VNI
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
C1 | O1 | doub | 1.22Å | 1.22Å | |
C13 | C1 | sing | 1.48Å | 1.50Å | |
N1 | C1 | sing | 1.35Å | 1.32Å | |
N1 | C2 | sing | 1.46Å | 1.44Å | |
N1 | HN1 | sing | 0.97Å | 1.00Å | |
C7 | C2 | sing | 1.51Å | 1.47Å | |
C3 | C2 | sing | 1.53Å | 1.56Å | |
C2 | H2 | sing | 1.09Å | 1.10Å | |
C3 | N2 | sing | 1.46Å | 1.46Å | |
C3 | H3 | sing | 1.09Å | 1.10Å | |
C3 | H3A | sing | 1.09Å | 1.10Å | |
C6 | N2 | sing | 1.35Å | 1.32Å | Aromatic |
N2 | C4 | sing | 1.37Å | 1.35Å | Aromatic |
C4 | C5 | doub | 1.35Å | 1.35Å | Aromatic |
C4 | H4 | sing | 1.08Å | 1.08Å | |
N3 | C5 | sing | 1.34Å | 1.36Å | Aromatic |
C5 | H5 | sing | 1.08Å | 1.08Å | |
C6 | N3 | doub | 1.30Å | 1.34Å | Aromatic |
C6 | H6 | sing | 1.08Å | 1.08Å | |
C8 | C7 | doub | 1.38Å | 1.41Å | Aromatic |
C7 | C12 | sing | 1.38Å | 1.38Å | Aromatic |
C9 | C8 | sing | 1.38Å | 1.37Å | Aromatic |
C8 | H8 | sing | 1.08Å | 1.08Å | |
C9 | C10 | doub | 1.38Å | 1.40Å | Aromatic |
C9 | H9 | sing | 1.08Å | 1.08Å | |
CL1 | C10 | sing | 1.74Å | 1.76Å | |
C10 | C11 | sing | 1.38Å | 1.37Å | Aromatic |
C11 | C12 | doub | 1.38Å | 1.37Å | Aromatic |
C11 | H11 | sing | 1.08Å | 1.08Å | |
C12 | CL2 | sing | 1.74Å | 1.75Å | |
C14 | C13 | doub | 1.40Å | 1.38Å | Aromatic |
C13 | C18 | sing | 1.40Å | 1.38Å | Aromatic |
C15 | C14 | sing | 1.38Å | 1.38Å | Aromatic |
C14 | H14 | sing | 1.08Å | 1.08Å | |
C15 | C16 | doub | 1.40Å | 1.38Å | Aromatic |
C15 | H15 | sing | 1.08Å | 1.08Å | |
C19 | C16 | sing | 1.48Å | 1.39Å | Aromatic |
C16 | C17 | sing | 1.40Å | 1.38Å | Aromatic |
C17 | C18 | doub | 1.38Å | 1.40Å | Aromatic |
C17 | H17 | sing | 1.08Å | 1.08Å | |
C18 | H18 | sing | 1.08Å | 1.08Å | |
N4 | C19 | doub | 1.31Å | 1.36Å | Aromatic |
C19 | O2 | sing | 1.35Å | 1.36Å | Aromatic |
N5 | N4 | sing | 1.29Å | 1.40Å | Aromatic |
N5 | C20 | doub | 1.31Å | 1.35Å | Aromatic |
C20 | C21 | sing | 1.48Å | 1.40Å | Aromatic |
C20 | O2 | sing | 1.35Å | 1.37Å | Aromatic |
C26 | C21 | doub | 1.40Å | 1.39Å | Aromatic |
C21 | C22 | sing | 1.40Å | 1.40Å | Aromatic |
C22 | C23 | doub | 1.38Å | 1.40Å | Aromatic |
C22 | H22 | sing | 1.08Å | 1.08Å | |
C24 | C23 | sing | 1.38Å | 1.39Å | Aromatic |
C23 | H23 | sing | 1.08Å | 1.08Å | |
C25 | C24 | doub | 1.38Å | 1.40Å | Aromatic |
C24 | H24 | sing | 1.08Å | 1.08Å | |
C26 | C25 | sing | 1.38Å | 1.40Å | Aromatic |
C25 | H25 | sing | 1.08Å | 1.08Å | |
C26 | H26 | sing | 1.08Å | 1.08Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
O1 | C1 | C13 | 120.4° | 120.0° |
