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VJ8

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
CBGNBHsing1.46Å1.49Å
CBGCBFsing1.53Å1.54Å
NBHCBIsing1.35Å1.32Å
CBICBJsing1.51Å1.56Å
CBIOBKdoub1.21Å1.23Å
CBJCBLsing1.53Å1.51Å
CBFNBEsing1.46Å1.45Å
NBECBCsing1.35Å1.31Å
CBCOBDdoub1.22Å1.24Å
CBCO3Asing1.35Å1.37Å
N2C2sing1.37Å1.33Å
O3AC3Asing1.45Å1.44Å
C4AO4Asing1.44Å1.48Å
C4AC5Asing1.53Å1.55Å
C4AC3Asing1.54Å1.56Å
O4AC1Asing1.44Å1.43Å
C2N3doub1.31Å1.36Å
C2N1sing1.36Å1.40Å
N3C4sing1.34Å1.35Å
C1AN9sing1.47Å1.51Å
C1AC2Asing1.55Å1.46Å
C5AO5Asing1.43Å1.43Å
C3AC2Asing1.55Å1.52Å
N1C6sing1.35Å1.37Å
C4N9sing1.37Å1.36ÅAromatic
C4C5doub1.40Å1.35ÅAromatic
N9C8sing1.36Å1.34ÅAromatic
C2AO2Asing1.43Å1.52Å
C6C5sing1.41Å1.36Å
C6O6doub1.22Å1.25Å
C5N7sing1.36Å1.37ÅAromatic
O5APAUsing1.61Å1.59Å
OAXPAWdoub1.48Å1.55Å
C8N7doub1.30Å1.34ÅAromatic
OAVPAUsing1.61Å1.66Å
OAVPAWsing1.61Å1.67Å
OBAPAWsing1.61Å1.47Å
PAUOAZdoub1.48Å1.50Å
PAUOBBsing1.61Å1.51Å
PAWOAYsing1.61Å1.51Å
C8H1sing1.08Å1.08Å
N1H2sing0.97Å1.00Å
N2H3sing0.97Å1.00Å
N2H4sing0.97Å1.00Å
C1AH5sing1.09Å1.10Å
C2AH6sing1.09Å1.10Å
C3AH7sing1.09Å1.10Å
C4AH8sing1.09Å1.10Å
C5AH9sing1.09Å1.10Å
C5AH10sing1.09Å1.10Å
CBFH11sing1.09Å1.10Å
CBFH12sing1.09Å1.10Å
CBGH13sing1.09Å1.10Å
CBGH14sing1.09Å1.10Å
CBJH15sing1.09Å1.10Å
CBJH16sing1.09Å1.10Å
CBLH17sing1.09Å1.10Å
CBLH18sing1.09Å1.10Å
CBLH19sing1.09Å1.10Å
NBEH20sing0.97Å1.00Å
NBHH21sing0.97Å1.00Å
O2AH22sing0.97Å0.95Å
OAYH23sing0.97Å0.95Å
OBAH24sing0.97Å0.95Å
OBBH25sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
NBHCBGCBF115.0°109.5°
CBGNBHCBI121.9°120.1°
NBHCBGH13108.1°109.5°
NBHCBGH14108.1°109.5°
CBGNBHH21119.0°120.0°
CBGCBFNBE110.6°109.5°
CBGCBFH11109.2°109.5°
CBGCBFH12109.2°109.5°
CBFCBGH13108.1°109.5°
CBFCBGH14108.1°109.5°
NBHCBICBJ115.6°120.1°
NBHCBIOBK121.3°120.0°
CBINBHH21119.1°120.0°
CBJCBIOBK123.2°120.0°
CBICBJCBL107.6°109.5°
CBICBJH15109.9°109.5°
CBICBJH16110.0°109.5°
CBLCBJH15109.9°109.4°
CBLCBJH16109.9°109.5°
CBJCBLH17109.5°109.5°
CBJCBLH18109.4°109.5°
CBJCBLH19109.5°109.5°
CBFNBECBC123.9°120.0°
NBECBFH11109.2°109.5°
NBECBFH12109.2°109.5°
CBFNBEH20118.1°120.0°
NBECBCOBD123.0°120.0°
NBECBCO3A114.5°120.0°
CBCNBEH20118.0°120.0°
OBDCBCO3A122.5°120.0°
CBCO3AC3A114.9°117.0°
N2C2N3119.1°119.1°
