VLL
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| N | CA | sing | 1.47Å | 1.46Å | |
| N | H | sing | 1.01Å | 1.00Å | |
| N | H2 | sing | 1.01Å | 1.00Å | |
| CA | CB | sing | 1.53Å | 1.53Å | |
| CA | C | sing | 1.51Å | 1.53Å | |
| CA | HA | sing | 1.09Å | 1.10Å | |
| CB | CG1 | sing | 1.53Å | 1.54Å | |
| CB | NG2 | sing | 1.47Å | 1.49Å | |
| CB | HB | sing | 1.09Å | 1.10Å | |
| CG1 | HG11 | sing | 1.09Å | 1.10Å | |
| CG1 | HG12 | sing | 1.09Å | 1.10Å | |
| CG1 | HG13 | sing | 1.09Å | 1.10Å | |
| C | OXT | sing | 1.34Å | 1.34Å | |
| C | O | doub | 1.21Å | 1.22Å | |
| OXT | HXT | sing | 0.97Å | 0.95Å | |
| NG2 | HG21 | sing | 1.01Å | 1.00Å | |
| NG2 | HG22 | sing | 1.01Å | 1.00Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| CA | N | H | 109.5° | 111.0° |
| CA | N | H2 | 109.4° | 111.0° |
| N | CA | CB | 110.5° | 109.5° |
| N | CA | C | 109.0° | 109.5° |
| N | CA | HA | 110.1° | 109.4° |
| H | N | H2 | 109.5° | 110.9° |
| CB | CA | C | 112.4° | 109.4° |
| CB | CA | HA | 106.6° | 109.5° |
| CA | CB | CG1 | 108.9° | 109.5° |
| CA | CB | NG2 | 111.7° | 109.4° |
| CA | CB | HB | 108.6° | 109.5° |
| C | CA | HA | 108.1° | 109.5° |
| CA | C | OXT | 117.1° | 120.0° |
| CA | C | O | 119.8° | 120.0° |
| CG1 | CB | NG2 | 110.5° | 109.5° |
| CG1 | CB | HB | 109.9° | 109.5° |
| CB | CG1 | HG11 | 109.5° | 109.4° |
| CB | CG1 | HG12 | 109.4° | 109.4° |
| CB | CG1 | HG13 | 109.5° | 109.4° |
| NG2 | CB | HB | 107.1° | 109.5° |
| CB | NG2 | HG21 | 109.5° | 111.0° |
| CB | NG2 | HG22 | 109.4° | 111.0° |
| HG11 | CG1 | HG12 | 109.5° | 109.5° |
| HG11 | CG1 | HG13 | 109.5° | 109.5° |
| HG12 | CG1 | HG13 | 109.5° | 109.5° |
| OXT | C | O | 123.1° | 120.0° |
| C | OXT | HXT | 109.5° | 117.0° |
| HG21 | NG2 | HG22 | 109.5° | 111.0° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| CA | N | H | H2 | 120.0° | 123.9° |
| N | CA | CB | C | 122.1° | 120.0° |
| N | CA | CB | HA | 119.6° | 120.0° |
| N | CA | C | HA | 119.7° | 120.0° |
| N | CA | CB | CG1 | 57.1° | 175.0° |
| N | CA | CB | NG2 | 65.2° | 55.0° |
| N | CA | CB | HB | 176.9° | 65.0° |
| N | CA | C | OXT | 160.6° | 159.9° |
| N | CA | C | O | 18.7° | 20.0° |
| H | N | CA | CB | 180.0° | 176.1° |
| H | N | CA | C | 56.0° | 63.9° |
| H | N | CA | HA | 62.5° | 56.1° |
| H2 | N | CA | CB | 60.0° | 60.0° |
| H2 | N | CA | C | 64.0° | 60.0° |
| H2 | N | CA | HA | 177.5° | 180.0° |
| CB | CA | C | HA | 117.4° | 120.0° |
| CA | CB | CG1 | NG2 | 123.1° | 119.9° |
| CA | CB | CG1 | HB | 119.0° | 120.0° |
| CA | CB | NG2 | HB | 118.8° | 120.0° |
| CA | CB | CG1 | HG11 | 180.0° | 179.9° |
| CA | CB | CG1 | HG12 | 60.0° | 60.0° |
| CA | CB | CG1 | HG13 | 60.0° | 60.0° |
| CB | CA | C | OXT | 76.5° | 80.0° |
| CB | CA | C | O | 104.2° | 100.0° |
| CA | CB | NG2 | HG21 | 180.0° | 56.1° |
| CA | CB | NG2 | HG22 | 60.0° | 180.0° |
| C | CA | CB | CG1 | 179.2° | 65.0° |
| C | CA | CB | NG2 | 56.9° | 175.0° |
| C | CA | CB | HB | 61.0° | 55.0° |
| CA | C | OXT | O | 179.3° | 179.9° |
| CA | C | OXT | HXT | 179.3° | 180.0° |
| HA | CA | CB | CG1 | 62.5° | 55.0° |
| HA | CA | CB | NG2 | 175.2° | 65.0° |
| HA | CA | CB | HB | 57.3° | 175.1° |
| HA | CA | C | OXT | 40.9° | 40.0° |
| HA | CA | C | O | 138.4° | 140.0° |
| CG1 | CB | NG2 | HB | 119.7° | 120.0° |
| CB | CG1 | HG11 | HG12 | 120.0° | 120.0° |
| CB | CG1 | HG11 | HG13 | 120.0° | 119.9° |
| CB | CG1 | HG12 | HG13 | 120.0° | 120.0° |
| CG1 | CB | NG2 | HG21 | 58.5° | 176.0° |
| CG1 | CB | NG2 | HG22 | 61.5° | 60.0° |
| NG2 | CB | CG1 | HG11 | 56.9° | 60.0° |
| NG2 | CB | CG1 | HG12 | 176.9° | 180.0° |
| NG2 | CB | CG1 | HG13 | 63.1° | 60.0° |
| CB | NG2 | HG21 | HG22 | 120.0° | 123.9° |
| HB | CB | CG1 | HG11 | 61.0° | 60.0° |
| HB | CB | CG1 | HG12 | 59.0° | 60.0° |
| HB | CB | CG1 | HG13 | 178.9° | 180.0° |
| HB | CB | NG2 | HG21 | 61.2° | 63.9° |
| HB | CB | NG2 | HG22 | 178.8° | 60.0° |
| HG11 | CG1 | HG12 | HG13 | 120.0° | 120.1° |
| O | C | OXT | HXT | 0.0° | 0.1° |
