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VJI

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
CC1doub1.38Å1.38ÅAromatic
CC5sing1.38Å1.38ÅAromatic
C1C2sing1.39Å1.38ÅAromatic
C6N1sing1.47Å1.54Å
C6C5sing1.51Å1.49Å
C6C7sing1.53Å1.56Å
C5C4doub1.38Å1.38ÅAromatic
C7Nsing1.47Å1.45Å
C2O1sing1.36Å1.34Å
C2C3doub1.39Å1.35ÅAromatic
O1C9sing1.43Å1.42Å
C4C3sing1.39Å1.37ÅAromatic
C3Osing1.36Å1.32Å
C9C8sing1.53Å1.53Å
OC8sing1.43Å1.42Å
N1H1sing1.01Å1.00Å
N1H2sing1.01Å1.00Å
C7H4sing1.09Å1.10Å
C7H5sing1.09Å1.10Å
C8H6sing1.09Å1.10Å
C8H7sing1.09Å1.10Å
C9H8sing1.09Å1.10Å
C9H9sing1.09Å1.10Å
C1H10sing1.08Å1.08Å
C6H11sing1.09Å1.10Å
C4H12sing1.08Å1.08Å
NH13sing1.01Å1.00Å
NH14sing1.01Å1.00Å
CH16sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C1CC5119.9°120.1°
CC1C2119.2°120.0°
CC1H10120.4°119.9°
C1CH16120.1°119.9°
CC5C6119.0°120.0°
CC5C4120.4°120.1°
C5CH16120.0°120.0°
C1C2O1119.0°119.4°
C1C2C3120.4°119.9°
C2C1H10120.4°120.0°
N1C6C5107.0°109.5°
N1C6C7113.4°109.5°
C6N1H1109.5°111.0°
C6N1H2109.4°111.0°
N1C6H11107.5°109.4°
C5C6C7113.5°109.5°
C6C5C4120.5°119.9°
C5C6H11108.1°109.5°
C6C7N111.4°109.5°
C6C7H4109.0°109.5°
C6C7H5109.0°109.5°
C7C6H11107.1°109.5°
C5C4C3118.8°120.1°
C5C4H12120.6°120.0°
NC7H4109.0°109.5°
NC7H5109.0°109.4°
C7NH13109.5°111.0°
C7NH14109.5°111.0°
O1C2C3120.5°120.8°
C2O1C9117.5°116.7°
C2C3C4121.2°119.8°
C2C3O119.9°120.8°
O1C9C8112.7°108.2°
O1C9H8108.7°109.7°
O1C9H9108.7°109.7°
C4C3O118.9°119.4°
C3C4H12120.6°119.9°
C3OC8111.2°116.6°
C9C8O110.5°108.3°
C9C8H6109.2°109.7°
C9C8H7109.2°109.7°
C8C9H8108.7°109.7°
C8C9H9108.7°109.7°
OC8H6109.2°109.7°
OC8H7109.2°109.7°
H1N1H2109.5°111.0°
H4C7H5109.5°109.4°
H6C8H7109.5°109.7°
H8C9H9109.5°109.7°
H13NH14109.5°111.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C1CC5H16180.0°180.0°
CC1C2H10180.0°180.0°
C1CC5C6176.5°179.9°
C1CC5C41.1°0.1°
CC1C2O1174.1°179.8°
CC1C2C32.4°0.1°
C5CC1C20.7°0.0°
CC5C6N1123.3°40.1°
CC5C6C4177.6°180.0°
CC5C6C7110.8°80.0°
CC5C4C31.4°0.0°
C5CC1H10179.3°179.9°
CC5C6H117.9°160.0°
CC5C4H12178.6°180.0°
C1C2O1C3176.5°179.9°
C1C2O1C9154.3°163.0°
C1C2C3C42.2°0.1°
C1C2C3O177.0°179.8°
C2C1CH16179.3°179.9°
N1C6C5C7125.9°120.0°
N1C6C5H11115.5°120.0°
N1C6C7H11118.4°119.9°
N1C6C5C454.3°139.9°
N1C6C7N4.2°55.0°
C6N1H1H2120.0°124.0°
N1C6C7H4116.1°65.1°
N1C6C7H5124.5°175.0°
C5C6C7H11119.2°120.0°
C5C6C7N126.7°175.0°
C6C5C4C3176.2°180.0°
C5C6N1H1180.0°63.9°
C5C6N1H260.0°60.0°
C5C6C7H46.3°54.9°
C5C6C7H5113.1°65.0°
C6C5C4H123.8°0.0°
C6C5CH163.5°0.1°
C7C6C5C471.6°100.0°
C6C7NH4120.3°120.1°
C6C7NH5120.3°120.0°
C7C6N1H154.1°176.0°
C7C6N1H2174.1°60.0°
C6C7H4H5119.1°120.0°
C6C7NH13180.0°56.1°
C6C7NH1460.0°180.0°
C5C4C3C20.3°0.1°
C5C4C3H12180.0°180.0°
C5C4C3O178.9°179.8°
C4C5C6H11169.7°20.0°
C4C5CH16178.8°179.9°
NC7H4H5119.1°119.9°
NC7C6H11114.2°64.9°
C7NH13H14120.0°123.9°
O1C2C3C4174.3°179.8°
O1C2C3O6.6°0.3°
C2O1C9C86.1°46.1°
C2O1C9H8126.5°73.5°
C2O1C9H9114.4°165.8°
O1C2C1H105.9°0.2°
C3C2O1C929.2°17.2°
C2C3C4O179.2°179.9°
C2C3OC838.3°17.3°
C3C2C1H10177.6°179.9°
C2C3C4H12179.7°179.9°
O1C9C8H8120.5°119.7°
O1C9C8H9120.5°119.7°
O1C9C8O35.8°59.8°
O1C9C8H6155.9°60.0°
O1C9C8H784.4°179.5°
O1C9H8H9118.5°120.6°
C4C3OC8140.8°162.8°
C3OC8C957.9°46.3°
C3OC8H6178.1°73.5°
C3OC8H762.3°166.0°
OC3C4H121.1°0.2°
C9C8OH6120.2°119.7°
C9C8OH7120.2°119.7°
C9C8H6H7119.5°120.6°
C8C9H8H9118.5°120.6°
OC8H6H7119.5°120.6°
OC8C9H884.7°59.9°
OC8C9H9156.3°179.5°
H1N1C6H1164.1°56.1°
H2N1C6H1155.9°179.9°
H4C7C6H11125.5°175.0°
H4C7NH1359.7°64.0°
H4C7NH14179.7°59.9°
H5C7C6H116.1°55.0°
H5C7NH1359.7°176.1°
H5C7NH1460.3°60.0°
H6C8C9H835.5°179.7°
H6C8C9H983.6°59.8°
H7C8C9H8155.1°59.8°
H7C8C9H936.1°60.7°
H10C1CH160.7°0.1°

222415

PDB entries from 2024-07-10

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