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VFD

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
CBJCBKdoub1.38Å1.39ÅAromatic
CBJCBIsing1.38Å1.39ÅAromatic
CBKCBLsing1.38Å1.39ÅAromatic
CBICBHdoub1.38Å1.39ÅAromatic
CBLCBGdoub1.38Å1.40ÅAromatic
CBHCBGsing1.38Å1.40ÅAromatic
CBGCBFsing1.51Å1.51Å
CAYCAZdoub1.38Å1.39ÅAromatic
CAYCAXsing1.38Å1.39ÅAromatic
CAZCBAsing1.38Å1.39ÅAromatic
CAXCAWdoub1.38Å1.40ÅAromatic
OCdoub1.21Å1.26Å
CBFOBEsing1.43Å1.44Å
OBECD1sing1.36Å1.40Å
CCAsing1.51Å1.55Å
COXXsing1.34Å1.27Å
CBCAsing1.53Å1.53Å
CBCGsing1.51Å1.51Å
CBACBBdoub1.38Å1.39ÅAromatic
CANsing1.47Å1.48Å
CAWCBBsing1.38Å1.40ÅAromatic
CAWCAPsing1.51Å1.53Å
CD1CGdoub1.39Å1.40ÅAromatic
CD1CACsing1.39Å1.40ÅAromatic
CAVCAUdoub1.38Å1.39ÅAromatic
CAVCAQsing1.38Å1.40ÅAromatic
CGCD2sing1.38Å1.40ÅAromatic
CAPCAQsing1.51Å1.52Å
CAPCANsing1.51Å1.54Å
CAUCATsing1.38Å1.39ÅAromatic
OABCACsing1.36Å1.41Å
OABCAAsing1.43Å1.44Å
CAQCARdoub1.38Å1.41ÅAromatic
NCANsing1.35Å1.41Å
NCAGsing1.47Å1.47Å
CACCBDdoub1.39Å1.40ÅAromatic
CANOAOdoub1.21Å1.23Å
CD2CAGsing1.51Å1.50Å
CD2CBCdoub1.39Å1.40ÅAromatic
CATCASdoub1.38Å1.39ÅAromatic
CARCASsing1.38Å1.39ÅAromatic
CBDCBCsing1.38Å1.39ÅAromatic
CAH1sing1.09Å1.10Å
CBH2sing1.09Å1.10Å
CBH3sing1.09Å1.10Å
CAAH4sing1.09Å1.10Å
CAAH5sing1.09Å1.10Å
CAAH6sing1.09Å1.10Å
CAGH7sing1.09Å1.10Å
CAGH8sing1.09Å1.10Å
CAPH9sing1.09Å1.10Å
CARH10sing1.08Å1.08Å
CASH11sing1.08Å1.08Å
CATH12sing1.08Å1.08Å
CAUH13sing1.08Å1.08Å
CAVH14sing1.08Å1.08Å
CAXH15sing1.08Å1.08Å
CAYH16sing1.08Å1.08Å
CAZH17sing1.08Å1.08Å
CBAH18sing1.08Å1.08Å
CBBH19sing1.08Å1.08Å
CBCH20sing1.08Å1.08Å
CBDH21sing1.08Å1.08Å
CBFH22sing1.09Å1.10Å
CBFH23sing1.09Å1.10Å
CBHH24sing1.08Å1.08Å
CBIH25sing1.08Å1.08Å
CBJH26sing1.08Å1.08Å
CBKH27sing1.08Å1.08Å
CBLH28sing1.08Å1.08Å
OXXH29sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
CBKCBJCBI119.8°120.0°
CBJCBKCBL120.1°120.0°
CBKCBJH26120.1°120.0°
CBJCBKH27120.0°120.0°
CBJCBICBH120.1°120.0°
CBJCBIH25119.9°120.0°
CBICBJH26120.1°120.0°
CBKCBLCBG120.7°120.0°
CBLCBKH27120.0°120.0°