N2C2N1122.5°119.0°
C2N2H3120.0°120.0°
C2N2H4120.0°120.0°
O3AC3AC4A106.9°110.6°
O3AC3AC2A108.0°110.5°
O3AC3AH7114.7°110.5°
O4AC4AC5A105.9°109.9°
O4AC4AC3A106.4°107.3°
C4AO4AC1A107.3°107.0°
O4AC4AH8111.9°109.9°
C5AC4AC3A110.8°109.9°
C4AC5AO5A110.7°109.5°
C5AC4AH8110.9°109.9°
C4AC5AH9109.2°109.5°
C4AC5AH10109.2°109.5°
C4AC3AC2A100.2°104.2°
C4AC3AH7112.6°110.5°
C3AC4AH8110.7°110.0°
O4AC1AN9105.3°110.6°
O4AC1AC2A105.6°103.5°
O4AC1AH5112.1°110.7°
N3C2N1118.3°121.9°
C2N3C4118.6°121.1°
C2N1C6121.0°120.3°
C2N1H2119.5°119.8°
N3C4N9129.1°134.2°
N3C4C5124.0°119.7°
N9C1AC2A111.2°110.7°
C1AN9C4127.5°126.3°
C1AN9C8123.5°126.3°
N9C1AH5110.8°110.6°
C1AC2AC3A104.3°102.1°
C1AC2AO2A109.1°110.9°
C2AC1AH5111.5°110.6°
C1AC2AH6111.6°110.9°
C5AO5APAU117.2°123.0°
O5AC5AH9109.2°109.5°
O5AC5AH10109.1°109.4°
C3AC2AO2A110.2°110.9°
C3AC2AH6110.7°111.0°
C2AC3AH7113.3°110.4°
N1C6C5119.5°118.3°
N1C6O6116.9°120.8°
C6N1H2119.5°119.9°
N9C4C5106.9°106.1°
C4N9C8108.9°107.5°
C4C5C6118.4°118.6°
C4C5N7108.6°107.3°
N9C8N7108.3°109.8°
N9C8H1125.8°125.1°
O2AC2AH6110.7°110.8°
C2AO2AH22109.5°114.0°
C5C6O6123.5°120.8°
C6C5N7133.0°134.1°
C5N7C8107.3°109.4°
O5APAUOAV98.7°109.4°
O5APAUOAZ111.7°109.5°
O5APAUOBB103.0°109.4°
OAXPAWOAV102.6°109.5°
OAXPAWOBA114.6°109.5°
OAXPAWOAY113.1°109.5°
N7C8H1125.8°125.1°
PAUOAVPAW126.9°134.0°
OAVPAUOAZ110.3°109.5°
OAVPAUOBB112.0°109.5°
OAVPAWOBA101.9°109.5°
OAVPAWOAY107.4°109.5°
OBAPAWOAY115.4°109.5°
PAWOBAH24109.5°114.1°
OAZPAUOBB118.9°109.5°
PAUOBBH25109.5°114.0°
PAWOAYH23109.5°114.1°
H3N2H4120.0°120.0°
H9C5AH10109.5°109.4°
H11CBFH12109.5°109.5°
H13CBGH14109.5°109.4°
H15CBJH16109.5°109.4°
H17CBLH18109.5°109.4°
H17CBLH19109.5°109.4°
H18CBLH19109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
NBHCBGCBFH13120.8°120.1°
NBHCBGCBFH14120.8°120.0°
CBGNBHCBIH21180.0°180.0°
CBGNBHCBICBJ179.6°180.0°
CBGNBHCBIOBK0.6°0.0°
NBHCBGCBFNBE85.3°180.0°
NBHCBGCBFH1134.8°60.0°
NBHCBGCBFH12154.5°60.0°
NBHCBGH13H14117.5°119.9°
CBFCBGNBHCBI96.2°180.0°
CBGCBFNBEH11120.2°120.0°
CBGCBFNBEH12120.2°120.0°
CBGCBFNBECBC91.0°180.0°
CBGCBFH11H12119.5°120.0°
CBFCBGH13H14117.5°120.0°
CBGCBFNBEH2088.9°0.0°
CBFCBGNBHH2183.8°0.0°
NBHCBICBJOBK179.8°180.0°
NBHCBICBJCBL123.2°180.0°
CBINBHCBGH13143.0°59.9°
CBINBHCBGH1424.6°60.0°
