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VN1

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1C2sing1.53Å1.56Å
C21C2sing1.53Å1.53Å
C21C22sing1.53Å1.52Å
C2C3sing1.53Å1.57Å
N9N8doub1.29Å1.29ÅAromatic
N9C15sing1.34Å1.39ÅAromatic
C14O2sing1.43Å1.41Å
N8N6sing1.29Å1.39ÅAromatic
C4N1sing1.35Å1.39ÅAromatic
C4C5doub1.35Å1.39ÅAromatic
O2C13sing1.36Å1.38Å
C15C3sing1.51Å1.50Å
C15C16doub1.35Å1.41ÅAromatic
C3N1sing1.46Å1.46Å
C6O1sing1.43Å1.43Å
C6C5sing1.51Å1.49Å
C13C12doub1.38Å1.39ÅAromatic
C13C7sing1.39Å1.40ÅAromatic
C12C10sing1.40Å1.40ÅAromatic
O1C7sing1.36Å1.37Å
C7C8doub1.39Å1.41ÅAromatic
N3C11doub1.30Å1.39Å
N1N5sing1.29Å1.39ÅAromatic
N6C16sing1.35Å1.41ÅAromatic
N6C17sing1.47Å1.52Å
C10C11sing1.48Å1.47Å
C10C9doub1.39Å1.41ÅAromatic
C5N4sing1.34Å1.42ÅAromatic
C11N2sing1.38Å1.38Å
C8C9sing1.38Å1.39ÅAromatic
C17C18sing1.53Å1.54Å
N5N4doub1.29Å1.26ÅAromatic
C18C19sing1.53Å1.53Å
C19C20sing1.53Å1.53Å
C20N7sing1.47Å1.58Å
C1H1sing1.09Å1.10Å
C1H2sing1.09Å1.10Å
C1H3sing1.09Å1.10Å
C12H4sing1.08Å1.08Å
C14H5sing1.09Å1.10Å
C14H6sing1.09Å1.10Å
C14H7sing1.09Å1.10Å
C16H8sing1.08Å1.08Å
C17H9sing1.09Å1.10Å
C17H10sing1.09Å1.10Å
C18H11sing1.09Å1.10Å
C18H12sing1.09Å1.10Å
C19H13sing1.09Å1.10Å
C19H14sing1.09Å1.10Å
C2H15sing1.09Å1.10Å
C20H16sing1.09Å1.10Å
C20H17sing1.09Å1.10Å
C21H18sing1.09Å1.10Å
C21H19sing1.09Å1.10Å
C22H20sing1.09Å1.10Å
C22H21sing1.09Å1.10Å
C22H22sing1.09Å1.10Å
C3H23sing1.09Å1.10Å
C4H24sing1.08Å1.08Å
C6H25sing1.09Å1.10Å
C6H26sing1.09Å1.10Å
C8H27sing1.08Å1.08Å
C9H28sing1.08Å1.08Å
N2H29sing0.97Å1.00Å
N2H30sing0.97Å1.00Å
N3H31sing0.97Å1.00Å
N7H32sing1.01Å1.00Å
N7H33sing1.01Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C1C2C21108.6°109.4°
C1C2C3112.5°109.5°
C2C1H1109.5°109.5°
C2C1H2109.5°109.5°
C2C1H3109.4°109.5°
C1C2H15107.3°109.5°
C2C21C22114.1°109.5°
C21C2C3113.1°109.5°
C21C2H15107.7°109.5°
C2C21H18108.3°109.5°
C2C21H19108.3°109.4°
C22C21H18108.3°109.5°
C22C21H19108.3°109.5°
C21C22H20109.5°109.4°
C21C22H21109.4°109.5°
C21C22H22109.5°109.5°
C2C3C15114.4°109.4°
C2C3N1112.9°109.5°
C3C2H15107.3°109.5°
C2C3H23107.1°109.5°
N8N9C15111.7°108.8°
N9N8N6108.7°110.2°
N9C15C3125.3°126.7°
N9C15C16105.7°106.5°
C14O2C13117.9°117.0°
O2C14H5109.5°109.5°
O2C14H6109.5°109.4°
O2C14H7109.4°109.4°
N8N6C16107.8°108.3°
N8N6C17124.7°125.9°
N1C4C5105.3°106.2°
