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VL5

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N28C27sing1.38Å1.44Å
C27S29sing1.76Å1.72ÅAromatic
C27N26doub1.30Å1.34ÅAromatic
S29C30sing1.76Å1.74ÅAromatic
N26C25sing1.33Å1.38ÅAromatic
C30C25doub1.35Å1.41ÅAromatic
C25C24sing1.48Å1.49Å
O21C19doub1.21Å1.25Å
C24N23doub1.30Å1.26Å
C24C31sing1.48Å1.46Å
N23O22sing1.42Å1.27Å
O20C19sing1.34Å1.25Å
C19C18sing1.51Å1.50Å
O32C31doub1.22Å1.23Å
C31N33sing1.35Å1.33Å
O22C18sing1.43Å1.43Å
C18C17sing1.53Å1.52Å
N33C34sing1.46Å1.45Å
C34C39sing1.51Å1.50Å
C34C35sing1.53Å1.54Å
O40C39doub1.21Å1.23Å
C17O16sing1.43Å1.43Å
C37C35sing1.53Å1.53Å
O16C13sing1.36Å1.37Å
C35C36sing1.53Å1.53Å
C35N38sing1.47Å1.49Å
N38O41sing1.46Å1.36Å
C13C12doub1.39Å1.39ÅAromatic
C13C14sing1.39Å1.39ÅAromatic
O41S42sing1.52Å1.54Å
C12C11sing1.38Å1.39ÅAromatic
C14C15doub1.38Å1.39ÅAromatic
C11C10doub1.40Å1.39ÅAromatic
S42O44doub1.42Å1.47Å
S42O45doub1.42Å1.47Å
S42O43sing1.52Å1.48Å
C15C10sing1.40Å1.39ÅAromatic
C10C8sing1.48Å1.50Å
C2N1sing1.47Å1.47Å
C2C3sing1.53Å1.53Å
C6N1sing1.47Å1.47Å
C6C5sing1.53Å1.52Å
C8N7sing1.38Å1.34Å
C8N9doub1.30Å1.27Å
N7C3sing1.46Å1.46Å
C3C4sing1.53Å1.53Å
C4C5sing1.53Å1.52Å
C11H1sing1.08Å1.08Å
C12H2sing1.08Å1.08Å
C14H3sing1.08Å1.08Å
C15H4sing1.08Å1.08Å
C17H5sing1.09Å1.10Å
C17H6sing1.09Å1.10Å
C18H7sing1.09Å1.10Å
C2H8sing1.09Å1.10Å
C2H9sing1.09Å1.10Å
C3H10sing1.09Å1.10Å
C30H11sing1.08Å1.08Å
C34H12sing1.09Å1.10Å
C36H13sing1.09Å1.10Å
C36H14sing1.09Å1.10Å
C36H15sing1.09Å1.10Å
C37H16sing1.09Å1.10Å
C37H17sing1.09Å1.10Å
C37H18sing1.09Å1.10Å
C39H19sing1.08Å1.08Å
C4H20sing1.09Å1.10Å
C4H21sing1.09Å1.10Å
C5H22sing1.09Å1.10Å
C5H23sing1.09Å1.10Å
C6H24sing1.09Å1.10Å
C6H25sing1.09Å1.10Å
N1H26sing1.01Å1.00Å
N28H27sing0.97Å1.00Å
N28H28sing0.97Å1.00Å
N33H29sing0.97Å1.00Å
N38H30sing1.01Å1.00Å
N7H31sing0.97Å1.00Å
N9H32sing0.97Å1.00Å
O20H33sing0.97Å0.95Å
O43H34sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
N28C27S29124.2°125.2°
N28C27N26122.3°125.3°
C27N28H27109.5°120.0°
C27N28H28109.5°120.0°
S29C27N26113.5°109.5°
C27S29C3091.4°90.1°
C27N26C25111.8°116.9°
S29C30C25107.8°108.3°
S29C30H11126.1°125.9°
N26C25C30115.4°115.2°
N26C25C24120.9°122.4°
C30C25C24123.7°122.4°
C25C30H11126.1°125.8°
