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VHG

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O1DCGDdoub1.21Å1.26Å
CGDO2Dsing1.34Å1.27Å
CGDCBDsing1.51Å1.53Å
CBACAAsing1.53Å1.53Å
CBACGAsing1.51Å1.52Å
O2ACGAdoub1.21Å1.26Å
CAAC2Asing1.51Å1.52Å
CADCBDsing1.53Å1.52Å
CADC3Dsing1.51Å1.53Å
CMAC3Asing1.51Å1.53Å
CGAO1Asing1.34Å1.26Å
CMDC2Dsing1.51Å1.53Å
C2AC3Asing1.41Å1.33ÅAromatic
C2AC1Adoub1.35Å1.36ÅAromatic
C3AC4Adoub1.35Å1.38ÅAromatic
C3DC2Dsing1.41Å1.46ÅAromatic
C3DC4Ddoub1.35Å1.53ÅAromatic
C2DC1Ddoub1.35Å1.47ÅAromatic
NBC4Bsing1.35Å1.53Å
NBC1Bdoub1.31Å1.55Å
C1ACHAsing1.51Å1.53Å
C1ANAsing1.36Å1.37ÅAromatic
C4ACHBsing1.51Å1.53Å
C4ANAsing1.36Å1.37ÅAromatic
OBC4Bdoub1.21Å1.18Å
CHAC4Dsing1.51Å1.31Å
C4DNDsing1.36Å1.49ÅAromatic
CHBC1Bsing1.51Å1.31Å
C4BC3Bsing1.51Å1.48Å
C1BC2Bsing1.41Å1.48Å
C1DNDsing1.36Å1.48ÅAromatic
C1DCHDsing1.51Å1.53Å
CHDC4Csing1.51Å1.32Å
C3BC2Bdoub1.37Å1.42Å
C3BCABsing1.42Å1.51Å
C2BCMBsing1.51Å1.52Å
C4CNCsing1.38Å1.53Å
C4CC3Cdoub1.32Å1.48Å
NCC1Csing1.35Å1.53Å
CACC3Csing1.51Å1.30Å
CACCBCsing1.53Å1.48Å
CABCBBdoub1.34Å1.31Å
C3CC2Csing1.51Å1.52Å
C1CC2Csing1.52Å1.48Å
C1COCdoub1.21Å1.19Å
C2CCMCsing1.53Å1.52Å
C2CH1sing1.09Å1.10Å
CAAH2sing1.09Å1.10Å
CAAH3sing1.09Å1.10Å
CABH4sing1.08Å1.08Å
CACH5sing1.09Å1.10Å
CACH6sing1.09Å1.10Å
CADH7sing1.09Å1.10Å
CADH8sing1.09Å1.10Å
CBAH9sing1.09Å1.10Å
CBAH10sing1.09Å1.10Å
CBBH11sing1.08Å1.08Å
CBBH12sing1.08Å1.08Å
CBCH13sing1.09Å1.10Å
CBCH14sing1.09Å1.10Å
CBCH15sing1.09Å1.10Å
CBDH16sing1.09Å1.10Å
CBDH17sing1.09Å1.10Å
CHBH18sing1.09Å1.10Å
CHBH19sing1.09Å1.10Å
CHDH20sing1.09Å1.10Å
CHDH21sing1.09Å1.10Å
CMAH22sing1.09Å1.10Å
CMAH23sing1.09Å1.10Å
CMAH24sing1.09Å1.10Å
CMBH25sing1.09Å1.10Å
CMBH26sing1.09Å1.10Å
CMBH27sing1.09Å1.10Å
CMCH28sing1.09Å1.10Å
CMCH29sing1.09Å1.10Å
CMCH30sing1.09Å1.10Å
CMDH31sing1.09Å1.10Å
CMDH32sing1.09Å1.10Å
CMDH33sing1.09Å1.10Å
NAH34sing0.97Å1.00Å
NCH35sing0.97Å1.00Å
NDH36sing0.97Å1.00Å
CHAH37sing1.09Å1.10Å
CHAH38sing1.09Å1.10Å
O1AH39sing0.97Å0.95Å
O2DH40sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O1DCGDO2D119.5°120.0°