O1 | C1 | N1 | 119.3° | 120.0° |
C13 | C1 | N1 | 120.2° | 120.0° |
C1 | C13 | C14 | 121.0° | 120.0° |
C1 | C13 | C18 | 120.9° | 120.0° |
C1 | N1 | C2 | 120.6° | 120.0° |
C1 | N1 | HN1 | 119.7° | 120.0° |
C2 | N1 | HN1 | 119.7° | 120.0° |
N1 | C2 | C7 | 112.5° | 109.4° |
N1 | C2 | C3 | 101.1° | 109.5° |
N1 | C2 | H2 | 114.9° | 109.5° |
C7 | C2 | C3 | 114.5° | 109.4° |
C7 | C2 | H2 | 101.5° | 109.5° |
C2 | C7 | C8 | 122.1° | 120.0° |
C2 | C7 | C12 | 118.9° | 120.0° |
C3 | C2 | H2 | 112.9° | 109.5° |
C2 | C3 | N2 | 114.6° | 109.5° |
C2 | C3 | H3 | 107.8° | 109.5° |
C2 | C3 | H3A | 106.6° | 109.5° |
N2 | C3 | H3 | 107.8° | 109.4° |
N2 | C3 | H3A | 106.6° | 109.5° |
C3 | N2 | C6 | 125.1° | 126.4° |
C3 | N2 | C4 | 126.9° | 126.4° |
H3 | C3 | H3A | 113.6° | 109.5° |
C6 | N2 | C4 | 108.0° | 107.2° |
N2 | C6 | N3 | 109.6° | 108.7° |
N2 | C6 | H6 | 125.2° | 125.6° |
N2 | C4 | C5 | 107.5° | 106.8° |
N2 | C4 | H4 | 126.3° | 126.6° |
C5 | C4 | H4 | 126.3° | 126.5° |
C4 | C5 | N3 | 107.7° | 108.0° |
C4 | C5 | H5 | 126.1° | 126.0° |
N3 | C5 | H5 | 126.2° | 126.0° |
C5 | N3 | C6 | 107.1° | 109.3° |
N3 | C6 | H6 | 125.2° | 125.7° |
C8 | C7 | C12 | 118.9° | 120.0° |
C7 | C8 | C9 | 118.2° | 120.0° |
C7 | C8 | H8 | 120.9° | 120.0° |
C7 | C12 | C11 | 123.7° | 120.0° |
C7 | C12 | CL2 | 117.8° | 120.0° |
C9 | C8 | H8 | 120.9° | 120.0° |
C8 | C9 | C10 | 120.9° | 120.0° |
C8 | C9 | H9 | 119.5° | 120.0° |
C10 | C9 | H9 | 119.5° | 120.0° |
C9 | C10 | CL1 | 119.8° | 120.0° |
C9 | C10 | C11 | 121.6° | 120.0° |
CL1 | C10 | C11 | 118.6° | 120.0° |
C10 | C11 | C12 | 116.6° | 120.0° |
C10 | C11 | H11 | 121.7° | 120.0° |
C12 | C11 | H11 | 121.7° | 120.0° |
C11 | C12 | CL2 | 118.4° | 120.0° |
C14 | C13 | C18 | 118.0° | 120.0° |
C13 | C14 | C15 | 121.7° | 120.0° |
C13 | C14 | H14 | 119.2° | 120.0° |
C13 | C18 | C17 | 120.4° | 120.0° |
C13 | C18 | H18 | 119.8° | 120.0° |
C15 | C14 | H14 | 119.2° | 120.0° |
C14 | C15 | C16 | 120.5° | 120.0° |
C14 | C15 | H15 | 119.8° | 120.0° |
C16 | C15 | H15 | 119.8° | 120.0° |
C15 | C16 | C19 | 122.2° | 120.0° |
C15 | C16 | C17 | 118.6° | 120.0° |
C19 | C16 | C17 | 119.2° | 120.0° |
C16 | C19 | N4 | 129.2° | 126.3° |
C16 | C19 | O2 | 123.3° | 126.3° |
C16 | C17 | C18 | 120.8° | 120.0° |
C16 | C17 | H17 | 119.6° | 120.0° |
C18 | C17 | H17 | 119.6° | 120.1° |
C17 | C18 | H18 | 119.8° | 120.0° |
N4 | C19 | O2 | 107.5° | 107.4° |
C19 | N4 | N5 | 107.3° | 109.4° |
C19 | O2 | C20 | 109.6° | 106.4° |
N4 | N5 | C20 | 108.4° | 109.4° |
N5 | C20 | C21 | 128.0° | 126.3° |
