VM7
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| C7 | S | sing | 1.81Å | 1.75Å | |
| O2 | S | doub | 1.42Å | 1.44Å | |
| S | C6 | sing | 1.76Å | 1.77Å | |
| S | O1 | doub | 1.42Å | 1.44Å | |
| C8 | C6 | doub | 1.38Å | 1.38Å | Aromatic |
| C8 | C9 | sing | 1.38Å | 1.38Å | Aromatic |
| C6 | C5 | sing | 1.38Å | 1.39Å | Aromatic |
| C9 | C10 | doub | 1.38Å | 1.38Å | Aromatic |
| C5 | C4 | doub | 1.39Å | 1.40Å | Aromatic |
| C10 | C4 | sing | 1.39Å | 1.39Å | Aromatic |
| O | C | doub | 1.22Å | 1.25Å | |
| C4 | C3 | sing | 1.48Å | 1.49Å | |
| C2 | C3 | doub | 1.39Å | 1.39Å | Aromatic |
| C2 | C1 | sing | 1.39Å | 1.39Å | Aromatic |
| C3 | C11 | sing | 1.39Å | 1.39Å | Aromatic |
| C | C1 | sing | 1.48Å | 1.51Å | |
| C | O3 | sing | 1.35Å | 1.26Å | |
| C1 | C13 | doub | 1.40Å | 1.39Å | Aromatic |
| C11 | C12 | doub | 1.38Å | 1.38Å | Aromatic |
| C13 | C12 | sing | 1.38Å | 1.38Å | Aromatic |
| C10 | H7 | sing | 1.08Å | 1.08Å | |
| C11 | H8 | sing | 1.08Å | 1.08Å | |
| C12 | H9 | sing | 1.08Å | 1.08Å | |
| C13 | H10 | sing | 1.08Å | 1.08Å | |
| C2 | H | sing | 1.08Å | 1.08Å | |
| C5 | H1 | sing | 1.08Å | 1.08Å | |
| C7 | H3 | sing | 1.09Å | 1.10Å | |
| C7 | H4 | sing | 1.09Å | 1.10Å | |
| C7 | H2 | sing | 1.09Å | 1.10Å | |
| C8 | H5 | sing | 1.08Å | 1.08Å | |
| C9 | H6 | sing | 1.08Å | 1.08Å | |
| O3 | H11 | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| C7 | S | O2 | 108.5° | 110.5° |
| C7 | S | C6 | 104.4° | 104.4° |
| C7 | S | O1 | 108.6° | 110.6° |
| S | C7 | H3 | 109.5° | 109.5° |
| S | C7 | H4 | 109.5° | 109.5° |
| S | C7 | H2 | 109.5° | 109.5° |
| O2 | S | C6 | 108.2° | 104.2° |
| O2 | S | O1 | 118.0° | 121.1° |
| C6 | S | O1 | 108.3° | 104.3° |
| S | C6 | C8 | 119.6° | 119.9° |
| S | C6 | C5 | 119.2° | 120.0° |
| C6 | C8 | C9 | 119.0° | 120.2° |
| C8 | C6 | C5 | 121.2° | 120.2° |
| C6 | C8 | H5 | 120.5° | 119.9° |
| C8 | C9 | C10 | 120.4° | 120.2° |
| C9 | C8 | H5 | 120.5° | 119.9° |
| C8 | C9 | H6 | 119.8° | 120.0° |
| C6 | C5 | C4 | 119.9° | 119.9° |
| C6 | C5 | H1 | 120.1° | 120.0° |
| C9 | C10 | C4 | 120.9° | 119.8° |
| C9 | C10 | H7 | 119.5° | 120.1° |
| C10 | C9 | H6 | 119.8° | 119.9° |
| C5 | C4 | C10 | 118.6° | 119.8° |
| C5 | C4 | C3 | 120.4° | 120.1° |
| C4 | C5 | H1 | 120.0° | 120.1° |
| C10 | C4 | C3 | 120.9° | 120.1° |
| C4 | C10 | H7 | 119.5° | 120.1° |