O1DCGDCBD119.3°120.0°
O2DCGDCBD121.2°120.0°
CGDO2DH40109.5°117.0°
CGDCBDCAD109.1°109.4°
CGDCBDH16109.6°109.5°
CGDCBDH17109.6°109.5°
CAACBACGA108.1°109.5°
CBACAAC2A108.0°109.5°
CBACAAH2109.9°109.5°
CBACAAH3109.8°109.5°
CAACBAH9109.8°109.5°
CAACBAH10109.8°109.5°
CBACGAO2A118.8°120.0°
CBACGAO1A119.9°120.0°
CGACBAH9109.8°109.4°
CGACBAH10109.8°109.5°
O2ACGAO1A121.3°120.0°
CAAC2AC3A126.1°126.3°
CAAC2AC1A124.9°126.3°
C2ACAAH2109.8°109.4°
C2ACAAH3109.8°109.5°
CBDCADC3D113.6°109.5°
CBDCADH7108.4°109.5°
CBDCADH8108.4°109.5°
CADCBDH16109.6°109.4°
CADCBDH17109.6°109.4°
CADC3DC2D126.6°126.3°
CADC3DC4D124.6°126.2°
C3DCADH7108.4°109.5°
C3DCADH8108.4°109.4°
CMAC3AC2A123.7°126.3°
CMAC3AC4A127.8°126.3°
C3ACMAH22109.5°109.5°
C3ACMAH23109.5°109.5°
C3ACMAH24109.5°109.5°
CGAO1AH39109.5°117.0°
CMDC2DC3D126.4°126.3°
CMDC2DC1D125.6°126.3°
C2DCMDH31109.5°109.5°
C2DCMDH32109.5°109.5°
C2DCMDH33109.5°109.4°
C3AC2AC1A108.9°107.4°
C2AC3AC4A108.5°107.5°
C2AC1ACHA120.1°125.9°
C2AC1ANA107.8°108.2°
C3AC4ACHB123.0°125.9°
C3AC4ANA106.9°108.2°
C2DC3DC4D108.8°107.4°
C3DC2DC1D108.0°107.4°
C3DC4DCHA125.4°125.9°
C3DC4DND105.9°108.2°
C2DC1DND108.9°108.3°
C2DC1DCHD127.3°125.9°
C4BNBC1B106.6°110.3°
NBC4BOB127.2°126.7°
NBC4BC3B105.3°106.5°
NBC1BCHB126.9°124.6°
NBC1BC2B106.6°110.8°
CHAC1ANA132.0°125.9°
C1ACHAC4D143.2°109.5°
C1ACHAH37100.5°109.4°
C1ACHAH38100.5°109.5°
C1ANAC4A107.9°108.8°
C1ANAH34126.1°125.6°
CHBC4ANA130.0°125.9°
C4ACHBC1B122.0°109.5°
C4ACHBH18106.3°109.5°
C4ACHBH19106.3°109.5°
C4ANAH34126.1°125.6°
OBC4BC3B127.5°126.8°
CHAC4DND128.6°125.9°
C4DCHAH37100.5°109.5°
C4DCHAH38100.5°109.5°
C4DNDC1D108.4°108.8°
C4DNDH36125.8°125.6°
CHBC1BC2B126.3°124.6°
C1BCHBH18106.2°109.5°
C1BCHBH19106.2°109.5°
C4BC3BC2B112.1°105.1°
C4BC3BCAB121.9°127.4°
C1BC2BC3B109.4°107.4°
C1BC2BCMB122.6°126.3°
NDC1DCHD123.9°125.9°
C1DNDH36125.8°125.7°
C1DCHDC4C114.9°109.5°
C1DCHDH20108.1°109.4°
C1DCHDH21108.1°109.4°
CHDC4CNC124.7°123.7°
CHDC4CC3C131.2°123.8°
C4CCHDH20108.1°109.5°
C4CCHDH21108.1°109.5°
C2BC3BCAB126.1°127.5°
C3BC2BCMB128.0°126.3°
C3BCABCBB116.9°120.0°