C25C24N23120.6°120.0°
C25C24C31122.3°120.0°
O21C19O20123.3°120.0°
O21C19C18118.3°120.0°
N23C24C31117.0°120.0°
C24N23O22119.8°120.0°
C24C31O32121.2°120.0°
C24C31N33116.4°120.0°
N23O22C18118.7°114.0°
O20C19C18118.4°120.0°
C19O20H33109.5°117.0°
C19C18O22108.1°109.5°
C19C18C17109.1°109.5°
C19C18H7109.5°109.4°
O32C31N33122.4°120.0°
C31N33C34122.3°120.0°
C31N33H29118.9°120.0°
O22C18C17110.5°109.5°
O22C18H7110.5°109.5°
C18C17O16108.2°109.4°
C18C17H5109.8°109.4°
C18C17H6109.8°109.4°
C17C18H7109.2°109.5°
N33C34C39107.4°109.5°
N33C34C35115.2°109.5°
N33C34H12108.1°109.5°
C34N33H29118.8°120.0°
C39C34C35111.3°109.4°
C34C39O40121.2°120.0°
C39C34H12107.6°109.4°
C34C39H19119.4°120.0°
C34C35C37107.7°109.5°
C34C35C36110.2°109.4°
C34C35N38114.6°109.5°
C35C34H12107.0°109.5°
O40C39H19119.4°120.0°
C17O16C13119.8°117.0°
O16C17H5109.8°109.5°
O16C17H6109.8°109.5°
C37C35C36111.0°109.5°
C37C35N38104.7°109.5°
C35C37H16109.5°109.4°
C35C37H17109.5°109.5°
C35C37H18109.5°109.5°
O16C13C12119.5°120.0°
O16C13C14120.1°119.9°
C36C35N38108.6°109.5°
C35C36H13109.5°109.5°
C35C36H14109.4°109.5°
C35C36H15109.5°109.5°
C35N38O41114.3°111.0°
C35N38H30108.2°111.0°
N38O41S42123.0°114.0°
O41N38H30108.2°111.0°
C12C13C14120.3°120.1°
C13C12C11119.4°120.1°
C13C12H2120.3°119.9°
C13C14C15120.2°120.1°
C13C14H3119.9°119.9°
O41S42O44109.2°106.4°
O41S42O45108.7°106.4°
O41S42O43109.2°107.2°
C12C11C10120.4°119.9°
C12C11H1119.8°120.0°
C11C12H2120.3°120.0°
C14C15C10119.7°120.0°
C15C14H3119.9°120.0°
C14C15H4120.1°120.0°
C11C10C15119.9°119.8°
C11C10C8120.5°120.0°
C10C11H1119.8°120.1°
O44S42O45107.0°123.1°
O44S42O43111.7°106.4°
O45S42O43111.0°106.4°
S42O43H34109.5°114.0°
C15C10C8119.5°120.1°
C10C15H4120.2°120.0°
C10C8N7120.6°120.0°
C10C8N9118.9°120.0°
N1C2C3111.8°109.6°
C2N1C6110.4°111.2°
N1C2H8108.9°109.5°
N1C2H9108.9°109.5°
C2N1H26109.3°111.0°
C2C3N7110.3°109.5°
C2C3C4110.6°109.3°
C3C2H8108.9°109.4°
C3C2H9108.9°109.4°
C2C3H10107.9°109.5°
N1C6C5109.8°109.5°
N1C6H24109.4°109.5°
N1C6H25109.4°109.5°
C6N1H26109.2°111.0°
C6C5C4109.7°109.3°
C6C5H22109.4°109.6°
C6C5H23109.4°109.5°
C5C6H24109.4°109.4°
C5C6H25109.4°109.4°
N7C8N9120.4°120.0°
C8N7C3123.3°120.0°
C8N7H31118.3°120.0°
C8N9H32112.0°120.0°
N7C3C4111.0°109.5°
N7C3H10108.9°109.6°