| O | C | C1 | 117.3° | 120.0° |
| O | C | O3 | 124.6° | 119.9° |
| C4 | C3 | C2 | 120.7° | 120.1° |
| C4 | C3 | C11 | 121.1° | 120.0° |
| C3 | C2 | C1 | 121.4° | 119.8° |
| C2 | C3 | C11 | 118.2° | 119.9° |
| C3 | C2 | H | 119.3° | 120.2° |
| C2 | C1 | C | 120.1° | 120.1° |
| C2 | C1 | C13 | 119.2° | 119.8° |
| C1 | C2 | H | 119.3° | 120.1° |
| C3 | C11 | C12 | 120.9° | 120.2° |
| C3 | C11 | H8 | 119.5° | 120.0° |
| C1 | C | O3 | 118.0° | 120.1° |
| C | C1 | C13 | 120.8° | 120.1° |
| C | O3 | H11 | 109.5° | 117.1° |
| C1 | C13 | C12 | 120.2° | 120.1° |
| C1 | C13 | H10 | 119.9° | 120.0° |
| C11 | C12 | C13 | 120.2° | 120.2° |
| C12 | C11 | H8 | 119.6° | 119.8° |
| C11 | C12 | H9 | 119.9° | 119.9° |
| C13 | C12 | H9 | 119.9° | 119.9° |
| C12 | C13 | H10 | 119.9° | 120.0° |
| H3 | C7 | H4 | 109.5° | 109.4° |
| H3 | C7 | H2 | 109.5° | 109.5° |
| H4 | C7 | H2 | 109.5° | 109.5° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| C7 | S | O2 | C6 | 112.7° | 111.7° |
| C7 | S | O2 | O1 | 124.1° | 131.6° |
| C7 | S | C6 | O1 | 115.6° | 116.1° |
| C7 | S | C6 | C8 | 38.2° | 90.1° |
| C7 | S | C6 | C5 | 143.9° | 90.0° |
| S | C7 | H3 | H4 | 120.0° | 120.0° |
| S | C7 | H3 | H2 | 120.0° | 120.0° |
| S | C7 | H4 | H2 | 120.0° | 120.0° |
| O2 | S | C6 | O1 | 129.0° | 127.9° |
| O2 | S | C6 | C8 | 153.6° | 153.9° |
| O2 | S | C6 | C5 | 28.5° | 26.0° |
| O2 | S | C7 | H3 | 180.0° | 51.6° |
| O2 | S | C7 | H4 | 60.0° | 171.6° |
| O2 | S | C7 | H2 | 60.0° | 68.4° |
| S | C6 | C8 | C5 | 177.9° | 179.9° |
| S | C6 | C8 | C9 | 177.3° | 179.8° |
| S | C6 | C5 | C4 | 176.0° | 180.0° |
| S | C6 | C5 | H1 | 4.0° | 0.1° |
| C6 | S | C7 | H3 | 64.8° | 59.9° |
| C6 | S | C7 | H4 | 175.2° | 60.0° |
| C6 | S | C7 | H2 | 55.2° | 180.0° |
| S | C6 | C8 | H5 | 2.7° | 0.0° |
| O1 | S | C6 | C8 | 77.4° | 26.0° |
| O1 | S | C6 | C5 | 100.5° | 153.9° |
| O1 | S | C7 | H3 | 50.5° | 171.6° |
| O1 | S | C7 | H4 | 69.5° | 51.6° |
| O1 | S | C7 | H2 | 170.5° | 68.4° |
| C6 | C8 | C9 | H5 | 180.0° | 179.7° |
| C6 | C8 | C9 | C10 | 0.4° | 0.5° |
| C8 | C6 | C5 | C4 | 1.9° | 0.0° |
| C8 | C6 | C5 | H1 | 178.1° | 180.0° |
| C6 | C8 | C9 | H6 | 179.6° | 180.0° |
| C9 | C8 | C6 | C5 | 0.6° | 0.3° |
| C8 | C9 | C10 | H6 | 180.0° | 179.5° |
| C8 | C9 | C10 | C4 | 0.0° | 0.5° |