CBKCBLH28119.6°120.0°
CBICBHCBG120.5°120.0°
CBICBHH24119.7°120.0°
CBHCBIH25119.9°120.0°
CBLCBGCBH118.7°120.0°
CBLCBGCBF120.6°120.0°
CBGCBLH28119.6°120.0°
CBHCBGCBF120.7°120.0°
CBGCBHH24119.7°120.0°
CBGCBFOBE109.4°109.4°
CBGCBFH22109.5°109.4°
CBGCBFH23109.5°109.5°
CAZCAYCAX119.9°120.0°
CAYCAZCBA119.8°120.0°
CAZCAYH16120.1°120.0°
CAYCAZH17120.1°120.0°
CAYCAXCAW121.5°120.0°
CAYCAXH15119.3°120.0°
CAXCAYH16120.1°120.0°
CAZCBACBB120.4°120.0°
CBACAZH17120.1°120.0°
CAZCBAH18119.8°120.0°
CAXCAWCBB117.8°120.0°
CAXCAWCAP118.5°120.0°
CAWCAXH15119.3°120.0°
OCCA117.7°120.0°
OCOXX128.3°120.0°
CBFOBECD1109.8°117.0°
OBECBFH22109.5°109.5°
OBECBFH23109.5°109.5°
OBECD1CG118.9°119.8°
OBECD1CAC119.0°119.8°
CACOXX114.0°120.0°
CCACB110.5°109.8°
CCAN111.5°109.8°
CCAH1107.2°109.8°
COXXH29109.5°117.0°
CACBCG116.2°110.8°
CBCAN111.9°107.9°
CBCAH1107.4°109.8°
CACBH2107.8°109.3°
CACBH3107.7°109.2°
CBCGCD1121.2°117.6°
CBCGCD2120.1°122.9°
CGCBH2107.7°109.2°
CGCBH3107.8°109.2°
CBACBBCAW120.7°120.0°
CBBCBAH18119.8°120.0°
CBACBBH19119.7°120.0°
CANCAN125.4°121.4°
CANCAG118.2°117.3°
NCAH1108.0°109.8°
CBBCAWCAP123.6°120.0°
CAWCBBH19119.7°120.0°
CAWCAPCAQ112.4°109.5°
CAWCAPCAN114.6°109.5°
CAWCAPH9104.8°109.5°
CGCD1CAC122.0°120.4°
CD1CGCD2118.8°119.5°
CD1CACOAB115.8°120.2°
CD1CACCBD118.3°119.7°
CAUCAVCAQ121.0°120.0°
CAVCAUCAT120.1°120.0°
CAVCAUH13120.0°120.0°
CAUCAVH14119.5°120.0°
CAVCAQCAP118.7°120.0°
CAVCAQCAR118.0°120.1°
CAQCAVH14119.5°120.0°
CGCD2CAG121.2°122.3°
CGCD2CBC119.5°120.0°
CAQCAPCAN114.0°109.5°
CAPCAQCAR123.4°119.9°
CAQCAPH9104.9°109.5°
CAPCANN118.5°120.0°
CAPCANOAO120.1°120.0°
CANCAPH9104.7°109.5°
CAUCATCAS119.9°120.0°
CAUCATH12120.0°120.0°
CATCAUH13119.9°120.0°
CACOABCAA117.5°117.0°
OABCACCBD125.9°120.2°
OABCAAH4109.5°109.5°
OABCAAH5109.4°109.5°
OABCAAH6109.5°109.5°
CAQCARCAS121.0°120.0°
CAQCARH10119.5°120.0°
CANNCAG116.4°121.3°
NCANOAO121.4°119.9°
NCAGCD2117.5°109.5°
NCAGH7107.4°109.4°
NCAGH8107.4°109.5°
CACCBDCBC120.1°119.7°
CACCBDH21120.0°120.1°
CAGCD2CBC119.3°117.7°
CD2CAGH7107.4°109.7°
CD2CAGH8107.4°109.4°
