2sing1.35Å1.38Å
C4N1sing1.35Å1.39Å
C5N2sing1.46Å1.46Å
C12O4sing1.36Å1.39Å
N2C24sing1.39Å1.38Å
C3N1sing1.35Å1.39Å
C3O1doub1.21Å1.22Å
N1C29sing1.40Å1.41Å
O4C13sing1.36Å1.38Å
C24C29doub1.40Å1.39ÅAromatic
C24C25sing1.39Å1.38ÅAromatic
C29C28sing1.39Å1.38ÅAromatic
C14C13doub1.38Å1.35ÅAromatic
C14C15sing1.39Å1.40ÅAromatic
C13C23sing1.41Å1.41ÅAromatic
C25C26doub1.38Å1.39ÅAromatic
C15C16doub1.36Å1.36ÅAromatic
C28C27doub1.38Å1.38ÅAromatic
C23C22doub1.41Å1.41ÅAromatic
C23C17sing1.42Å1.41ÅAromatic
C26C27sing1.38Å1.38ÅAromatic
C22C21sing1.36Å1.36ÅAromatic
C16C17sing1.41Å1.41ÅAromatic
C17C18doub1.40Å1.41ÅAromatic
C21C19doub1.41Å1.40ÅAromatic
C18C19sing1.39Å1.38ÅAromatic
C19C20sing1.43Å1.44Å
C20N3trip1.14Å1.15Å
C10H10sing1.08Å1.08Å
C1H22sing1.09Å1.10Å
C1H1sing1.09Å1.10Å
C2H3sing1.09Å1.10Å
C5H5sing1.09Å1.10Å
C5H4sing1.09Å1.10Å
C6H7sing1.09Å1.10Å
C6H6sing1.09Å1.10Å
C8H8sing1.08Å1.08Å
C9H9sing1.08Å1.08Å
C11H11sing1.08Å1.08Å
C14H12sing1.08Å1.08Å
C15H13sing1.08Å1.08Å
C16H14sing1.08Å1.08Å
C18H15sing1.08Å1.08Å
C21H16sing1.08Å1.08Å
C22H17sing1.08Å1.08Å
C25H18sing1.08Å1.08Å
C26H19sing1.08Å1.08Å
C27H20sing1.08Å1.08Å
C28H21sing1.08Å1.08Å
C1H2sing1.09Å1.10Å
C2H23sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C8C9C10120.1°120.1°
C9C8C7119.9°120.0°
C9C8H8120.0°120.0°
C8C9H9119.9°120.0°
C9C10C11120.2°120.2°
C9C10H10119.9°119.9°
C10C9H9119.9°119.9°
C8C7O3125.3°120.1°
C8C7C12119.4°119.8°
C7C8H8120.0°120.0°
C10C11C12119.9°120.0°
C11C10H10119.9°119.9°
C10C11H11120.0°119.9°
C1C2C3124.0°109.5°
C2C1H22109.5°109.4°
C2C1H1109.5°109.4°
C1C2H3105.7°109.5°
C2C1H2109.5°109.5°
C1C2H23105.7°109.4°
O2C4N2126.4°125.2°
O2C4N1127.6°125.1°
O3C6C5107.0°109.5°
C6O3C7117.5°117.0°
O3C6H7110.1°109.5°
O3C6H6110.1°109.5°
C6C5N2111.2°109.5°
C6C5H5109.0°109.5°
C6C5H4109.0°109.5°
C5C6H7110.1°109.5°
C5C6H6110.1°109.5°
O3C7C12115.3°120.1°
C7C12C11120.4°119.9°
C7C12O4119.0°120.1°
C2C3N1122.9°120.0°
C2C3O1118.8°120.0°
C3C2H3105.7°109.5°
C3C2H23105.8°109.5°
C11C12O4120.6°120.1°
C12C11H11120.0°120.1°
N2C4N1106.0°109.7°
C4N2C5122.6°125.8°
C4N2C24110.9°108.4°
C4N1C3125.0°125.9°
C4N1C29108.9°108.3°
C5N2C24126.5°125.8°
N2C5H5109.0°109.5°
N2C5H4109.0°109.4°
C12O4C13116.9°118.0°
N2C24C29107.1°106.8°
N2C24C25131.1°133.3°
N1C3O1118.3°120.0°
C3N1C29126.0°125.8°
N1C29C24107.1°106.7°
N1C29C28131.4°133.3°
O4C13C14122.8°120.3°
O4C13C23116.4°120.2°
C29C24C25121.8°119.9°
C24C29C28121.6°119.9°
C24C25C26116.5°119.9°
C24C25H18121.8°120.1°
C29C28C27116.7°119.8°
C29C28H21121.7°120.1°
C13C14C15120.1°120.8°
C14C13C23120.8°119.5°
C13C14H12120.0°119.6°
C14C15C16120.9°121.0°
C15C14H12119.9°119.6°
C14C15H13119.5°119.4°