C4N1C3125.0°125.9°
C4N1N5108.8°108.2°
N1C4H24127.3°126.9°
C4C5C6125.3°126.8°
C4C5N4106.5°106.5°
C5C4H24127.3°126.9°
O2C13C12121.5°120.0°
O2C13C7116.4°120.0°
C3C15C16128.9°126.8°
C15C3N1106.0°109.5°
C15C3H23107.9°109.5°
C15C16N6106.1°106.2°
C15C16H8126.9°126.9°
C3N1N5126.1°125.9°
N1C3H23108.3°109.5°
O1C6C5107.5°109.5°
C6O1C7121.5°117.0°
O1C6H25110.0°109.4°
O1C6H26110.0°109.5°
C6C5N4128.2°126.7°
C5C6H25110.0°109.5°
C5C6H26110.0°109.5°
C12C13C7122.1°120.0°
C13C12C10121.9°119.8°
C13C12H4119.0°120.1°
C13C7O1119.5°119.9°
C13C7C8116.4°120.1°
C12C10C11119.8°120.0°
C12C10C9116.3°119.9°
C10C12H4119.1°120.1°
O1C7C8124.2°119.9°
C7C8C9121.5°120.1°
C7C8H27119.2°119.9°
N3C11C10122.5°120.0°
N3C11N2117.8°120.0°
C11N3H31112.0°120.0°
N1N5N4109.0°110.2°
C16N6C17127.5°125.9°
N6C16H8127.0°126.9°
N6C17C18112.3°109.4°
N6C17H9108.8°109.5°
N6C17H10108.8°109.5°
C11C10C9123.9°120.1°
C10C11N2119.7°120.0°
C10C9C8121.9°120.0°
C10C9H28119.1°119.9°
C5N4N5110.4°108.9°
C11N2H29120.0°120.0°
C11N2H30120.0°120.0°
C9C8H27119.3°119.9°
C8C9H28119.1°120.0°
C17C18C19113.6°109.5°
C18C17H9108.8°109.5°
C18C17H10108.8°109.5°
C17C18H11108.4°109.5°
C17C18H12108.4°109.5°
C18C19C20107.8°109.5°
C19C18H11108.4°109.4°
C19C18H12108.4°109.5°
C18C19H13109.9°109.5°
C18C19H14109.8°109.5°
C19C20N7114.2°109.5°
C20C19H13109.9°109.4°
C20C19H14109.9°109.5°
C19C20H16108.3°109.4°
C19C20H17108.3°109.5°
N7C20H16108.3°109.5°
N7C20H17108.3°109.5°
C20N7H32109.5°111.0°
C20N7H33109.5°110.9°
H1C1H2109.4°109.4°
H1C1H3109.5°109.4°
H2C1H3109.5°109.4°
H5C14H6109.5°109.5°
H5C14H7109.5°109.5°
H6C14H7109.5°109.5°
H9C17H10109.5°109.5°
H11C18H12109.5°109.5°
H13C19H14109.5°109.5°
H16C20H17109.5°109.5°
H18C21H19109.4°109.4°
H20C22H21109.5°109.5°
H20C22H22109.5°109.5°
H21C22H22109.5°109.5°
H25C6H26109.4°109.4°
H29N2H30120.0°120.0°
H32N7H33109.4°111.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C1C2C21C3125.7°120.0°
C1C2C21H15116.0°120.0°
C1C2C21C2276.7°65.0°
C1C2C3H15117.8°120.0°
C1C2C3C1571.0°60.0°
C1C2C3N1167.6°180.0°
C2C1H1H2120.0°120.0°
C2C1H1H3120.0°120.1°
C2C1H2H3120.0°120.1°
C1C2C21H18162.6°55.1°
C1C2C21H1944.0°175.0°
C1C2C3H2348.5°60.0°
C2C21C22H18120.7°120.1°
C2C21C22H19120.7°120.0°
C21C2C3H15118.6°120.0°
C21C2C3C15165.4°180.0°
C21C2C3N144.0°60.0°
C21C2C1H1180.0°180.0°
C21C2C1H260.0°60.0°