CD2CBCCBD121.3°120.7°
CD2CBCH20119.3°119.7°
CATCASCAR120.0°120.0°
CATCASH11120.0°120.0°
CASCATH12120.1°119.9°
CASCARH10119.5°120.0°
CARCASH11120.0°120.0°
CBDCBCH20119.3°119.6°
CBCCBDH21120.0°120.2°
H2CBH3109.5°109.2°
H4CAAH5109.5°109.4°
H4CAAH6109.5°109.4°
H5CAAH6109.5°109.5°
H7CAGH8109.5°109.4°
H22CBFH23109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
CBKCBJCBIH26180.0°179.8°
CBJCBKCBLH27180.0°179.8°
CBKCBJCBICBH0.1°0.1°
CBJCBKCBLCBG0.2°0.6°
CBKCBJCBIH25180.0°179.9°
CBJCBKCBLH28179.9°179.9°
CBICBJCBKCBL0.1°0.2°
CBJCBICBHH25180.0°180.0°
CBJCBICBHCBG0.1°0.0°
CBJCBICBHH24179.9°180.0°
CBICBJCBKH27179.9°180.0°
CBKCBLCBGH28180.0°179.3°
CBKCBLCBGCBH0.2°0.7°
CBKCBLCBGCBF179.7°179.7°
CBLCBKCBJH26179.9°179.9°
CBICBHCBGCBL0.2°0.4°
CBICBHCBGH24180.0°180.0°
CBICBHCBGCBF179.7°180.0°
CBHCBICBJH26180.0°179.8°
CBLCBGCBHCBF179.5°179.7°
CBLCBGCBFOBE145.1°90.3°
CBLCBGCBFH2295.0°29.7°
CBLCBGCBFH2325.1°149.6°
CBLCBGCBHH24179.8°179.7°
CBGCBLCBKH27179.8°179.6°
CBHCBGCBFOBE34.4°90.0°
CBHCBGCBFH2285.6°150.0°
CBHCBGCBFH23154.4°30.0°
CBGCBHCBIH25179.9°180.0°
CBHCBGCBLH28179.8°180.0°
CBGCBFOBEH22120.0°120.0°
CBGCBFOBEH23120.0°120.0°
CBGCBFOBECD1154.1°180.0°
CBGCBFH22H23120.0°120.0°
CBFCBGCBHH240.3°0.0°
CBFCBGCBLH280.3°0.4°
CAZCAYCAXH16180.0°179.9°
CAYCAZCBAH17180.0°179.9°
CAZCAYCAXCAW0.1°0.1°
CAYCAZCBACBB0.0°0.0°
CAZCAYCAXH15180.0°180.0°
CAYCAZCBAH18180.0°180.0°
CAXCAYCAZCBA0.0°0.0°
CAYCAXCAWH15180.0°179.9°
CAYCAXCAWCBB0.0°0.1°
CAYCAXCAWCAP179.9°179.8°
CAXCAYCAZH17180.0°180.0°
CAZCBACBBH18180.0°180.0°
CAZCBACBBCAW0.0°0.0°
CBACAZCAYH16180.0°180.0°
CAZCBACBBH19180.0°179.8°
CAXCAWCBBCBA0.0°0.0°
CAXCAWCBBCAP179.9°179.7°
CAXCAWCAPCAQ89.3°109.9°
CAXCAWCAPCAN138.3°130.1°
CAXCAWCAPH924.1°10.1°
CAWCAXCAYH16180.0°180.0°
CAXCAWCBBH19180.0°179.7°
OCCAOXX179.6°180.0°
OCCACB23.5°178.2°
OCCAN148.6°59.8°
OCCAH193.3°61.0°
OCOXXH290.0°0.1°
CBFOBECD1CG85.9°90.0°
CBFOBECD1CAC94.0°90.0°
OBECBFH22H23120.1°120.1°
OBECD1CGCB0.1°0.4°
OBECD1CGCAC179.9°180.0°
OBECD1CGCD2179.7°179.7°
OBECD1CACOAB0.1°0.0°