C13C23C22122.0°121.0°
C13C23C17119.1°119.3°
C25C26C27121.7°120.2°
C26C25H18121.7°120.0°
C25C26H19119.1°119.9°
C15C16C17120.5°119.9°
C16C15H13119.5°119.5°
C15C16H14119.7°120.0°
C28C27C26121.7°120.3°
C28C27H20119.1°119.8°
C27C28H21121.6°120.1°
C22C23C17118.9°119.7°
C23C22C21120.6°120.0°
C23C22H17119.7°120.0°
C23C17C16118.6°119.5°
C23C17C18119.1°119.5°
C27C26H19119.2°119.9°
C26C27H20119.1°119.9°
C22C21C19121.2°120.8°
C22C21H16119.4°119.6°
C21C22H17119.7°120.0°
C16C17C18122.3°121.0°
C17C16H14119.7°120.1°
C17C18C19120.8°119.5°
C17C18H15119.6°120.2°
C21C19C18119.5°120.5°
C21C19C20120.3°119.8°
C19C21H16119.4°119.6°
C18C19C20120.2°119.7°
C19C18H15119.6°120.3°
C19C20N3177.7°179.9°
H22C1H1109.5°109.4°
H22C1H2109.4°109.6°
H1C1H2109.5°109.5°
H3C2H23109.4°109.4°
H5C5H4109.5°109.5°
H7C6H6109.4°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C8C9C10H9180.0°180.0°
C9C8C7H8180.0°179.7°
C8C9C10C110.0°0.0°
C9C8C7O3179.8°179.7°
C9C8C7C120.2°0.8°
C8C9C10H10180.0°179.7°
C10C9C8C70.1°0.6°
C9C10C11H10180.0°179.8°
C9C10C11C120.5°0.2°
C10C9C8H8179.9°179.7°
C9C10C11H11179.5°179.7°
C8C7O3C630.8°0.5°
C8C7O3C12180.0°179.4°
C8C7C12C110.7°0.6°
C8C7C12O4179.3°180.0°
C7C8C9H9179.9°179.4°
C10C11C12C70.8°0.0°
C10C11C12H11180.0°179.9°
C10C11C12O4179.5°179.5°
C11C10C9H9180.0°180.0°
C1C2C3H3122.0°120.0°
C1C2C3H23122.0°120.0°
C1C2C3N111.6°180.0°
C1C2C3O1170.1°0.1°
C2C1H22H1120.0°119.9°
C2C1H22H2120.0°120.1°
C2C1H1H2120.0°120.0°
C1C2H3H23113.5°119.9°
O2C4N2N1179.8°180.0°
O2C4N2C50.6°0.0°
O2C4N2C24179.6°180.0°
O2C4N1C30.5°0.0°
O2C4N1C29179.8°179.8°
O3C6C5H7119.6°120.1°
O3C6C5H6119.6°120.0°
C6O3C7C12149.2°179.9°
O3C6C5N270.2°65.0°
O3C6C5H550.1°55.0°
O3C6C5H4169.6°175.0°
O3C6H7H6121.1°120.0°
C5C6O3C7157.0°180.0°
C6C5N2C486.4°90.0°
C6C5N2H5120.3°120.0°
C6C5N2H4120.3°120.0°
C6C5N2C2492.5°90.0°
C6C5H5H4119.2°120.0°
C5C6H7H6121.1°120.0°
O3C7C12C11179.3°180.0°
O3C7C12O40.6°0.6°
C7O3C6H783.3°60.0°
C7O3C6H637.4°60.0°
O3C7C8H80.2°0.0°
C7C12C11O4178.6°179.4°
C7C12O4C13104.6°174.2°
C12C7C8H8179.8°179.4°
C7C12C11H11179.2°180.0°
C2C3N1C44.2°0.3°
C2C3N1O1178.3°179.9°
C2C3N1C29176.5°180.0°
C3C2C1H22180.0°59.9°
C3C2C1H160.0°59.9°
C3C2H3H23113.5°120.0°
C3C2C1H260.0°179.9°
C11C12O4C1374.0°5.3°
C12C11C10H10179.5°180.0°
C4N2C5C24178.9°180.0°
N2C4N1C3179.7°180.0°
N2C4N1C290.4°0.2°
C4N2C24C290.5°0.3°
C4N2C24C25179.9°179.9°
C4N2C5H5153.3°150.0°
C4N2C5H433.9°30.0°
N1C4N2C5179.6°180.0°
N1C4N2C240.5°0.0°
C4N1C3C29179.2°179.7°
C4N1C3O1174.0°179.8°
C4N1C29C240.1°0.4°
C4N1C29C28180.0°179.5°
C5N2C24C29179.5°179.7°
C5N2C24C250.9°0.0°
N2C5H5H4119.2°120.0°
N2C5C6H7170.2°174.9°
N2C5C6H649.5°55.0°
C12O4C13C1432.6°94.1°