C21C2C1H360.0°60.0°
C2C21H18H19117.9°119.9°
C2C21C22H20180.0°60.0°
C2C21C22H2160.0°180.0°
C2C21C22H2260.0°59.9°
C21C2C3H2375.0°60.0°
C22C21C2C349.0°175.0°
C22C21C2H15167.3°54.9°
C22C21H18H19117.9°120.0°
C21C22H20H21120.0°120.0°
C21C22H20H22120.0°120.0°
C21C22H21H22120.0°120.1°
C2C3C15N940.9°144.0°
C2C3N1C450.4°84.2°
C2C3C15N1125.1°120.0°
C2C3C15H23119.1°120.0°
C2C3C15C16142.2°35.6°
C2C3N1H23118.4°120.0°
C2C3N1N5134.0°95.9°
C3C2C1H154.0°60.0°
C3C2C1H266.0°60.0°
C3C2C1H3174.0°180.0°
C3C2C21H1871.7°64.9°
C3C2C21H19169.6°55.0°
N8N9C15C3178.9°179.8°
N8N9C15C161.4°0.5°
N9N8N6C160.1°0.3°
N9N8N6C17179.8°179.7°
C15N9N8N60.8°0.5°
N9C15C3C16176.9°179.7°
N9C15C3N184.2°96.0°
N9C15C16N61.3°0.2°
N9C15C16H8178.6°179.6°
N9C15C3H23159.9°24.1°
C14O2C13C1228.1°0.0°
C14O2C13C7151.6°180.0°
O2C14H5H6120.0°120.0°
O2C14H5H7120.0°120.0°
O2C14H6H7120.0°120.0°
N8N6C16C150.9°0.0°
N8N6C16C17179.7°180.0°
N8N6C17C18100.1°55.0°
N8N6C16H8179.1°179.9°
N8N6C17H9139.5°174.9°
N8N6C17H1020.3°65.0°
N1C4C5H24180.0°179.6°
C4N1C3C1575.7°35.8°
C4N1C3N5175.6°179.9°
N1C4C5C6178.7°180.0°
N1C4C5N41.7°0.1°
C4N1N5N41.9°0.1°
C4N1C3H23168.7°155.8°
C5C4N1C3178.5°180.0°
C4C5C6O181.3°0.0°
C4C5C6N4176.3°180.0°
C5C4N1N52.2°0.1°
C4C5N4N50.6°0.0°
C4C5C6H25158.9°120.0°
C4C5C6H2638.4°120.0°
O2C13C12C7179.7°180.0°
O2C13C12C10179.6°180.0°
O2C13C7O10.5°0.1°
O2C13C7C8179.9°180.0°
O2C13C12H40.4°0.0°
C13O2C14H5180.0°180.0°
C13O2C14H660.0°60.0°
C13O2C14H760.0°60.0°
C15C3N1H23115.6°120.0°
C15C3N1N599.9°144.2°
C3C15C16N6178.7°180.0°
C3C15C16H81.3°0.1°
C15C3C2H1546.8°60.0°
C16C15C3N192.7°84.3°
C15C16N6H8180.0°179.9°
C15C16N6C17179.4°180.0°
C16C15C3H2323.2°155.6°
C3N1N5N4178.1°180.0°
N1C3C2H1574.6°60.0°
C3N1C4H241.5°0.3°
O1C6C5H25119.7°120.0°
O1C6C5H26119.7°120.0°
C6O1C7C13166.8°179.9°
C6O1C7C813.6°0.0°
O1C6C5N495.0°180.0°
O1C6H25H26120.9°119.9°
C5C6O1C7162.4°180.0°
C6C5N4N5177.5°180.0°
C6C5C4H241.3°0.3°
C5C6H25H26120.9°120.1°
C13C12C10H4180.0°180.0°
C12C13C7O1179.8°180.0°
C12C13C7C80.2°0.1°
C13C12C10C11179.1°180.0°
C13C12C10C90.4°0.3°
C7C13C12C100.0°0.1°
C13C7O1C8179.6°179.9°
C13C7C8C90.0°0.3°
C7C13C12H4180.0°179.9°
C13C7C8H27180.0°179.9°
C12C10C11N32.5°0.3°
C12C10C11C9178.6°179.7°
C12C10C11N2176.1°179.7°
C12C10C9C80.5°0.6°
C12C10C9H28179.5°179.8°
O1C7C8C9179.7°179.8°
C7O1C6H2542.7°60.0°
C7O1C6H2677.9°60.0°