| C8 | C9 | C10 | H7 | 180.0° | 179.8° |
| C6 | C5 | C4 | H1 | 180.0° | 180.0° |
| C6 | C5 | C4 | C10 | 2.1° | 0.0° |
| C6 | C5 | C4 | C3 | 173.5° | 180.0° |
| C5 | C6 | C8 | H5 | 179.4° | 180.0° |
| C9 | C10 | C4 | C5 | 1.2° | 0.3° |
| C9 | C10 | C4 | H7 | 180.0° | 179.7° |
| C9 | C10 | C4 | C3 | 174.5° | 179.7° |
| C10 | C9 | C8 | H5 | 179.7° | 179.7° |
| C5 | C4 | C10 | C3 | 175.7° | 180.0° |
| C5 | C4 | C3 | C2 | 127.4° | 180.0° |
| C5 | C4 | C3 | C11 | 56.0° | 0.0° |
| C5 | C4 | C10 | H7 | 178.8° | 180.0° |
| C10 | C4 | C3 | C2 | 57.0° | 0.0° |
| C10 | C4 | C3 | C11 | 119.6° | 180.0° |
| C10 | C4 | C5 | H1 | 177.9° | 180.0° |
| C4 | C10 | C9 | H6 | 180.0° | 180.0° |
| O | C | C1 | C2 | 2.0° | 0.6° |
| O | C | C1 | O3 | 179.0° | 179.7° |
| O | C | C1 | C13 | 178.3° | 179.7° |
| O | C | O3 | H11 | 0.0° | 0.3° |
| C4 | C3 | C2 | C11 | 176.7° | 180.0° |
| C4 | C3 | C2 | C1 | 175.7° | 180.0° |
| C4 | C3 | C11 | C12 | 175.5° | 179.7° |
| C3 | C4 | C10 | H7 | 5.6° | 0.0° |
| C4 | C3 | C11 | H8 | 4.4° | 0.1° |
| C4 | C3 | C2 | H | 4.3° | 0.1° |
| C3 | C4 | C5 | H1 | 6.4° | 0.0° |
| C3 | C2 | C1 | H | 180.0° | 180.0° |
| C3 | C2 | C1 | C | 179.5° | 180.0° |
| C3 | C2 | C1 | C13 | 0.2° | 0.3° |
| C2 | C3 | C11 | C12 | 1.1° | 0.3° |
| C2 | C3 | C11 | H8 | 178.9° | 180.0° |
| C1 | C2 | C3 | C11 | 1.0° | 0.0° |
| C2 | C1 | C | C13 | 179.7° | 179.7° |
| C2 | C1 | C | O3 | 179.0° | 179.7° |
| C2 | C1 | C13 | C12 | 0.5° | 0.3° |
| C2 | C1 | C13 | H10 | 179.5° | 179.8° |
| C3 | C11 | C12 | H8 | 180.0° | 179.7° |
| C3 | C11 | C12 | C13 | 0.5° | 0.3° |
| C3 | C11 | C12 | H9 | 179.5° | 179.7° |
| C11 | C3 | C2 | H | 179.0° | 180.0° |
| C | C1 | C13 | C12 | 179.8° | 180.0° |
| C | C1 | C13 | H10 | 0.2° | 0.1° |
| C | C1 | C2 | H | 0.5° | 0.0° |
| C1 | C | O3 | H11 | 178.9° | 180.0° |
| O3 | C | C1 | C13 | 0.7° | 0.0° |
| C1 | C13 | C12 | C11 | 0.4° | 0.0° |
| C1 | C13 | C12 | H10 | 180.0° | 179.9° |
| C1 | C13 | C12 | H9 | 179.7° | 180.0° |
| C13 | C1 | C2 | H | 179.8° | 179.7° |
| C11 | C12 | C13 | H9 | 180.0° | 180.0° |
| C11 | C12 | C13 | H10 | 179.7° | 179.9° |
| C13 | C12 | C11 | H8 | 179.5° | 180.0° |
| H7 | C10 | C9 | H6 | 0.0° | 0.3° |
| H8 | C11 | C12 | H9 | 0.5° | 0.0° |
| H9 | C12 | C13 | H10 | 0.3° | 0.1° |
| H3 | C7 | H4 | H2 | 120.0° | 120.0° |
| H5 | C8 | C9 | H6 | 0.3° | 0.3° |