C3BCABH4121.5°120.0°
C2BCMBH25109.5°109.5°
C2BCMBH26109.5°109.4°
C2BCMBH27109.5°109.5°
NCC4CC3C104.1°112.5°
C4CNCC1C110.3°111.6°
C4CNCH35124.9°124.2°
C4CC3CCAC126.9°126.7°
C4CC3CC2C111.2°106.6°
NCC1CC2C106.2°105.7°
NCC1COC127.1°127.2°
C1CNCH35124.8°124.1°
C3CCACCBC114.7°109.5°
CACC3CC2C121.9°126.7°
C3CCACH5108.2°109.4°
C3CCACH6108.1°109.5°
CBCCACH5108.1°109.5°
CBCCACH6108.2°109.5°
CACCBCH13109.5°109.5°
CACCBCH14109.5°109.4°
CACCBCH15109.5°109.5°
CBBCABH4121.6°120.0°
CABCBBH11120.0°120.0°
CABCBBH12120.0°120.0°
C3CC2CC1C108.1°103.7°
C3CC2CCMC107.4°110.6°
C3CC2CH1111.5°110.7°
C2CC1COC126.6°127.2°
C1CC2CCMC105.9°110.6°
C1CC2CH1112.1°110.6°
CMCC2CH1111.5°110.5°
C2CCMCH28109.5°109.5°
C2CCMCH29109.5°109.5°
C2CCMCH30109.5°109.4°
H2CAAH3109.5°109.4°
H5CACH6109.5°109.5°
H7CADH8109.5°109.4°
H9CBAH10109.5°109.4°
H11CBBH12120.0°120.0°
H13CBCH14109.4°109.5°
H13CBCH15109.5°109.5°
H14CBCH15109.5°109.4°
H16CBDH17109.5°109.6°
H18CHBH19109.4°109.4°
H20CHDH21109.4°109.5°
H22CMAH23109.4°109.5°
H22CMAH24109.5°109.4°
H23CMAH24109.5°109.4°
H25CMBH26109.5°109.5°
H25CMBH27109.5°109.4°
H26CMBH27109.4°109.5°
H28CMCH29109.5°109.4°
H28CMCH30109.5°109.5°
H29CMCH30109.4°109.5°
H31CMDH32109.5°109.5°
H31CMDH33109.5°109.5°
H32CMDH33109.5°109.5°
H37CHAH38109.4°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O1DCGDO2DCBD178.8°180.0°
O1DCGDCBDCAD41.5°0.0°
O1DCGDCBDH16161.5°119.9°
O1DCGDCBDH1778.4°119.9°
O1DCGDO2DH400.0°0.0°
O2DCGDCBDCAD139.6°180.0°
O2DCGDCBDH1619.7°60.1°
O2DCGDCBDH17100.4°60.0°
CGDCBDCADH16119.9°119.9°
CGDCBDCADH17120.0°120.0°
CGDCBDCADC3D172.6°180.0°
CGDCBDCADH752.0°60.0°
CGDCBDCADH866.8°60.0°
CGDCBDH16H17120.2°120.1°
CBDCGDO2DH40178.9°180.0°
CAACBACGAH9119.8°120.0°
CAACBACGAH10119.8°120.0°
CAACBACGAO2A99.8°0.0°
CBACAAC2AH2119.8°120.0°
CBACAAC2AH3119.8°120.0°
CAACBACGAO1A80.3°180.0°
CBACAAC2AC3A35.1°90.0°
CBACAAC2AC1A145.4°90.0°
CBACAAH2H3120.7°120.0°
CAACBAH9H10120.6°120.0°
CBACGAO2AO1A180.0°180.0°
CGACBACAAC2A109.4°180.0°
CGACBACAAH210.3°60.0°
CGACBACAAH3130.8°60.0°
CGACBAH9H10120.7°120.0°
CBACGAO1AH39180.0°180.0°