N5 | C20 | O2 | 107.2° | 107.5° |
C21 | C20 | O2 | 124.8° | 126.2° |
C20 | C21 | C26 | 120.4° | 120.2° |
C20 | C21 | C22 | 120.6° | 120.1° |
C26 | C21 | C22 | 119.0° | 119.7° |
C21 | C26 | C25 | 121.2° | 119.9° |
C21 | C26 | H26 | 119.4° | 120.1° |
C21 | C22 | C23 | 120.2° | 119.8° |
C21 | C22 | H22 | 119.9° | 120.1° |
C23 | C22 | H22 | 119.9° | 120.1° |
C22 | C23 | C24 | 120.1° | 120.2° |
C22 | C23 | H23 | 119.9° | 119.9° |
C24 | C23 | H23 | 119.9° | 119.9° |
C23 | C24 | C25 | 120.3° | 120.3° |
C23 | C24 | H24 | 119.8° | 119.8° |
C25 | C24 | H24 | 119.9° | 119.9° |
C24 | C25 | C26 | 119.1° | 120.1° |
C24 | C25 | H25 | 120.4° | 119.9° |
C26 | C25 | H25 | 120.4° | 119.9° |
C25 | C26 | H26 | 119.4° | 120.1° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
O1 | C1 | C13 | N1 | 177.9° | 179.8° |
O1 | C1 | N1 | C2 | 3.0° | 0.1° |
O1 | C1 | N1 | HN1 | 177.0° | 180.0° |
O1 | C1 | C13 | C14 | 174.5° | 179.8° |
O1 | C1 | C13 | C18 | 9.4° | 0.0° |
C13 | C1 | N1 | C2 | 174.9° | 179.7° |
C13 | C1 | N1 | HN1 | 5.1° | 0.2° |
C1 | C13 | C14 | C18 | 176.2° | 179.8° |
C1 | C13 | C14 | C15 | 176.9° | 180.0° |
C1 | C13 | C14 | H14 | 3.1° | 0.1° |
C1 | C13 | C18 | C17 | 178.5° | 179.8° |
C1 | C13 | C18 | H18 | 1.5° | 0.0° |
C1 | N1 | C2 | HN1 | 180.0° | 179.9° |
C1 | N1 | C2 | C7 | 150.4° | 85.2° |
C1 | N1 | C2 | C3 | 87.0° | 154.9° |
C1 | N1 | C2 | H2 | 34.9° | 34.8° |
N1 | C1 | C13 | C14 | 7.6° | 0.0° |
N1 | C1 | C13 | C18 | 168.5° | 179.8° |
N1 | C2 | C7 | C3 | 114.7° | 120.0° |
N1 | C2 | C7 | H2 | 123.4° | 120.0° |
N1 | C2 | C3 | H2 | 123.3° | 120.0° |
N1 | C2 | C3 | N2 | 171.9° | 65.0° |
N1 | C2 | C3 | H3 | 51.9° | 55.0° |
N1 | C2 | C3 | H3A | 70.4° | 175.0° |
N1 | C2 | C7 | C8 | 82.0° | 28.8° |
N1 | C2 | C7 | C12 | 99.9° | 150.9° |
HN1 | N1 | C2 | C7 | 29.6° | 95.0° |
HN1 | N1 | C2 | C3 | 93.0° | 25.0° |
HN1 | N1 | C2 | H2 | 145.1° | 145.1° |
C7 | C2 | C3 | H2 | 115.5° | 120.0° |
C7 | C2 | C3 | N2 | 66.9° | 175.0° |
C7 | C2 | C3 | H3 | 173.1° | 65.0° |
C7 | C2 | C3 | H3A | 50.8° | 55.0° |
C2 | C7 | C8 | C12 | 178.1° | 179.6° |
C2 | C7 | C8 | C9 | 179.3° | 180.0° |
C2 | C7 | C8 | H8 | 0.7° | 0.0° |
C2 | C7 | C12 | C11 | 179.1° | 179.7° |
C2 | C7 | C12 | CL2 | 3.1° | 0.1° |
C2 | C3 | N2 | H3 | 120.0° | 120.0° |
C2 | C3 | N2 | H3A | 117.7° | 120.0° |
C2 | C3 | H3 | H3A | 117.9° | 120.0° |
C2 | C3 | N2 | C6 | 104.8° | 90.3° |
C2 | C3 | N2 | C4 | 71.6° | 90.0° |
C3 | C2 | C7 | C8 | 32.7° | 91.2° |
C3 | C2 | C7 | C12 | 145.5° | 89.1° |
H2 | C2 | C3 | N2 | 48.6° | 55.0° |
