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VHD

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1C2sing1.53Å1.53Å
C2C3sing1.53Å1.54Å
C2C4sing1.51Å1.52Å
C4C5sing1.38Å1.40ÅAromatic
C4C21doub1.39Å1.42ÅAromatic
C5C6doub1.40Å1.40ÅAromatic
C6C7sing1.47Å1.50Å
C6C18sing1.40Å1.41ÅAromatic
C7O8doub1.22Å1.22Å
C7N9sing1.35Å1.38Å
N9C10sing1.47Å1.48Å
N9C17sing1.47Å1.47Å
C10C11sing1.51Å1.51Å
C11C12sing1.38Å1.39ÅAromatic
C11C16doub1.38Å1.40ÅAromatic
C12C13doub1.38Å1.38ÅAromatic
C13C14sing1.38Å1.38ÅAromatic
C14C15doub1.38Å1.39ÅAromatic
C15C16sing1.39Å1.39ÅAromatic
C16C17sing1.51Å1.50Å
C18O19sing1.36Å1.37Å
C18C20doub1.38Å1.39ÅAromatic
C20C21sing1.39Å1.39ÅAromatic
C21O22sing1.36Å1.36Å
C1H11Csing1.09Å1.10Å
C1H12Csing1.09Å1.10Å
C1H13Csing1.09Å1.10Å
C2H2sing1.09Å1.10Å
C3H31Csing1.09Å1.10Å
C3H32Csing1.09Å1.10Å
C3H33Csing1.09Å1.10Å
C5H5sing1.08Å1.08Å
C10H101sing1.09Å1.10Å
C10H102sing1.09Å1.10Å
C17H171sing1.09Å1.10Å
C17H172sing1.09Å1.10Å
C12H12sing1.08Å1.08Å
C13H13sing1.08Å1.08Å
C14H14sing1.08Å1.08Å
C15H15sing1.08Å1.08Å
O19H19sing0.97Å0.95Å
C20H20sing1.08Å1.08Å
O22H22sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C1C2C3109.9°109.5°
C1C2C4110.2°109.4°
C2C1H11C109.5°109.5°
C2C1H12C109.5°109.5°
C2C1H13C109.5°109.5°
C1C2H2109.9°109.5°
C3C2C4112.8°109.5°
C3C2H2107.1°109.5°
C2C3H31C109.5°109.5°
C2C3H32C109.5°109.4°
C2C3H33C109.5°109.4°
C2C4C5120.1°119.9°
C2C4C21121.2°119.9°
C4C2H2106.8°109.5°
C5C4C21118.5°120.3°
C4C5C6121.0°119.9°
C4C5H5119.5°120.0°
C4C21C20120.5°120.3°
C4C21O22121.0°119.9°
C5C6C7120.3°120.1°
C5C6C18119.3°119.8°
C6C5H5119.5°120.0°
C7C6C18120.2°120.1°
C6C7O8120.3°120.1°
C6C7N9117.7°120.0°
C6C18O19119.7°120.1°
C6C18C20120.4°119.7°
O8C7N9121.8°120.0°
C7N9C10124.1°126.6°
C7N9C17123.5°126.6°
C10N9C17112.3°106.9°
N9C10C11102.3°107.7°
N9C10H101111.9°109.8°
N9C10H102113.5°109.8°
N9C17C16102.5°107.6°
N9C17H171111.9°109.8°
N9C17H172113.3°109.8°
C10C11C12130.0°131.2°
C10C11C16110.4°108.9°
C11C10H101111.9°109.9°
C11C10H102113.4°109.9°
C12C11C16119.5°120.0°
C11C12C13120.2°120.1°
C11C12H12119.9°120.0°
C11C16C15119.8°119.9°
C11C16C17110.6°108.9°
C12C13C14120.2°120.0°
C13C12H12119.9°119.9°
C12C13H13119.9°120.0°
C13C14C15120.2°119.9°
C14C13H13119.9°120.0°
C13C14H14119.9°120.0°
C14C15C16120.1°120.1°
C15C14H14119.9°120.0°
C14C15H15120.0°120.0°
C15C16C17129.7°131.2°
C16C15H15120.0°119.9°
C16C17H171111.9°109.9°
C16C17H172113.3°109.7°
O19C18C20119.9°120.1°
C18O19H19109.5°114.0°
C18C20C21120.4°120.0°
C18C20H20119.8°120.0°
C20C21O22118.5°119.8°
C21C20H20119.8°120.0°
C21O22H22109.5°114.0°
H11CC1H12C109.4°109.4°
H11CC1H13C109.4°109.5°
H12CC1H13C109.5°109.5°
H31CC3H32C109.5°109.5°
H31CC3H33C109.5°109.5°
H32CC3H33C109.5°109.5°
H101C10H102104.1°109.8°
H171C17H172104.2°109.9°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C1C2C3C4123.5°119.9°
C1C2C3H2119.3°120.0°
C1C2C4H2119.3°120.0°
C1C2C4C581.4°60.0°
C1C2C4C2193.0°119.7°
C2C1H11CH12C120.0°120.0°
C2C1H11CH13C120.0°120.0°
C2C1H12CH13C120.0°120.0°
C1C2C3H31C71.9°60.0°
C1C2C3H32C168.1°180.0°
C1C2C3H33C48.1°60.0°
C3C2C4H2117.4°120.0°
C3C2C4C541.9°60.0°
C3C2C4C21143.7°120.3°
