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SummaryGeometryRelated PDB entries

VFY

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
C04O03sing0.00Å1.40Å
O03C02sing0.00Å1.40Å
F24C22sing0.00Å1.36Å
F25C22sing0.00Å1.36Å
C20C19doub0.00Å1.38ÅAromatic
C20C21sing0.00Å1.38ÅAromatic
C22C21sing0.00Å1.53Å
C22F23sing0.00Å1.36Å
C02O01doub0.00Å1.18Å
C02C05sing0.00Å1.53Å
C19C18sing0.00Å1.38ÅAromatic
C21C16doub0.00Å1.39ÅAromatic
C18C17doub0.00Å1.39ÅAromatic
C16C17sing0.00Å1.38ÅAromatic
C16C15sing0.00Å1.54Å
C05C15sing0.00Å1.54Å
C05C06doub0.00Å1.53Å
C15C11sing0.00Å1.53Å
C07C06sing0.00Å1.53Å
C06N08sing0.00Å1.45Å
O13N12sing0.00Å1.40Å
C11N12sing0.00Å1.45Å
C11C09doub0.00Å1.52Å
N08C09sing0.00Å1.44Å
N12O14doub0.00Å1.17Å
C09C10sing0.00Å1.53Å
C10H1sing0.00Å1.10Å
C10H2sing0.00Å1.10Å
C10H3sing0.00Å1.10Å
C15H4sing0.00Å1.10Å
C17H5sing0.00Å1.08Å
C20H6sing0.00Å1.08Å
C04H7sing0.00Å1.10Å
C04H8sing0.00Å1.10Å
C04H9sing0.00Å1.10Å
C07H12sing0.00Å1.10Å
C07H13sing0.00Å1.10Å
C07H14sing0.00Å1.10Å
C18H17sing0.00Å1.08Å
C19H18sing0.00Å1.08Å
N08H19sing0.00Å1.00Å
O13H10sing0.00Å275.72Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
C04O03C02113.6°90.0°
O03C04H7109.5°90.0°
O03C04H8109.4°90.0°
O03C04H9109.4°90.0°
O03C02O01120.0°90.0°
O03C02C05120.1°90.0°
F24C22F25109.3°90.0°
F24C22C21109.2°90.0°
F24C22F23109.7°90.0°
F25C22C21109.9°90.0°
F25C22F23109.4°90.0°
C19C20C21119.9°90.0°
C20C19C18119.9°90.0°
C19C20H6120.0°90.0°
C20C19H18120.0°90.0°
C20C21C22120.0°90.0°
C20C21C16120.1°90.0°
C21C20H6120.0°90.0°
C21C22F23109.4°90.0°
C22C21C16119.9°90.0°
O01C02C05119.9°90.0°
C02C05C15118.2°90.0°
C02C05C06119.6°90.0°
C19C18C17120.2°90.0°
C19C18H17119.9°90.0°
C18C19H18120.1°90.0°
C21C16C17120.0°90.0°
C21C16C15119.6°90.0°
C18C17C16119.9°90.0°
C18C17H5120.1°90.0°
C17C18H17119.9°90.0°
C17C16C15120.4°90.0°
C16C17H5120.0°90.0°
C16C15C05108.6°90.0°
C16C15C11109.5°90.0°
C16C15H4108.3°90.0°
C15C05C06118.6°90.0°
C05C15C11113.5°90.0°
C05C15H4108.3°90.0°
C05C06C07119.3°90.0°
C05C06N08118.0°90.0°
C15C11N12118.1°90.0°
C15C11C09120.1°90.0°
C11C15H4108.4°90.0°
C07C06N08119.3°90.0°
C06C07H12109.5°90.0°
C06C07H13109.4°90.0°
C06C07H14109.5°90.0°
C06N08C09119.5°90.0°
C06N08H19120.2°90.0°
O13N12C11119.6°90.0°
O13N12O14120.0°90.0°
N12O13H1088.8°90.0°
N12C11C09119.3°90.0°
C11N12O14120.3°90.0°
C11C09N08120.4°90.0°
C11C09C10119.8°90.0°
N08C09C10119.8°90.0°
C09N08H19120.3°90.0°
C09C10H1109.5°90.0°
C09C10H2109.5°90.0°
C09C10H3109.5°90.0°
H1C10H2109.4°90.0°
H1C10H3109.5°90.0°
H2C10H3109.5°90.0°
H7C04H8109.5°90.0°
H7C04H9109.5°90.0°
H8C04H9109.5°90.0°
H12C07H13109.4°90.0°
H12C07H14109.5°90.0°
H13C07H14109.5°90.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
C04O03C02O0161.7°90.0°
C04O03C02C05117.8°90.0°
O03C04H7H8120.0°90.0°
O03C04H7H9120.0°90.0°
O03C04H8H9120.0°90.0°
O03C02O01C05179.5°90.0°
O03C02C05C1587.6°90.0°