O2ACGACBAH9140.4°120.0°
O2ACGACBAH1020.0°120.1°
O2ACGAO1AH390.0°0.0°
CAAC2AC3ACMA0.1°0.0°
CAAC2AC3AC1A179.5°179.9°
CAAC2AC3AC4A178.8°180.0°
CAAC2AC1ACHA1.4°0.1°
CAAC2AC1ANA179.9°179.8°
C2ACAAH2H3120.6°120.0°
C2ACAACBAH910.4°60.0°
C2ACAACBAH10130.8°60.0°
CBDCADC3DH7120.6°120.1°
CBDCADC3DH8120.6°120.0°
CBDCADC3DC2D52.2°90.0°
CBDCADC3DC4D131.2°90.0°
CBDCADH7H8118.1°120.0°
CADCBDH16H17120.2°120.0°
CADC3DC2DCMD1.6°0.0°
CADC3DC2DC4D177.0°180.0°
CADC3DC2DC1D178.6°180.0°
CADC3DC4DCHA4.6°0.0°
CADC3DC4DND179.5°180.0°
C3DCADH7H8118.1°119.9°
C3DCADCBDH1667.5°60.0°
C3DCADCBDH1752.6°60.1°
CMAC3AC2AC4A178.8°180.0°
CMAC3AC2AC1A179.6°180.0°
CMAC3AC4ACHB2.6°0.1°
CMAC3AC4ANA179.4°179.8°
C3ACMAH22H23120.0°120.0°
C3ACMAH22H24120.0°120.0°
C3ACMAH23H24120.0°120.0°
O1ACGACBAH939.5°60.0°
O1ACGACBAH10160.0°60.0°
CMDC2DC3DC1D179.9°180.0°
CMDC2DC3DC4D178.6°180.0°
CMDC2DC1DND180.0°180.0°
CMDC2DC1DCHD0.2°0.3°
C2DCMDH31H32120.0°120.1°
C2DCMDH31H33120.0°120.0°
C2DCMDH32H33120.0°120.0°
C3AC2AC1ACHA179.1°180.0°
C3AC2AC1ANA0.6°0.3°
C2AC3AC4ACHB178.6°180.0°
C2AC3AC4ANA1.8°0.3°
C3AC2ACAAH2154.9°150.0°
C3AC2ACAAH384.7°30.1°
C2AC3ACMAH2290.7°90.0°
C2AC3ACMAH23149.4°150.0°
C2AC3ACMAH2429.4°30.0°
C1AC2AC3AC4A0.7°0.0°
C2AC1ACHANA178.1°179.6°
C2AC1ANAC4A1.7°0.5°
C2AC1ACHAC4D127.1°85.3°
C1AC2ACAAH225.7°30.1°
C1AC2ACAAH394.8°150.0°
C2AC1ANAH34178.3°179.7°
C2AC1ACHAH37109.0°154.7°
C2AC1ACHAH383.2°34.7°
C3AC4ANAC1A2.1°0.5°
C3AC4ACHBNA176.0°179.7°
C3AC4ACHBC1B49.8°85.0°
C3AC4ACHBH18171.5°35.0°
C3AC4ACHBH1972.0°155.0°
C4AC3ACMAH2290.7°90.0°
C4AC3ACMAH2329.2°30.0°
C4AC3ACMAH24149.2°150.0°
C3AC4ANAH34177.9°179.7°
C2DC3DC4DCHA178.3°180.0°
C2DC3DC4DND2.3°0.0°
C3DC2DC1DND0.1°0.0°
C3DC2DC1DCHD179.9°179.8°
C2DC3DCADH768.4°149.9°
C2DC3DCADH8172.8°30.0°
C3DC2DCMDH3190.1°90.0°
C3DC2DCMDH32149.9°30.0°
C3DC2DCMDH3329.9°150.0°
C4DC3DC2DC1D1.5°0.0°
C3DC4DCHAC1A122.0°85.0°
C3DC4DCHAND175.0°180.0°
C3DC4DNDC1D2.2°0.0°
C4DC3DCADH7108.2°30.0°
C4DC3DCADH810.6°150.0°
C3DC4DNDH36177.8°179.7°
C3DC4DCHAH37114.1°35.0°
C3DC4DCHAH381.8°155.0°
C2DC1DNDC4D1.4°0.0°
C2DC1DNDCHD179.8°179.7°
