VKC
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| C | O | doub | 1.21Å | 1.25Å | |
| C | CA | sing | 1.51Å | 1.51Å | |
| C | OXT | sing | 1.34Å | 1.25Å | |
| CA | OAD | sing | 1.43Å | 1.42Å | |
| CD | CG | sing | 1.53Å | 1.53Å | |
| CD | OE1 | sing | 1.43Å | 1.44Å | |
| CG | OAD | sing | 1.43Å | 1.42Å | |
| CA | HA | sing | 1.09Å | 1.10Å | |
| CA | HAA | sing | 1.09Å | 1.10Å | |
| CD | HD | sing | 1.09Å | 1.10Å | |
| CD | HDA | sing | 1.09Å | 1.10Å | |
| CG | HG | sing | 1.09Å | 1.10Å | |
| CG | HGA | sing | 1.09Å | 1.10Å | |
| OE1 | HOE1 | sing | 0.97Å | 0.95Å | |
| OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| O | C | CA | 118.7° | 120.0° |
| O | C | OXT | 122.2° | 120.0° |
| CA | C | OXT | 119.1° | 120.0° |
| C | CA | OAD | 108.9° | 109.4° |
| C | CA | HA | 109.6° | 109.4° |
| C | CA | HAA | 109.6° | 109.4° |
| C | OXT | HXT | 109.5° | 117.0° |
| CA | OAD | CG | 114.0° | 114.0° |
| OAD | CA | HA | 109.6° | 109.5° |
| OAD | CA | HAA | 109.6° | 109.5° |
| CG | CD | OE1 | 110.5° | 109.5° |
| CD | CG | OAD | 108.5° | 109.5° |
| CG | CD | HD | 109.2° | 109.4° |
| CG | CD | HDA | 109.2° | 109.5° |
| CD | CG | HG | 109.7° | 109.5° |
| CD | CG | HGA | 109.7° | 109.5° |
| OE1 | CD | HD | 109.2° | 109.5° |
| OE1 | CD | HDA | 109.2° | 109.5° |
| CD | OE1 | HOE1 | 109.5° | 114.0° |
| OAD | CG | HG | 109.7° | 109.5° |
| OAD | CG | HGA | 109.7° | 109.5° |
| HA | CA | HAA | 109.4° | 109.5° |
| HD | CD | HDA | 109.5° | 109.5° |
| HG | CG | HGA | 109.5° | 109.4° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| O | C | CA | OXT | 179.8° | 179.7° |
| O | C | CA | OAD | 24.2° | 0.0° |
| O | C | CA | HA | 95.7° | 120.0° |
| O | C | CA | HAA | 144.1° | 120.0° |
| O | C | OXT | HXT | 0.0° | 0.0° |
| C | CA | OAD | HA | 119.9° | 120.0° |
| C | CA | OAD | HAA | 119.9° | 119.9° |
| C | CA | OAD | CG | 151.1° | 180.0° |
| C | CA | HA | HAA | 120.3° | 119.9° |
| CA | C | OXT | HXT | 179.8° | 179.7° |
| OXT | C | CA | OAD | 155.6° | 179.7° |
| OXT | C | CA | HA | 84.5° | 59.7° |
| OXT | C | CA | HAA | 35.7° | 60.3° |
| CA | OAD | CG | CD | 140.8° | 180.0° |
| OAD | CA | HA | HAA | 120.3° | 120.1° |
| CA | OAD | CG | HG | 21.0° | 60.0° |
| CA | OAD | CG | HGA | 99.3° | 60.0° |
| CG | CD | OE1 | HD | 120.2° | 119.9° |
| CG | CD | OE1 | HDA | 120.2° | 120.0° |
| CD | CG | OAD | HG | 119.9° | 120.0° |
| CD | CG | OAD | HGA | 119.8° | 120.0° |
| CG | CD | HD | HDA | 119.6° | 120.0° |
| CD | CG | HG | HGA | 120.4° | 120.0° |
| CG | CD | OE1 | HOE1 | 180.0° | 179.9° |
| OE1 | CD | CG | OAD | 145.4° | 65.0° |
| OE1 | CD | HD | HDA | 119.5° | 120.0° |
| OE1 | CD | CG | HG | 25.5° | 175.0° |
| OE1 | CD | CG | HGA | 94.8° | 55.0° |
| CG | OAD | CA | HA | 31.2° | 60.0° |
| CG | OAD | CA | HAA | 88.9° | 60.1° |
| OAD | CG | CD | HD | 25.2° | 175.0° |
| OAD | CG | CD | HDA | 94.5° | 55.0° |
| OAD | CG | HG | HGA | 120.5° | 120.0° |
| HD | CD | CG | HG | 94.6° | 55.0° |
| HD | CD | CG | HGA | 145.1° | 65.0° |
| HD | CD | OE1 | HOE1 | 59.8° | 60.0° |
| HDA | CD | CG | HG | 145.6° | 65.0° |
| HDA | CD | CG | HGA | 25.3° | 175.0° |
| HDA | CD | OE1 | HOE1 | 59.9° | 60.0° |
