VLM
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| N | CA | sing | 1.47Å | 1.48Å | |
| N | H | sing | 1.01Å | 1.00Å | |
| N | H2 | sing | 1.01Å | 1.00Å | |
| CA | C | sing | 1.51Å | 1.52Å | |
| CA | CB | sing | 1.53Å | 1.54Å | |
| CA | HA | sing | 1.09Å | 1.10Å | |
| C | O | doub | 1.21Å | 1.22Å | |
| C | NT | sing | 1.35Å | 1.25Å | |
| CB | CG1 | sing | 1.53Å | 1.52Å | |
| CB | CG2 | sing | 1.53Å | 1.52Å | |
| CB | HB | sing | 1.09Å | 1.10Å | |
| CG1 | HG11 | sing | 1.09Å | 1.10Å | |
| CG1 | HG12 | sing | 1.09Å | 1.10Å | |
| CG1 | HG13 | sing | 1.09Å | 1.10Å | |
| CG2 | HG21 | sing | 1.09Å | 1.10Å | |
| CG2 | HG22 | sing | 1.09Å | 1.10Å | |
| CG2 | HG23 | sing | 1.09Å | 1.10Å | |
| NT | HNT1 | sing | 0.97Å | 1.00Å | |
| NT | HNT2 | sing | 0.97Å | 1.00Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| CA | N | H | 109.5° | 111.0° |
| CA | N | H2 | 109.4° | 111.0° |
| N | CA | C | 110.0° | 109.5° |
| N | CA | CB | 109.8° | 109.5° |
| N | CA | HA | 108.9° | 109.5° |
| H | N | H2 | 109.5° | 111.0° |
| C | CA | CB | 109.7° | 109.4° |
| C | CA | HA | 109.0° | 109.5° |
| CA | C | O | 120.4° | 120.0° |
| CA | C | NT | 116.9° | 120.0° |
| CB | CA | HA | 109.3° | 109.5° |
| CA | CB | CG1 | 110.7° | 109.5° |
| CA | CB | CG2 | 109.1° | 109.4° |
| CA | CB | HB | 109.3° | 109.5° |
| O | C | NT | 122.8° | 120.0° |
| C | NT | HNT1 | 109.8° | 120.0° |
| C | NT | HNT2 | 125.2° | 120.0° |
| CG1 | CB | CG2 | 110.7° | 109.4° |
| CG1 | CB | HB | 107.6° | 109.5° |
| CB | CG1 | HG11 | 109.5° | 109.5° |
| CB | CG1 | HG12 | 109.5° | 109.4° |
| CB | CG1 | HG13 | 109.4° | 109.5° |
| CG2 | CB | HB | 109.3° | 109.5° |
| CB | CG2 | HG21 | 109.5° | 109.4° |
| CB | CG2 | HG22 | 109.5° | 109.5° |
| CB | CG2 | HG23 | 109.4° | 109.5° |
| HG11 | CG1 | HG12 | 109.5° | 109.4° |
| HG11 | CG1 | HG13 | 109.5° | 109.5° |
| HG12 | CG1 | HG13 | 109.5° | 109.5° |
| HG21 | CG2 | HG22 | 109.5° | 109.4° |
| HG21 | CG2 | HG23 | 109.4° | 109.5° |
| HG22 | CG2 | HG23 | 109.5° | 109.5° |
| HNT1 | NT | HNT2 | 125.1° | 120.0° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| CA | N | H | H2 | 120.0° | 124.0° |
| N | CA | C | CB | 120.9° | 120.0° |
| N | CA | C | HA | 119.4° | 120.0° |
| N | CA | CB | HA | 119.4° | 120.0° |
| N | CA | C | O | 54.5° | 19.9° |
| N | CA | C | NT | 126.1° | 160.1° |