NBHCBICBJH15117.1°60.0°
NBHCBICBJH163.5°59.9°
CBICBJCBLH15119.7°120.0°
CBICBJCBLH16119.7°120.1°
CBICBJH15H16120.9°120.0°
CBICBJCBLH17180.0°180.0°
CBICBJCBLH1860.0°60.0°
CBICBJCBLH1960.0°59.9°
CBJCBINBHH210.4°0.0°
OBKCBICBJCBL56.5°0.0°
OBKCBICBJH1563.2°120.0°
OBKCBICBJH16176.2°120.1°
OBKCBINBHH21179.4°180.0°
CBLCBJH15H16120.9°120.0°
CBJCBLH17H18120.0°120.0°
CBJCBLH17H19120.0°120.1°
CBJCBLH18H19120.0°120.0°
CBFNBECBCH20180.0°180.0°
CBFNBECBCOBD3.7°0.0°
CBFNBECBCO3A176.3°180.0°
NBECBFH11H12119.5°120.0°
NBECBFCBGH13153.8°60.0°
NBECBFCBGH1435.5°60.0°
NBECBCOBDO3A179.9°179.9°
NBECBCO3AC3A175.6°180.0°
CBCNBECBFH1129.1°60.0°
CBCNBECBFH12148.8°60.0°
OBDCBCO3AC3A4.5°0.1°
OBDCBCNBEH20176.3°180.0°
CBCO3AC3AC4A76.3°153.7°
CBCO3AC3AC2A176.6°91.5°
CBCO3AC3AH749.3°31.0°
O3ACBCNBEH203.6°0.0°
N2C2N3N1175.7°179.4°
N2C2N3C4177.0°180.0°
N2C2N1C6179.3°179.7°
N2C2N1H20.7°0.3°
C2N2H3H4180.0°179.9°
O3AC3AC4AO4A94.1°120.8°
O3AC3AC4AC5A151.2°119.8°
O3AC3AC4AC2A112.5°118.7°
O3AC3AC4AH7126.8°122.7°
O3AC3AC2AC1A76.1°97.9°
O3AC3AC2AH7128.2°122.5°
O3AC3AC2AO2A40.9°20.2°
O3AC3AC2AH6163.8°143.8°
O3AC3AC4AH827.7°1.2°
O4AC4AC5AC3A115.0°117.9°
O4AC4AC5AH8121.6°121.0°
O4AC4AC3AH8121.8°119.5°
C4AO4AC1AN9146.5°158.6°
C4AO4AC1AC2A28.8°40.1°
O4AC4AC5AO5A62.4°66.4°
O4AC4AC3AC2A18.5°2.0°
C4AO4AC1AH592.9°78.5°
O4AC4AC3AH7139.1°116.6°
O4AC4AC5AH957.8°173.5°
O4AC4AC5AH10177.4°53.6°
C5AC4AC3AH8123.5°121.1°
C5AC4AO4AC1A123.5°145.9°
C4AC5AO5AH9120.2°120.0°
C4AC5AO5AH10120.2°120.0°
C5AC4AC3AC2A96.3°121.5°
C4AC5AO5APAU147.2°180.0°
C5AC4AC3AH724.4°2.9°
C4AC5AH9H10119.4°120.0°
C3AC4AO4AC1A5.5°26.5°
C4AC3AC2AC1A35.5°20.9°
C3AC4AC5AO5A52.6°175.7°
C4AC3AC2AH7120.2°118.6°
C4AC3AC2AO2A152.5°139.1°
C4AC3AC2AH684.6°97.3°
C3AC4AC5AH9172.8°55.7°
C3AC4AC5AH1067.6°64.3°
O4AC1AN9C2A113.9°114.1°
O4AC1AN9H5121.5°123.0°
O4AC1AC2AH5122.1°118.6°
O4AC1AC2AC3A41.3°37.0°
O4AC1AN9C4113.0°161.0°
O4AC1AN9C862.1°19.1°
O4AC1AC2AO2A159.0°155.2°
O4AC1AC2AH678.3°81.3°
C1AO4AC4AH8115.6°93.0°
N3C2N1C63.8°0.3°
C2N3C4N9179.4°179.7°
C2N3C4C50.6°0.5°
N3C2N1H2176.2°179.7°
N3C2N2H30.0°0.1°
N3C2N2H4180.0°180.0°
N1C2N3C41.3°0.6°
C2N1C6H2180.0°180.0°
C2N1C6C54.3°0.0°
C2N1C6O6176.4°179.9°
N1C2N2H3175.5°179.5°
N1C2N2H44.5°0.6°
N3C4N9C1A2.3°0.2°
N3C4N9C5180.0°179.8°