C2DC1DCHDC4C168.1°84.7°
C2DC1DCHDH2071.1°155.3°
C2DC1DCHDH2147.3°35.3°
C1DC2DCMDH3190.1°90.0°
C1DC2DCMDH3229.9°150.0°
C1DC2DCMDH33149.9°30.0°
C2DC1DNDH36178.6°179.7°
NBC4BOBC3B179.6°179.8°
C4BNBC1BCHB176.9°179.8°
C4BNBC1BC2B1.3°0.4°
NBC4BC3BC2B0.1°0.2°
NBC4BC3BCAB179.4°179.8°
NBC1BCHBC4A61.5°0.3°
C1BNBC4BOB178.9°179.8°
NBC1BCHBC2B174.7°179.7°
C1BNBC4BC3B0.8°0.4°
NBC1BC2BC3B1.4°0.2°
NBC1BC2BCMB179.4°179.7°
NBC1BCHBH18176.8°120.3°
NBC1BCHBH1960.3°119.7°
CHAC1ANAC4A180.0°179.9°
C1ACHAC4DH37123.9°119.9°
C1ACHAC4DH38123.9°120.0°
C1ACHAC4DND62.9°95.1°
CHAC1ANAH340.1°0.0°
C1ACHAH37H38105.2°120.0°
C1ANAC4ACHB178.7°179.8°
C1ANAC4AH34180.0°179.8°
NAC1ACHAC4D54.8°95.0°
NAC1ACHAH3769.0°24.9°
NAC1ACHAH38178.7°145.0°
C4ACHBC1BH18121.8°120.0°
C4ACHBC1BH19121.8°120.0°
C4ACHBC1BC2B113.2°180.0°
C4ACHBH18H19114.4°120.0°
CHBC4ANAH341.3°0.0°
NAC4ACHBC1B126.3°94.7°
NAC4ACHBH184.5°145.3°
NAC4ACHBH19112.0°25.3°
OBC4BC3BC2B179.8°180.0°
OBC4BC3BCAB0.9°0.0°
CHAC4DNDC1D178.0°180.0°
CHAC4DNDH362.0°0.2°
C4DCHAH37H38105.2°120.0°
C4DNDC1DH36180.0°179.7°
C4DNDC1DCHD178.5°179.7°
NDC4DCHAH3760.9°145.0°
NDC4DCHAH38173.2°24.9°
CHBC1BC2BC3B177.0°180.0°
CHBC1BC2BCMB3.9°0.0°
C1BCHBH18H19114.3°120.0°
C4BC3BC2BC1B1.0°0.0°
C4BC3BC2BCAB179.3°180.0°
C4BC3BC2BCMB179.9°180.0°
C4BC3BCABCBB58.7°0.0°
C4BC3BCABH4121.3°180.0°
C1BC2BC3BCMB179.0°180.0°
C1BC2BC3BCAB179.7°180.0°
C2BC1BCHBH188.5°60.0°
C2BC1BCHBH19125.0°60.0°
C1BC2BCMBH25180.0°90.0°
C1BC2BCMBH2660.0°150.0°
C1BC2BCMBH2760.0°30.0°
NDC1DCHDC4C11.7°95.0°
NDC1DCHDH20109.1°25.0°
NDC1DCHDH21132.5°145.0°
C1DCHDC4CH20120.8°120.0°
C1DCHDC4CH21120.8°120.0°
C1DCHDC4CNC12.9°84.9°
C1DCHDC4CC3C165.7°94.5°
C1DCHDH20H21117.6°119.9°
CHDC1DNDH361.5°0.0°
CHDC4CNCC3C179.0°179.5°
CHDC4CNCC1C179.5°180.0°
CHDC4CC3CCAC2.4°0.3°
CHDC4CC3CC2C179.8°179.8°
C4CCHDH20H21117.5°120.1°
CHDC4CNCH350.5°0.5°
C2BC3BCABCBB120.5°180.0°
C2BC3BCABH459.5°0.0°
C3BC2BCMBH251.1°90.1°
C3BC2BCMBH26121.1°30.0°
C3BC2BCMBH27118.9°150.0°
CABC3BC2BCMB0.7°0.0°
C3BCABCBBH4180.0°180.0°
C3BCABCBBH11180.0°0.0°
C3BCABCBBH120.0°180.0°
C2BCMBH25H26120.0°120.0°