| N | CA | CB | CG1 | 171.8° | 180.0° |
| N | CA | CB | CG2 | 66.1° | 60.0° |
| N | CA | CB | HB | 53.3° | 60.0° |
| H | N | CA | C | 68.3° | 60.0° |
| H | N | CA | CB | 170.8° | 60.0° |
| H | N | CA | HA | 51.2° | 180.0° |
| H2 | N | CA | C | 51.7° | 176.0° |
| H2 | N | CA | CB | 69.2° | 64.0° |
| H2 | N | CA | HA | 171.1° | 56.0° |
| C | CA | CB | HA | 119.5° | 120.0° |
| CA | C | O | NT | 179.4° | 180.0° |
| C | CA | CB | CG1 | 50.7° | 60.0° |
| C | CA | CB | CG2 | 172.9° | 180.0° |
| C | CA | CB | HB | 67.7° | 60.0° |
| CA | C | NT | HNT1 | 0.3° | 0.1° |
| CA | C | NT | HNT2 | 179.7° | 180.0° |
| CB | CA | C | O | 66.4° | 100.0° |
| CB | CA | C | NT | 113.0° | 80.0° |
| CA | CB | CG1 | CG2 | 121.2° | 120.0° |
| CA | CB | CG1 | HB | 119.4° | 120.1° |
| CA | CB | CG2 | HB | 119.5° | 120.0° |
| CA | CB | CG1 | HG11 | 167.7° | 180.0° |
| CA | CB | CG1 | HG12 | 47.7° | 60.1° |
| CA | CB | CG1 | HG13 | 72.3° | 59.9° |
| CA | CB | CG2 | HG21 | 94.1° | 60.0° |
| CA | CB | CG2 | HG22 | 145.9° | 179.9° |
| CA | CB | CG2 | HG23 | 25.9° | 60.0° |
| HA | CA | C | O | 174.0° | 140.0° |
| HA | CA | C | NT | 6.6° | 40.0° |
| HA | CA | CB | CG1 | 68.8° | 60.0° |
| HA | CA | CB | CG2 | 53.4° | 60.0° |
| HA | CA | CB | HB | 172.8° | 180.0° |
| O | C | NT | HNT1 | 179.7° | 179.9° |
| O | C | NT | HNT2 | 0.4° | 0.0° |
| C | NT | HNT1 | HNT2 | 180.0° | 179.9° |
| CG1 | CB | CG2 | HB | 118.4° | 120.0° |
| CB | CG1 | HG11 | HG12 | 120.0° | 119.9° |
| CB | CG1 | HG11 | HG13 | 120.0° | 120.1° |
| CB | CG1 | HG12 | HG13 | 120.0° | 120.0° |
| CG1 | CB | CG2 | HG21 | 143.8° | 180.0° |
| CG1 | CB | CG2 | HG22 | 23.8° | 60.1° |
| CG1 | CB | CG2 | HG23 | 96.3° | 60.0° |
| CG2 | CB | CG1 | HG11 | 71.1° | 60.1° |
| CG2 | CB | CG1 | HG12 | 168.9° | 180.0° |
| CG2 | CB | CG1 | HG13 | 48.9° | 60.0° |
| CB | CG2 | HG21 | HG22 | 120.0° | 119.9° |
| CB | CG2 | HG21 | HG23 | 119.9° | 120.0° |
| CB | CG2 | HG22 | HG23 | 120.0° | 120.0° |
| HB | CB | CG1 | HG11 | 48.2° | 59.9° |
| HB | CB | CG1 | HG12 | 71.8° | 60.0° |
| HB | CB | CG1 | HG13 | 168.2° | 180.0° |
| HB | CB | CG2 | HG21 | 25.4° | 60.0° |
| HB | CB | CG2 | HG22 | 94.6° | 59.9° |
| HB | CB | CG2 | HG23 | 145.3° | 180.0° |
| HG11 | CG1 | HG12 | HG13 | 120.0° | 120.0° |
| HG21 | CG2 | HG22 | HG23 | 120.0° | 120.1° |