C3C2C1H11C122.2°60.1°
C3C2C1H12C117.8°180.0°
C3C2C1H13C2.3°59.9°
C2C3H31CH32C120.0°120.0°
C2C3H31CH33C120.0°120.0°
C2C3H32CH33C120.0°119.9°
C2C4C5C21174.5°179.8°
C2C4C5C6175.0°180.0°
C2C4C21C20175.6°179.7°
C2C4C21O226.8°0.1°
C4C2C1H11C112.8°180.0°
C4C2C1H12C7.2°60.0°
C4C2C1H13C127.2°60.0°
C4C2C3H31C51.6°60.0°
C4C2C3H32C68.4°60.1°
C4C2C3H33C171.6°180.0°
C2C4C5H55.0°0.0°
C4C5C6H5180.0°180.0°
C4C5C6C7176.8°180.0°
C4C5C6C181.0°0.0°
C5C4C21C201.2°0.5°
C5C4C21O22178.7°179.7°
C5C4C2H2159.3°180.0°
C21C4C5C60.4°0.3°
C4C21C20C180.5°0.5°
C4C21C20O22177.6°179.8°
C21C4C2H226.3°0.2°
C21C4C5H5179.6°179.8°
C4C21C20H20179.6°179.7°
C4C21O22H2297.6°90.0°
C5C6C7C18175.8°179.9°
C5C6C7O8112.4°136.0°
C5C6C7N971.7°43.9°
C5C6C18O19178.9°180.0°
C5C6C18C201.7°0.0°
C6C7O8N9175.7°180.0°
C6C7N9C10178.7°174.7°
C6C7N9C174.0°5.0°
C7C6C18O193.0°0.0°
C7C6C18C20177.5°180.0°
C7C6C5H53.2°0.1°
C18C6C7O871.8°44.0°
C18C6C7N9104.1°136.0°
C6C18O19C20179.5°180.0°
C6C18C20C210.9°0.3°
C18C6C5H5179.0°180.0°
C6C18O19H19161.9°90.1°
C6C18C20H20179.0°180.0°
O8C7N9C105.4°5.3°
O8C7N9C17171.8°175.0°
C7N9C10C17177.5°179.7°
C7N9C10C11164.1°180.0°
C7N9C17C16163.7°179.8°
C7N9C10H10175.9°60.4°
C7N9C10H10241.6°60.4°
C7N9C17H17143.7°60.5°
C7N9C17H17273.8°60.5°
N9C10C11H101120.0°119.5°
N9C10C11H102122.6°119.6°
N9C10C11C12172.2°180.0°
N9C10C11C167.4°0.0°
C10N9C17C1613.8°0.4°
N9C10H101H102122.9°120.8°
C10N9C17H171133.9°119.3°
C10N9C17H172108.7°119.8°
C17N9C10C1113.4°0.3°
N9C17C16C118.7°0.4°
N9C17C16C15172.3°179.9°
N9C17C16H171120.0°119.6°
N9C17C16H172122.5°119.5°
C17N9C10H101106.6°119.9°
C17N9C10H102135.9°119.3°
N9C17H171H172122.8°120.9°
C10C11C12C16179.6°180.0°
C10C11C12C13179.7°180.0°
C10C11C16C15179.9°180.0°
C10C11C16C170.8°0.3°
C11C10H101H102122.9°121.0°
C10C11C12H120.3°0.0°
C11C12C13H12180.0°180.0°
C11C12C13C140.1°0.0°
C12C11C16C150.4°0.0°
C12C11C16C17179.5°179.8°
C12C11C10H10167.8°60.5°
C12C11C10H10249.6°60.5°
C11C12C13H13180.0°180.0°
C16C11C12C130.1°0.0°
C11C16C15C140.6°0.0°
C11C16C15C17178.9°179.7°
C16C11C10H101112.6°119.5°
C16C11C10H102130.0°119.5°
C11C16C17H171128.7°119.2°
C11C16C17H172113.8°119.9°
C16C11C12H12179.9°180.0°
C11C16C15H15179.5°180.0°
C12C13C14H13180.0°180.0°
C12C13C14C150.1°0.0°
C12C13C14H14179.9°179.9°
C13C14C15H14180.0°179.9°
C13C14C15C160.4°0.0°
C14C13C12H12179.9°180.0°
C13C14C15H15179.7°180.0°
C14C15C16H15180.0°180.0°
C14C15C16C17179.4°179.7°
C15C14C13H13179.9°179.9°
C15C16C17H17152.3°60.5°
C15C16C17H17265.2°60.4°
C16C15C14H14179.6°179.9°
C16C17H171H172122.8°120.8°
C17C16C15H150.6°0.3°
O19C18C20C21179.6°179.7°
O19C18C20H200.5°0.0°
C18C20C21H20180.0°179.7°
C18C20C21O22178.1°179.7°
C20C18O19H1918.6°89.9°
C20C21O22H2280.1°89.8°
O22C21C20H201.9°0.0°
H11CC1H12CH13C119.9°120.0°
H11CC1C2H24.6°60.0°
H12CC1C2H2124.6°60.0°
H13CC1C2H2115.3°180.0°
H2C2C3H31C168.8°180.0°
H2C2C3H32C48.8°60.0°
H2C2C3H33C71.2°60.0°
H31CC3H32CH33C120.0°120.0°
H12C12C13H130.0°0.0°
H13C13C14H140.1°0.0°
H14C14C15H150.3°0.1°

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PDB entries from 2024-07-10

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