C2BCMBH25H27120.0°120.0°
C2BCMBH26H27120.0°120.0°
C4CNCC1CH35180.0°179.5°
NCC4CC3CCAC178.7°179.8°
NCC4CC3CC2C1.3°0.3°
C4CNCC1CC2C0.5°0.4°
C4CNCC1COC179.1°179.9°
NCC4CCHDH20107.9°155.1°
NCC4CCHDH21133.8°35.1°
C3CC4CNCC1C0.5°0.5°
C4CC3CCACC2C177.2°179.9°
C4CC3CCACCBC155.4°94.9°
C4CC3CC2CC1C1.7°0.0°
C4CC3CC2CCMC112.2°118.6°
C4CC3CC2CH1125.4°118.6°
C4CC3CCACH534.6°145.0°
C4CC3CCACH683.8°25.1°
C3CC4CCHDH2073.5°25.5°
C3CC4CCHDH2144.9°145.5°
C3CC4CNCH35179.5°180.0°
NCC1CC2CC3C1.3°0.2°
NCC1CC2COC178.6°179.7°
NCC1CC2CCMC113.6°118.3°
NCC1CC2CH1124.6°119.0°
C3CCACCBCH5120.8°120.0°
C3CCACCBCH6120.8°120.0°
CACC3CC2CC1C179.3°179.9°
CACC3CC2CCMC65.4°61.5°
CACC3CC2CH157.0°61.3°
C3CCACH5H6117.6°120.0°
C3CCACCBCH13180.0°180.0°
C3CCACCBCH1460.0°60.0°
C3CCACCBCH1560.0°59.9°
CBCCACC3CC2C21.8°84.9°
CBCCACH5H6117.6°120.0°
CACCBCH13H14120.0°120.0°
CACCBCH13H15120.0°120.0°
CACCBCH14H15120.0°119.9°
CABCBBH11H12180.0°179.9°
C3CC2CC1CCMC114.9°118.5°
C3CC2CC1CH1123.4°118.7°
C3CC2CC1COC179.9°179.9°
C3CC2CCMCH1122.4°123.0°
C2CC3CCACH5142.5°35.1°
C2CC3CCACH699.0°155.0°
C3CC2CCMCH28180.0°55.7°
C3CC2CCMCH2960.0°64.3°
C3CC2CCMCH3060.0°175.7°
C1CC2CCMCH1122.2°122.8°
C1CC2CCMCH2864.6°58.6°
C1CC2CCMCH2955.4°178.5°
C1CC2CCMCH30175.3°61.4°
C2CC1CNCH35179.5°179.9°
OCC1CC2CCMC65.1°61.4°
OCC1CC2CH156.7°61.3°
OCC1CNCH350.9°0.4°
C2CCMCH28H29120.0°120.0°
C2CCMCH28H30120.0°120.0°
C2CCMCH29H30120.0°120.0°
H1C2CCMCH2857.6°178.6°
H1C2CCMCH29177.6°58.7°
H1C2CCMCH3062.5°61.4°
H2CAACBAH9130.1°180.0°
H2CAACBAH10109.5°60.0°
H3CAACBAH9109.4°60.0°
H3CAACBAH1011.0°180.0°
H4CABCBBH110.0°180.0°
H4CABCBBH12180.0°0.0°
H5CACCBCH1359.3°60.0°
H5CACCBCH14179.2°180.0°
H5CACCBCH1560.7°60.1°
H6CACCBCH1359.2°60.0°
H6CACCBCH1460.8°60.1°
H6CACCBCH15179.2°180.0°
H7CADCBDH16171.9°179.9°
H7CADCBDH1768.0°60.0°
H8CADCBDH1653.1°60.0°
H8CADCBDH17173.2°180.0°
H13CBCH14H15120.0°120.1°
H22CMAH23H24120.0°119.9°
H25CMBH26H27120.0°120.0°
H28CMCH29H30120.0°120.0°
H31CMDH32H33120.0°120.0°

222415

PDB entries from 2024-07-10

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