O03C02C05C06114.1°90.0°
C02O03C04H7180.0°90.0°
C02O03C04H860.0°90.0°
C02O03C04H960.0°90.0°
F24C22F25C21119.8°90.0°
F24C22F25F23120.1°90.0°
F24C22C21C2015.0°90.0°
F24C22C21F23120.1°90.0°
F24C22C21C16165.2°90.0°
F25C22C21C20134.9°90.0°
F25C22C21F23120.1°90.0°
F25C22C21C1645.3°90.0°
C19C20C21H6180.0°90.0°
C19C20C21C22179.9°90.0°
C20C19C18H18180.0°90.0°
C19C20C21C160.1°90.0°
C20C19C18C170.1°90.0°
C20C19C18H17180.0°90.0°
C20C21C22C16179.9°90.0°
C20C21C22F23105.1°90.0°
C21C20C19C180.0°90.0°
C20C21C16C170.1°90.0°
C20C21C16C15179.9°90.0°
C21C20C19H18180.0°90.0°
C22C21C16C17180.0°90.0°
C22C21C16C150.2°90.0°
C22C21C20H60.1°90.0°
F23C22C21C1674.8°90.0°
O01C02C05C1591.9°90.0°
O01C02C05C0666.4°90.0°
C02C05C15C16107.6°90.0°
C02C05C15C06158.5°90.0°
C02C05C15C11130.3°90.0°
C02C05C06C0776.3°90.0°
C02C05C06N08124.9°90.0°
C02C05C15H49.8°90.0°
C19C18C17H17180.0°90.0°
C19C18C17C160.0°90.0°
C19C18C17H5180.0°90.0°
C18C19C20H6180.0°90.0°
C21C16C17C180.1°90.0°
C21C16C17C15179.8°90.0°
C21C16C15C05120.5°90.0°
C21C16C15C11115.0°90.0°
C21C16C15H43.0°90.0°
C21C16C17H5179.9°90.0°
C16C21C20H6179.9°90.0°
C18C17C16H5180.0°90.0°
C18C17C16C15179.9°90.0°
C17C18C19H18179.9°90.0°
C17C16C15C0559.3°90.0°
C17C16C15C1165.2°90.0°
C17C16C15H4176.8°90.0°
C16C17C18H17180.0°90.0°
C16C15C05C11122.1°90.0°
C16C15C05H4117.5°90.0°
C16C15C05C0693.8°90.0°
C16C15C11H4118.0°90.0°
C16C15C11N1296.4°90.0°
C16C15C11C09101.7°90.0°
C15C16C17H50.1°90.0°
C05C15C11H4120.4°90.0°
C15C05C06C07125.5°90.0°
C15C05C06N0833.3°90.0°
C05C15C11N12142.0°90.0°
C05C15C11C0919.9°90.0°
C06C05C15C1128.2°90.0°
C05C06C07N08158.5°90.0°
C05C06N08C0928.2°90.0°
C06C05C15H4148.7°90.0°
C05C06C07H12180.0°90.0°
C05C06C07H1360.0°90.0°
C05C06C07H1460.0°90.0°
C05C06N08H19151.8°90.0°
C15C11N12O133.1°90.0°
C15C11N12C09162.0°90.0°
C15C11C09N0816.0°90.0°
C15C11N12O14176.7°90.0°
C15C11C09C10167.5°90.0°
C07C06N08C09130.6°90.0°
C06C07H12H13120.0°90.0°
C06C07H12H14120.0°90.0°
C06C07H13H14120.0°90.0°
C07C06N08H1949.4°90.0°
C06N08C09C1119.8°90.0°
C06N08C09H19180.0°90.0°
C06N08C09C10163.7°90.0°
N08C06C07H1221.5°90.0°
N08C06C07H1398.5°90.0°
N08C06C07H14141.5°90.0°
O13N12C11O14179.9°90.0°
O13N12C11C09165.1°90.0°
N12C11C09N08145.6°90.0°
N12C11C09C1030.9°90.0°
N12C11C15H421.5°90.0°
C11N12O13H1038.1°90.0°
C11C09N08C10176.4°90.0°
C09C11N12O1414.8°90.0°
C11C09C10H1180.0°90.0°
C11C09C10H260.0°90.0°
C11C09C10H360.0°90.0°
C09C11C15H4140.3°90.0°
C11C09N08H19160.2°90.0°
N08C09C10H13.5°90.0°
N08C09C10H2116.5°90.0°
N08C09C10H3123.5°90.0°
O14N12O13H10142.1°90.0°
C09C10H1H2120.0°90.0°
C09C10H1H3120.0°90.0°
C09C10H2H3120.0°90.0°
C10C09N08H1916.3°90.0°
H1C10H2H3120.0°90.0°
H5C17C18H170.0°90.0°
H6C20C19H180.0°90.0°
H7C04H8H9120.0°90.0°
H12C07H13H14120.0°90.0°
H17C18C19H180.1°90.0°

247536

PDB entries from 2026-01-14

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