C3N7H31118.4°120.0°
C3C4C5110.6°109.1°
C4C3H10108.0°109.5°
C3C4H20109.2°109.5°
C3C4H21109.2°109.5°
C5C4H20109.2°109.5°
C5C4H21109.2°109.5°
C4C5H22109.4°109.5°
C4C5H23109.4°109.5°
H5C17H6109.4°109.5°
H8C2H9109.5°109.4°
H13C36H14109.5°109.4°
H13C36H15109.5°109.5°
H14C36H15109.5°109.4°
H16C37H17109.5°109.5°
H16C37H18109.5°109.5°
H17C37H18109.5°109.5°
H20C4H21109.5°109.6°
H22C5H23109.5°109.5°
H24C6H25109.5°109.5°
H27N28H28109.5°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
N28C27S29N26179.5°179.9°
N28C27S29C30179.7°180.0°
N28C27N26C25180.0°179.9°
C27N28H27H28120.0°180.0°
S29C27N26C250.5°0.1°
C27S29C30C250.1°0.1°
C27S29C30H11179.9°179.8°
S29C27N28H270.0°0.0°
S29C27N28H28120.0°180.0°
N26C27S29C300.2°0.0°
C27N26C25C300.6°0.2°
C27N26C25C24179.7°180.0°
N26C27N28H27179.4°180.0°
N26C27N28H2859.4°0.0°
S29C30C25N260.4°0.2°
S29C30C25H11180.0°180.0°
S29C30C25C24179.5°180.0°
N26C25C30C24179.1°179.8°
N26C25C24N231.7°174.6°
N26C25C24C31178.5°5.5°
N26C25C30H11179.6°179.7°
C30C25C24N23177.3°5.7°
C30C25C24C310.5°174.3°
C25C24N23C31176.9°180.0°
C25C24N23O22178.8°174.9°
C25C24C31O3298.8°174.1°
C25C24C31N3383.2°5.9°
C24C25C30H110.5°0.0°
O21C19O20C18179.9°180.0°
O21C19C18O2224.1°5.0°
O21C19C18C1796.1°115.0°
O21C19C18H7144.5°125.0°
O21C19O20H330.0°0.0°
N23C24C31O3284.3°6.0°
N23C24C31N3393.6°174.1°
C24N23O22C18175.5°180.0°
C31C24N23O221.9°5.1°
C24C31O32N33177.8°180.0°
C24C31N33C34165.7°175.1°
C24C31N33H2914.3°4.9°
N23O22C18C1968.6°85.0°
N23O22C18C17172.0°155.0°
N23O22C18H751.1°35.0°
O20C19C18O22156.0°175.0°
O20C19C18C1783.8°64.9°
O20C19C18H735.6°55.0°
C19C18O22C17119.4°120.0°
C19C18O22H7119.7°119.9°
C19C18C17H7119.6°119.9°
C19C18C17O16172.4°55.1°
C19C18C17H567.8°65.0°
C19C18C17H652.6°175.0°
C18C19O20H33179.9°180.0°
O32C31N33C3416.4°4.9°
O32C31N33H29163.6°175.1°
C31N33C34H29180.0°180.0°
C31N33C34C39139.1°85.0°
C31N33C34C3596.3°155.0°
C31N33C34H1223.3°35.0°
O22C18C17H7121.7°120.0°
O22C18C17O1668.9°65.0°
O22C18C17H550.9°175.0°
O22C18C17H6171.3°55.0°
C18C17O16H5119.8°120.0°
C18C17O16H6119.8°119.9°
C18C17O16C13174.9°180.0°
C18C17H5H6120.6°119.9°
N33C34C39C35126.9°120.0°
N33C34C39H12116.2°120.0°
N33C34C35H12120.2°120.1°
N33C34C39O4018.3°0.0°
N33C34C35C37113.0°60.0°
