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VO5

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C5C4doub1.38Å1.37ÅAromatic
C5C6sing1.38Å1.37ÅAromatic
C4C3sing1.38Å1.37ÅAromatic
C6C7doub1.39Å1.36ÅAromatic
C3C2doub1.38Å1.38ÅAromatic
C7C2sing1.39Å1.38ÅAromatic
C7O2sing1.36Å1.32Å
C2Ssing1.76Å1.64Å
C8O2sing1.43Å1.38Å
OSdoub1.42Å1.36Å
SO1doub1.42Å1.35Å
SNsing1.66Å1.60Å
CC1sing1.53Å1.51Å
NC1sing1.47Å1.45Å
C8H1sing1.09Å1.10Å
C8H2sing1.09Å1.10Å
C8H3sing1.09Å1.10Å
C1H4sing1.09Å1.10Å
C1H5sing1.09Å1.10Å
C5H6sing1.08Å1.08Å
C6H7sing1.08Å1.08Å
C4H8sing1.08Å1.08Å
C3H9sing1.08Å1.08Å
NH10sing0.97Å1.00Å
CH11sing1.09Å1.10Å
CH12sing1.09Å1.10Å
CH13sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C4C5C6120.5°120.1°
C5C4C3120.6°120.1°
C4C5H6119.8°119.9°
C5C4H8119.7°120.0°
C5C6C7117.8°119.9°
C6C5H6119.8°120.0°
C5C6H7121.1°120.0°
C4C3C2120.7°120.1°
C3C4H8119.7°119.9°
C4C3H9119.7°120.0°
C6C7C2123.8°119.9°
C6C7O2123.6°120.0°
C7C6H7121.1°120.0°
C3C2C7116.6°119.9°
C3C2S118.9°120.0°
C2C3H9119.6°120.0°
C2C7O2112.7°120.0°
C7C2S124.5°120.0°
C7O2C8120.0°117.0°
C2SO107.2°106.4°
C2SO1108.3°106.4°
C2SN105.6°107.2°
O2C8H1109.5°109.4°
O2C8H2109.5°109.5°
O2C8H3109.5°109.4°
OSO1119.5°123.2°
OSN108.4°106.4°
O1SN107.0°106.4°
SNC1124.2°120.0°
SNH10105.6°120.0°
CC1N110.0°109.4°
CC1H4109.3°109.5°
CC1H5109.4°109.5°
C1CH11109.5°109.5°
C1CH12109.4°109.5°
C1CH13109.5°109.4°
NC1H4109.4°109.4°
NC1H5109.3°109.5°
C1NH10105.7°120.0°
H1C8H2109.5°109.5°
H1C8H3109.5°109.5°
H2C8H3109.4°109.5°
H4C1H5109.5°109.5°
H11CH12109.5°109.5°
H11CH13109.5°109.5°
H12CH13109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C4C5C6H6180.0°179.7°
C5C4C3H8180.0°179.7°
C4C5C6C70.2°0.0°
C5C4C3C20.8°0.6°
C4C5C6H7179.8°180.0°
C5C4C3H9179.2°180.0°
C6C5C4C30.2°0.3°
C5C6C7H7180.0°179.9°
C5C6C7C20.1°0.0°
C5C6C7O2179.5°179.8°
C6C5C4H8179.8°180.0°
C4C3C2H9180.0°179.5°
C4C3C2C70.9°0.6°
C4C3C2S178.0°179.4°
C3C4C5H6179.8°180.0°
C6C7C2C30.4°0.3°
C6C7C2O2179.6°179.7°
C6C7C2S178.4°179.7°
C6C7O2C80.4°0.3°
C7C6C5H6179.8°179.7°
C3C2C7S178.8°180.0°
C3C2C7O2179.9°180.0°
C3C2SO3.4°131.5°
C3C2SO1133.6°1.4°
C3C2SN112.0°115.0°
C2C3C4H8179.2°179.7°
C2C7O2C8179.2°180.0°
C7C2SO177.8°48.6°
C7C2SO147.6°178.5°
C7C2SN66.8°65.0°
C2C7C6H7179.9°180.0°
C7C2C3H9179.1°180.0°
O2C7C2S1.2°0.0°
C7O2C8H1180.0°60.0°
C7O2C8H260.0°180.0°
C7O2C8H360.0°60.0°
O2C7C6H70.5°0.3°
C2SOO1123.6°122.9°
C2SON113.5°114.1°
C2SO1N113.4°114.1°
C2SNC157.1°65.0°
SC2C3H92.0°0.0°
C2SNH10179.1°115.0°
O2C8H1H2120.0°120.0°
O2C8H1H3120.0°119.9°
O2C8H2H3120.0°120.0°
OSO1N123.6°123.0°
OSNC157.5°48.5°
OSNH1064.5°131.5°
O1SNC1172.3°178.5°
O1SNH1065.7°1.4°
SNC1C85.8°165.0°
SNC1H10122.0°180.0°
SNC1H4154.2°75.0°
SNC1H534.3°45.0°
CC1NH4120.1°120.0°
CC1NH5120.1°120.0°
CC1H4H5119.8°120.0°
CC1NH10152.2°15.0°
C1CH11H12120.0°120.0°
C1CH11H13120.0°119.9°
C1CH12H13120.0°119.9°
NC1H4H5119.7°120.0°
NC1CH11180.0°60.0°
NC1CH1260.0°60.0°
NC1CH1360.0°180.0°
H1C8H2H3120.0°120.1°
H4C1NH1032.2°105.0°
H4C1CH1159.9°180.0°
H4C1CH1260.1°59.9°
H4C1CH13179.9°60.1°
H5C1NH1087.6°135.0°
H5C1CH1159.9°60.0°
H5C1CH12179.9°180.0°
H5C1CH1360.1°60.0°
H6C5C6H70.2°0.3°
H6C5C4H80.2°0.3°
H8C4C3H90.8°0.3°
H11CH12H13120.0°120.0°

225946

PDB entries from 2024-10-09

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