C12O4C13C23146.9°85.6°
O4C12C11H110.6°0.6°
N2C24C29N10.2°0.4°
N2C24C29C25179.7°179.8°
N2C24C29C28179.7°179.6°
N2C24C25C26179.5°180.0°
C24N2C5H527.7°30.0°
C24N2C5H4147.2°150.0°
N2C24C25H180.5°0.0°
C3N1C29C24179.4°179.8°
C3N1C29C280.7°0.8°
N1C3C2H3133.6°59.9°
N1C3C2H23110.3°60.0°
O1C3N1C295.2°0.0°
O1C3C2H348.1°120.0°
O1C3C2H2367.9°120.1°
N1C29C24C28179.9°179.2°
N1C29C24C25179.9°179.8°
N1C29C28C27180.0°179.5°
N1C29C28H210.0°0.6°
O4C13C14C23179.5°179.7°
O4C13C14C15179.7°180.0°
O4C13C23C220.1°0.6°
O4C13C23C17179.7°179.7°
O4C13C14H120.3°0.1°
C29C24C25C260.1°0.3°
C24C29C28C270.1°0.6°
C29C24C25H18179.9°179.7°
C24C29C28H21179.9°179.6°
C25C24C29C280.0°0.6°
C24C25C26H18180.0°180.0°
C24C25C26C270.3°0.0°
C24C25C26H19179.8°180.0°
C29C28C27H21180.0°179.8°
C29C28C27C260.3°0.3°
C29C28C27H20179.8°179.8°
C13C14C15H12180.0°179.9°
C13C14C15C160.1°0.0°
C14C13C23C22179.6°179.7°
C14C13C23C170.2°0.6°
C13C14C15H13179.9°180.0°
C15C14C13C230.2°0.3°
C14C15C16H13180.0°180.0°
C14C15C16C170.1°0.1°
C14C15C16H14179.9°180.0°
C13C23C22C17179.8°179.1°
C13C23C22C21179.7°179.7°
C13C23C17C160.1°0.6°
C13C23C17C18179.9°179.7°
C23C13C14H12179.8°179.8°
C13C23C22H170.3°0.6°
C25C26C27C280.4°0.0°
C25C26C27H19180.0°180.0°
C25C26C27H20179.7°179.9°
C15C16C17C230.1°0.3°
C15C16C17H14180.0°179.9°
C15C16C17C18179.9°180.0°
C16C15C14H12180.0°180.0°
C28C27C26H20180.0°180.0°
C28C27C26H19179.6°180.0°
C23C22C21H17180.0°179.7°
C22C23C17C16179.8°179.7°
C22C23C17C180.2°0.6°
C23C22C21C190.3°0.3°
C23C22C21H16179.7°179.7°
C17C23C22C210.4°0.6°
C23C17C16C18180.0°179.7°
C23C17C18C190.1°0.3°
C23C17C16H14179.9°179.7°
C23C17C18H15180.0°179.8°
C17C23C22H17179.6°179.7°
C27C26C25H18179.7°180.0°
C26C27C28H21179.7°179.9°
C22C21C19H16180.0°180.0°
C22C21C19C180.0°0.0°
C22C21C19C20179.4°180.0°
C16C17C18C19179.9°180.0°
C17C16C15H13179.9°179.9°
C16C17C18H150.1°0.1°
C17C18C19C210.2°0.0°
C17C18C19H15180.0°179.9°
C17C18C19C20179.5°180.0°
C18C17C16H140.1°0.1°
C21C19C18C20179.4°180.0°
C21C19C20N397.2°52.8°
C21C19C18H15179.8°180.0°
C19C21C22H17179.7°180.0°
C18C19C20N382.1°127.2°
C18C19C21H16180.0°180.0°
C20C19C18H150.5°0.1°
C20C19C21H160.6°0.0°
H10C10C9H90.0°0.3°
H10C10C11H110.5°0.0°
H22C1H1H2120.0°120.1°
H22C1C2H358.0°60.1°
H22C1C2H2358.0°180.0°
H1C1C2H362.0°180.0°
H1C1C2H23178.0°60.1°
H3C2C1H2178.0°60.0°
H5C5C6H769.5°65.0°
H5C5C6H6169.7°175.0°
H4C5C6H749.9°55.0°
H4C5C6H670.8°65.0°
H8C8C9H90.1°0.3°
H12C14C15H130.0°0.0°
H13C15C16H140.1°0.0°
H16C21C22H170.3°0.0°
H18C25C26H190.2°0.0°
H19C26C27H200.3°0.1°
H20C27C28H210.3°0.1°
H2C1C2H2362.0°59.9°

224931

PDB entries from 2024-09-11

PDB statisticsPDBj update infoContact PDBjnumon