N33C34C35C368.2°60.0°
N33C34C35N38131.0°180.0°
N33C34C39H19161.7°180.0°
C39C34C35H12117.2°120.0°
C34C39O40H19180.0°180.0°
C39C34C35C37124.4°60.0°
C39C34C35C36114.4°180.0°
C39C34C35N388.4°60.0°
C39C34N33H2940.9°95.0°
C35C34C39O40108.6°120.0°
C34C35C37C36120.6°120.0°
C34C35C37N38122.4°120.0°
C34C35C36N38126.3°120.0°
C34C35N38O4169.1°180.0°
C34C35C36H13180.0°60.0°
C34C35C36H1460.0°180.0°
C34C35C36H1560.0°60.0°
C34C35C37H16180.0°60.1°
C34C35C37H1760.0°180.0°
C34C35C37H1860.0°60.0°
C35C34C39H1971.4°60.0°
C35C34N33H2983.7°25.0°
C34C35N38H3051.6°56.0°
O40C39C34H12134.5°120.0°
C17O16C13C129.0°180.0°
C17O16C13C14171.5°0.0°
O16C17H5H6120.6°120.1°
O16C17C18H752.8°175.0°
C37C35C36N38114.5°120.0°
C37C35N38O41173.2°60.0°
C37C35C34H127.2°180.0°
C37C35C36H1360.8°60.0°
C37C35C36H1459.2°60.0°
C37C35C36H15179.2°180.0°
C35C37H16H17120.0°120.0°
C35C37H16H18120.0°120.0°
C35C37H17H18120.0°120.0°
C37C35N38H3066.1°64.0°
O16C13C12C14179.4°180.0°
O16C13C12C11179.8°179.9°
O16C13C14C15179.9°179.8°
O16C13C12H20.2°0.0°
O16C13C14H30.1°0.1°
C13O16C17H565.3°60.0°
C13O16C17H655.0°60.1°
C36C35N38O4154.6°60.0°
C36C35C34H12128.3°60.0°
C35C36H13H14120.0°120.0°
C35C36H13H15120.0°120.1°
C35C36H14H15120.0°120.0°
C36C35C37H1659.4°180.0°
C36C35C37H17179.4°60.0°
C36C35C37H1860.6°60.0°
C36C35N38H30175.2°176.0°
C35N38O41H30120.7°124.0°
C35N38O41S42132.7°180.0°
N38C35C34H12108.8°60.0°
N38C35C36H1353.7°180.0°
N38C35C36H14173.7°60.0°
N38C35C36H1566.3°60.0°
N38C35C37H1657.6°60.0°
N38C35C37H1762.4°60.0°
N38C35C37H18177.6°180.0°
N38O41S42O44171.4°171.5°
N38O41S42O4555.0°38.6°
N38O41S42O4366.2°75.0°
C13C12C11H2180.0°180.0°
C12C13C14C150.5°0.3°
C13C12C11C100.8°0.0°
C13C12C11H1179.2°179.9°
C12C13C14H3179.6°180.0°
C14C13C12C110.7°0.0°
C13C14C15H3180.0°179.7°
C13C14C15C100.2°0.6°
C14C13C12H2179.3°180.0°
C13C14C15H4179.7°180.0°
O41S42O44O45117.5°122.9°
O41S42O44O43120.8°114.1°
O41S42O45O43120.1°114.1°
S42O41N38H30106.6°56.0°
O41S42O43H34119.9°179.9°
C12C11C10H1180.0°180.0°
C12C11C10C150.5°0.2°
C12C11C10C8179.7°180.0°
C14C15C10C110.3°0.6°
C14C15C10H4180.0°179.5°
C14C15C10C8180.0°179.7°
C11C10C15C8179.8°179.7°
C11C10C8N711.6°180.0°
C11C10C8N9168.3°0.0°
C10C11C12H2179.2°180.0°
C11C10C15H4179.7°180.0°
O44S42O45O43122.1°123.0°