O1C7C8H270.3°0.0°
C7C8C9C100.3°0.6°
C7C8C9H27180.0°179.7°
C7C8C9H28179.7°179.8°
N3C11C10N2178.6°180.0°
N3C11C10C9178.9°179.9°
N3C11N2H29178.7°180.0°
N3C11N2H301.3°0.0°
N1N5N4C50.8°0.0°
N5N1C3H2315.7°24.1°
N5N1C4H24177.8°179.7°
C16N6C17C1879.5°125.0°
C16N6C17H940.9°5.0°
C16N6C17H10160.0°115.0°
N6C17C18H9120.4°120.0°
N6C17C18H10120.4°120.0°
N6C17C18C19166.4°180.0°
C17N6C16H80.6°0.1°
N6C17H9H10118.7°120.0°
N6C17C18H1145.8°60.0°
N6C17C18H1273.0°60.0°
C11C10C9C8179.1°179.8°
C11C10C12H40.9°0.0°
C11C10C9H280.9°0.1°
C10C11N2H290.0°0.0°
C10C11N2H30180.0°180.0°
C10C11N3H31178.6°180.0°
C9C10C11N22.5°0.0°
C10C9C8H28180.0°179.6°
C9C10C12H4179.6°179.7°
C10C9C8H27179.7°179.7°
N4C5C4H24178.3°179.7°
N4C5C6H2524.8°60.0°
N4C5C6H26145.3°60.0°
C11N2H29H30180.0°180.0°
N2C11N3H310.0°0.0°
C17C18C19H11120.6°120.0°
C17C18C19H12120.6°120.1°
C17C18C19C20150.8°180.0°
C18C17H9H10118.7°120.0°
C17C18H11H12118.1°120.1°
C17C18C19H1389.4°60.0°
C17C18C19H1431.1°60.0°
C18C19C20H13119.7°120.0°
C18C19C20H14119.7°120.0°
C18C19C20N772.6°180.0°
C19C18C17H973.2°60.0°
C19C18C17H1046.0°60.0°
C19C18H11H12118.2°120.0°
C18C19H13H14120.7°120.0°
C18C19C20H16166.7°60.0°
C18C19C20H1748.1°60.0°
C19C20N7H16120.7°119.9°
C19C20N7H17120.7°120.0°
C20C19C18H1130.2°60.0°
C20C19C18H1288.6°59.9°
C20C19H13H14120.8°120.0°
C19C20H16H17117.8°120.0°
C19C20N7H32180.0°180.0°
C19C20N7H3360.0°56.0°
N7C20C19H1347.2°60.0°
N7C20C19H14167.7°60.0°
N7C20H16H17117.8°120.0°
C20N7H32H33120.0°123.9°
H1C1H2H3120.0°119.9°
H1C1C2H1563.8°60.0°
H2C1C2H15176.2°180.0°
H3C1C2H1556.2°60.0°
H5C14H6H7120.0°120.1°
H9C17C18H11166.2°59.9°
H9C17C18H1247.4°180.0°
H10C17C18H1174.6°180.0°
H10C17C18H12166.6°60.0°
H11C18C19H13150.0°180.0°
H11C18C19H1489.5°60.0°
H12C18C19H1331.1°60.0°
H12C18C19H14151.6°180.0°
H13C19C20H1673.5°180.0°
H13C19C20H17167.9°60.0°
H14C19C20H1647.0°60.0°
H14C19C20H1771.6°180.0°
H15C2C21H1846.6°175.0°
H15C2C21H1972.0°65.1°
H15C2C3H23166.3°180.0°
H16C20N7H3259.3°60.1°
H16C20N7H33179.3°176.0°
H17C20N7H3259.3°60.0°
H17C20N7H3360.7°64.0°
H18C21C22H2059.3°60.0°
H18C21C22H21179.3°59.9°
H18C21C22H2260.7°180.0°
H19C21C22H2059.3°180.0°
H19C21C22H2160.7°60.0°
H19C21C22H22179.3°60.0°
H20C22H21H22120.0°120.0°
H27C8C9H280.3°0.1°

224931

PDB entries from 2024-09-11

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