H2 | C2 | C3 | H3 | 71.4° | 175.0° |
H2 | C2 | C3 | H3A | 166.3° | 65.0° |
H2 | C2 | C7 | C8 | 154.6° | 148.8° |
H2 | C2 | C7 | C12 | 23.5° | 30.9° |
N2 | C3 | H3 | H3A | 117.9° | 120.0° |
C3 | N2 | C6 | C4 | 177.0° | 179.8° |
C3 | N2 | C4 | C5 | 179.6° | 180.0° |
C3 | N2 | C4 | H4 | 0.4° | 0.1° |
C3 | N2 | C6 | N3 | 179.0° | 179.8° |
C3 | N2 | C6 | H6 | 1.0° | 0.1° |
H3 | C3 | N2 | C6 | 135.2° | 149.7° |
H3 | C3 | N2 | C4 | 48.4° | 30.0° |
H3A | C3 | N2 | C6 | 13.0° | 29.7° |
H3A | C3 | N2 | C4 | 170.6° | 150.0° |
C6 | N2 | C4 | C5 | 3.5° | 0.3° |
C6 | N2 | C4 | H4 | 176.5° | 179.8° |
N2 | C6 | N3 | C5 | 0.3° | 0.4° |
N2 | C6 | N3 | H6 | 180.0° | 180.0° |
N2 | C4 | C5 | H4 | 180.0° | 179.9° |
N2 | C4 | C5 | N3 | 3.6° | 0.0° |
N2 | C4 | C5 | H5 | 176.4° | 180.0° |
C4 | N2 | C6 | N3 | 2.0° | 0.4° |
C4 | N2 | C6 | H6 | 178.0° | 179.6° |
C4 | C5 | N3 | H5 | 180.0° | 180.0° |
C4 | C5 | N3 | C6 | 2.4° | 0.2° |
H4 | C4 | C5 | N3 | 176.4° | 179.9° |
H4 | C4 | C5 | H5 | 3.6° | 0.1° |
C5 | N3 | C6 | H6 | 179.7° | 179.6° |
H5 | C5 | N3 | C6 | 177.6° | 179.8° |
C7 | C8 | C9 | H8 | 180.0° | 179.9° |
C7 | C8 | C9 | C10 | 0.6° | 0.1° |
C7 | C8 | C9 | H9 | 179.4° | 179.9° |
C8 | C7 | C12 | C11 | 0.9° | 0.6° |
C8 | C7 | C12 | CL2 | 178.7° | 179.7° |
C12 | C7 | C8 | C9 | 1.1° | 0.4° |
C12 | C7 | C8 | H8 | 178.9° | 179.7° |
C7 | C12 | C11 | C10 | 0.0° | 0.6° |
C7 | C12 | C11 | CL2 | 177.8° | 179.7° |
C7 | C12 | C11 | H11 | 180.0° | 179.7° |
C8 | C9 | C10 | H9 | 180.0° | 180.0° |
C8 | C9 | C10 | CL1 | 179.8° | 179.9° |
C8 | C9 | C10 | C11 | 0.3° | 0.0° |
H8 | C8 | C9 | C10 | 179.4° | 180.0° |
H8 | C8 | C9 | H9 | 0.6° | 0.0° |
C9 | C10 | CL1 | C11 | 179.9° | 180.0° |
C9 | C10 | C11 | C12 | 0.6° | 0.3° |
C9 | C10 | C11 | H11 | 179.4° | 180.0° |
H9 | C9 | C10 | CL1 | 0.2° | 0.0° |
H9 | C9 | C10 | C11 | 179.7° | 180.0° |
CL1 | C10 | C11 | C12 | 179.5° | 179.7° |
CL1 | C10 | C11 | H11 | 0.5° | 0.0° |
C10 | C11 | C12 | H11 | 180.0° | 179.7° |
C10 | C11 | C12 | CL2 | 177.8° | 179.7° |
H11 | C11 | C12 | CL2 | 2.2° | 0.0° |
C13 | C14 | C15 | H14 | 180.0° | 179.9° |
C13 | C14 | C15 | C16 | 1.1° | 0.0° |
C13 | C14 | C15 | H15 | 178.9° | 180.0° |
C14 | C13 | C18 | C17 | 2.3° | 0.5° |
C14 | C13 | C18 | H18 | 177.7° | 179.8° |
C18 | C13 | C14 | C15 | 0.7° | 0.2° |
C18 | C13 | C14 | H14 | 179.3° | 179.7° |
C13 | C18 | C17 | C16 | 2.1° | 0.5° |
C13 | C18 | C17 | H18 | 180.0° | 179.7° |
C13 | C18 | C17 | H17 | 177.9° | 179.7° |
C14 | C15 | C16 | H15 | 180.0° | 180.0° |