O44S42O43H34119.2°66.5°
O45S42O43H340.0°66.4°
C15C10C8N7168.7°0.3°
C15C10C8N911.4°179.7°
C15C10C11H1179.5°179.8°
C10C15C14H3179.8°179.8°
C10C8N7N9179.9°180.0°
C10C8N7C378.0°180.0°
C8C10C11H10.3°0.1°
C8C10C15H40.1°0.3°
C10C8N7H31102.0°0.0°
C10C8N9H32179.9°180.0°
N1C2C3H8120.3°120.1°
N1C2C3H9120.4°120.0°
C2N1C6H26120.1°124.1°
C2N1C6C562.2°61.7°
N1C2C3N7177.0°179.1°
N1C2C3C453.8°59.2°
N1C2H8H9119.0°120.0°
N1C2C3H1064.1°60.7°
C2N1C6H24177.8°58.3°
C2N1C6H2557.9°178.3°
C3C2N1C659.0°61.7°
C2C3N7C8108.0°85.0°
C2C3N7C4123.0°119.8°
C2C3N7H10118.3°120.1°
C2C3C4H10117.9°119.9°
C2C3C4C552.2°57.6°
C3C2H8H9119.0°119.9°
C2C3C4H2067.9°62.2°
C2C3C4H21172.4°177.5°
C3C2N1H2661.1°62.3°
C2C3N7H3172.0°95.0°
N1C6C5H24120.1°120.0°
N1C6C5H25120.0°120.0°
N1C6C5C460.7°59.2°
C6N1C2H861.3°178.2°
C6N1C2H9179.4°58.3°
N1C6C5H2259.3°179.1°
N1C6C5H23179.2°60.8°
N1C6H24H25119.9°120.0°
C6C5C4C355.8°57.6°
C6C5C4H22120.0°120.0°
C6C5C4H23120.0°120.0°
C6C5C4H2064.3°62.3°
C6C5C4H21176.0°177.5°
C6C5H22H23119.9°120.2°
C5C6H24H25119.9°119.9°
C5C6N1H2658.0°62.4°
C8N7C3H31180.0°180.0°
C8N7C3C415.0°155.2°
C8N7C3H10133.7°35.2°
N7C8N9H320.0°0.1°
N9C8N7C3102.1°0.0°
N9C8N7H3177.9°179.9°
N7C3C4H10119.3°120.1°
N7C3C4C5175.0°177.6°
N7C3C2H856.7°60.8°
N7C3C2H962.6°59.1°
N7C3C4H2054.9°57.7°
N7C3C4H2164.8°62.5°
C3C4C5H20120.2°119.9°
C3C4C5H21120.2°119.9°
C4C3C2H866.5°179.3°
C4C3C2H9174.2°60.8°
C3C4H20H21119.5°120.2°
C3C4C5H2264.2°177.7°
C3C4C5H23175.9°62.3°
C4C3N7H31165.0°24.8°
C5C4C3H1065.7°62.3°
C5C4H20H21119.5°120.1°
C4C5H22H23119.9°120.0°
C4C5C6H24179.2°60.9°
C4C5C6H2559.3°179.2°
H1C11C12H20.8°0.0°
H3C14C15H40.2°0.3°
H5C17C18H7172.6°55.0°
H6C17C18H767.0°65.0°
H8C2C3H10175.5°59.4°
H8C2N1H26178.6°57.7°
H9C2C3H1056.2°179.3°
H9C2N1H2659.3°177.7°
H10C3C4H20174.1°177.8°
H10C3C4H2154.5°57.6°
H10C3N7H3146.3°144.8°
H12C34C39H1945.5°60.0°
H12C34N33H29156.7°145.1°
H13C36H14H15120.0°119.9°
H16C37H17H18120.0°120.0°
H20C4C5H22175.6°57.7°
H20C4C5H2355.7°177.8°
H21C4C5H2256.0°62.4°
H21C4C5H2363.9°57.6°
H22C5C6H2460.8°59.1°
H22C5C6H25179.3°60.9°
H23C5C6H2459.2°179.2°
H23C5C6H2560.7°59.3°
H24C6N1H2662.1°177.6°
H25C6N1H26178.0°57.6°

223532

PDB entries from 2024-08-07

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