N3C4N9C8178.0°179.7°
N3C4C5C60.1°0.2°
N3C4C5N7179.2°179.8°
N9C1AC2AH5124.3°122.9°
N9C1AC2AC3A155.0°155.5°
C1AN9C4C8175.7°179.9°
C1AN9C4C5177.6°179.9°
N9C1AC2AO2A87.3°86.3°
C1AN9C8N7178.3°179.9°
C1AN9C8H11.7°0.1°
N9C1AC2AH635.4°37.3°
C1AC2AC3AO2A117.0°118.2°
C1AC2AC3AH6120.1°118.2°
C2AC1AN9C4133.1°84.9°
C2AC1AN9C851.8°94.9°
C1AC2AO2AH6123.2°123.6°
C1AC2AC3AH7155.7°139.5°
C1AC2AO2AH22180.0°61.5°
C5AO5APAUOAV58.6°175.0°
C5AO5APAUOAZ57.4°55.0°
C5AO5APAUOBB173.8°65.1°
O5AC5AC4AH8176.0°54.6°
O5AC5AH9H10119.4°120.0°
C3AC2AO2AH6122.8°123.7°
C3AC2AC1AH580.8°81.6°
C2AC3AC4AH8140.2°117.5°
C3AC2AO2AH2266.0°174.2°
N1C6C5C42.3°0.0°
N1C6C5O6179.2°180.0°
N1C6C5N7178.6°180.0°
N9C4C5C6179.9°179.9°
N9C4C5N70.8°0.0°
C4N9C8N72.4°0.1°
C4N9C8H1177.6°180.0°
C4N9C1AH58.4°38.0°
C5C4N9C82.0°0.0°
C4C5C6N7179.1°180.0°
C4C5C6O6178.5°180.0°
C4C5N7C80.7°0.0°
N9C8N7C51.9°0.0°
N9C8N7H1180.0°180.0°
C8N9C1AH5176.5°142.2°
O2AC2AC1AH536.9°36.6°
O2AC2AC3AH787.3°102.3°
C6C5N7C8178.5°180.0°
C5C6N1H2175.7°180.0°
O6C6C5N70.6°0.0°
O6C6N1H23.6°0.0°
C5N7C8H1178.1°180.0°
O5APAUOAVOAZ117.1°120.0°
O5APAUOAVOBB108.0°119.9°
O5APAUOAVPAW169.0°165.0°
O5APAUOAZOBB119.8°120.0°
PAUO5AC5AH992.6°59.9°
PAUO5AC5AH1027.0°60.0°
O5APAUOBBH25124.2°60.0°
OAXPAWOAVPAU115.5°40.0°
OAXPAWOAVOBA118.8°120.0°
OAXPAWOAVOAY119.5°120.0°
OAXPAWOBAOAY134.0°120.0°
OAXPAWOAYH230.0°180.0°
OAXPAWOBAH240.0°60.0°
PAUOAVPAWOBA125.7°160.0°
OAVPAUOAZOBB131.4°120.0°
PAUOAVPAWOAY4.0°80.0°
OAVPAUOBBH25130.6°60.0°
OAVPAWOBAOAY116.0°120.0°
PAWOAVPAUOAZ73.9°45.0°
PAWOAVPAUOBB61.0°75.0°
OAVPAWOAYH23112.5°60.1°
OAVPAWOBAH24110.0°180.0°
OBAPAWOAYH23134.7°60.0°
OAZPAUOBBH250.0°180.0°
OAYPAWOBAH24134.0°60.0°
H5C1AC2AH6159.7°160.1°
H6C2AC3AH735.6°21.3°
H6C2AO2AH2256.8°62.1°
H7C3AC4AH899.1°123.9°
H8C4AC5AH963.8°65.4°
H8C4AC5AH1055.8°174.6°
H11CBFCBGH1386.0°60.1°
H11CBFCBGH14155.6°180.0°
H11CBFNBEH20150.9°120.0°
H12CBFCBGH1333.7°180.0°
H12CBFCBGH1484.7°60.0°
H12CBFNBEH2031.2°120.0°
H13CBGNBHH2137.0°120.0°
H14CBGNBHH21155.4°120.0°
H15CBJCBLH1760.3°60.0°
H15CBJCBLH18179.7°180.0°
H15CBJCBLH1959.7°60.0°
H16CBJCBLH1760.3°60.0°
H16CBJCBLH1859.7°60.0°
H16CBJCBLH19179.7°180.0°
H17CBLH18H19120.0°119.9°

226262

PDB entries from 2024-10-16

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