C14 | C15 | C16 | C19 | 179.1° | 180.0° |
C14 | C15 | C16 | C17 | 1.3° | 0.0° |
H14 | C14 | C15 | C16 | 178.9° | 179.9° |
H14 | C14 | C15 | H15 | 1.1° | 0.1° |
C15 | C16 | C19 | C17 | 179.6° | 180.0° |
C15 | C16 | C17 | C18 | 0.3° | 0.2° |
C15 | C16 | C17 | H17 | 179.7° | 179.9° |
C15 | C16 | C19 | N4 | 0.6° | 0.4° |
C15 | C16 | C19 | O2 | 179.2° | 180.0° |
H15 | C15 | C16 | C19 | 0.9° | 0.0° |
H15 | C15 | C16 | C17 | 178.7° | 180.0° |
C19 | C16 | C17 | C18 | 179.3° | 179.8° |
C19 | C16 | C17 | H17 | 0.7° | 0.0° |
C16 | C19 | N4 | O2 | 179.8° | 179.7° |
C16 | C19 | N4 | N5 | 178.4° | 180.0° |
C16 | C19 | O2 | C20 | 177.9° | 179.9° |
C16 | C17 | C18 | H17 | 180.0° | 179.8° |
C16 | C17 | C18 | H18 | 177.9° | 179.8° |
C17 | C16 | C19 | N4 | 178.9° | 179.7° |
C17 | C16 | C19 | O2 | 1.3° | 0.0° |
H17 | C17 | C18 | H18 | 2.1° | 0.0° |
C19 | N4 | N5 | C20 | 0.4° | 0.1° |
N4 | C19 | O2 | C20 | 1.9° | 0.4° |
O2 | C19 | N4 | N5 | 1.4° | 0.3° |
C19 | O2 | C20 | N5 | 1.7° | 0.4° |
C19 | O2 | C20 | C21 | 179.4° | 179.8° |
N4 | N5 | C20 | C21 | 178.5° | 180.0° |
N4 | N5 | C20 | O2 | 0.8° | 0.2° |
N5 | C20 | C21 | O2 | 177.3° | 179.8° |
N5 | C20 | C21 | C26 | 1.9° | 179.8° |
N5 | C20 | C21 | C22 | 178.6° | 0.1° |
C20 | C21 | C26 | C22 | 179.5° | 179.7° |
C20 | C21 | C22 | C23 | 178.5° | 180.0° |
C20 | C21 | C22 | H22 | 1.4° | 0.1° |
C20 | C21 | C26 | C25 | 179.9° | 179.8° |
C20 | C21 | C26 | H26 | 0.1° | 0.0° |
O2 | C20 | C21 | C26 | 179.1° | 0.0° |
O2 | C20 | C21 | C22 | 1.4° | 179.7° |
C26 | C21 | C22 | C23 | 1.0° | 0.3° |
C26 | C21 | C22 | H22 | 179.1° | 179.8° |
C21 | C26 | C25 | C24 | 1.4° | 0.5° |
C21 | C26 | C25 | H26 | 180.0° | 179.8° |
C21 | C26 | C25 | H25 | 178.6° | 179.7° |
C21 | C22 | C23 | H22 | 180.0° | 180.0° |
C21 | C22 | C23 | C24 | 1.7° | 0.0° |
C21 | C22 | C23 | H23 | 178.3° | 180.0° |
C22 | C21 | C26 | C25 | 0.6° | 0.5° |
C22 | C21 | C26 | H26 | 179.4° | 179.7° |
C22 | C23 | C24 | H23 | 180.0° | 180.0° |
C22 | C23 | C24 | C25 | 0.8° | 0.0° |
C22 | C23 | C24 | H24 | 179.2° | 180.0° |
H22 | C22 | C23 | C24 | 178.3° | 180.0° |
H22 | C22 | C23 | H23 | 1.6° | 0.0° |
C23 | C24 | C25 | H24 | 180.0° | 180.0° |
C23 | C24 | C25 | C26 | 0.7° | 0.2° |
C23 | C24 | C25 | H25 | 179.3° | 180.0° |
H23 | C23 | C24 | C25 | 179.2° | 180.0° |
H23 | C23 | C24 | H24 | 0.8° | 0.0° |
C24 | C25 | C26 | H25 | 180.0° | 179.8° |
C24 | C25 | C26 | H26 | 178.6° | 179.7° |
H24 | C24 | C25 | C26 | 179.3° | 179.8° |
H24 | C24 | C25 | H25 | 0.7° | 0.0° |
H25 | C25 | C26 | H26 | 1.4° | 0.1° |