OBECD1CACCBD179.9°180.0°
CD1OBECBFH2234.1°60.0°
CD1OBECBFH2386.0°60.0°
CCACBN124.9°119.6°
CCACBH1116.7°120.8°
CCACBCG84.4°167.1°
CCANH1117.6°120.8°
CCANCAN98.3°4.0°
CCANCAG80.5°175.7°
CCACBH236.6°46.7°
CCACBH3154.6°72.6°
CACOXXH29179.5°179.9°
OXXCCACB156.9°1.8°
OXXCCAN31.8°120.2°
OXXCCAH186.3°119.0°
CACBCGH2121.0°120.4°
CACBCGH3121.0°120.3°
CBCANH1118.1°119.6°
CACBCGCD1160.5°160.3°
CACBCGCD220.0°19.8°
CBCANCAN137.4°115.6°
CBCANCAG43.8°64.7°
CACBH2H3116.9°119.4°
CGCBCAN40.5°47.5°
CBCGCD1CD2179.6°179.9°
CBCGCD1CAC179.7°179.6°
CBCGCD2CAG0.4°1.1°
CBCGCD2CBC179.9°179.4°
CGCBCAH1158.9°72.1°
CGCBH2H3116.9°119.3°
CBACBBCAWH19180.0°179.8°
CBACBBCAWCAP180.0°179.7°
CBBCBACAZH17180.0°179.9°
CANCANCAP0.4°175.4°
CANCANCAG178.8°179.7°
CANCANOAO179.6°4.6°
CANCAGCD225.6°44.8°
NCACBH2161.5°72.9°
NCACBH380.5°167.8°
CANCAGH7146.8°75.4°
CANCAGH895.5°164.7°
CBBCAWCAPCAQ90.7°69.8°
CBBCAWCAPCAN41.6°50.2°
CBBCAWCAPH9155.9°170.2°
CBBCAWCAXH15180.0°180.0°
CAWCBBCBAH18180.0°180.0°
CAWCAPCAQCAV96.4°69.2°
CAWCAPCAQCAN132.6°120.0°
CAWCAPCAQH9113.4°120.0°
CAWCAPCANH9114.3°120.0°
CAWCAPCAQCAR83.1°111.1°
CAWCAPCANN75.2°72.9°
CAWCAPCANOAO104.8°107.1°
CAPCAWCAXH150.1°0.3°
CAPCAWCBBH190.0°0.0°
CGCD1CACOAB180.0°180.0°
CGCD1CACCBD0.0°0.1°
CD1CGCD2CAG179.9°179.0°
CD1CGCD2CBC0.3°0.5°
CD1CGCBH239.5°79.3°
CD1CGCBH378.5°40.0°
CACCD1CGCD20.2°0.3°
CD1CACOABCBD180.0°179.9°
CD1CACOABCAA178.9°180.0°
CD1CACCBDCBC0.0°0.2°
CD1CACCBDH21180.0°179.7°
CAUCAVCAQH14180.0°179.4°
CAUCAVCAQCAP179.9°179.7°
CAVCAUCATH13180.0°179.7°
CAUCAVCAQCAR0.3°0.6°
CAVCAUCATCAS0.0°0.3°
CAVCAUCATH12180.0°179.7°
CAVCAQCAPCAR179.5°179.7°
CAVCAQCAPCAN131.0°50.8°
CAQCAVCAUCAT0.2°0.6°
CAVCAQCARCAS0.4°0.3°
CAVCAQCAPH916.9°170.8°
CAVCAQCARH10179.6°179.7°
CAQCAVCAUH13179.8°179.7°
CGCD2CAGN2.6°11.5°
CGCD2CAGCBC179.7°179.5°
CGCD2CBCCBD0.3°0.3°
CD2CGCBH2141.0°100.6°
CD2CGCBH3101.0°140.1°
CGCD2CAGH7123.8°108.5°
CGCD2CAGH8118.6°131.5°
CGCD2CBCH20179.7°179.6°
CAQCAPCANH9114.1°120.0°
CAQCAPCANN153.3°167.2°
CAQCAPCANOAO26.7°12.9°
CAPCAQCARCAS179.9°180.0°
CAPCAQCARH100.1°0.0°
CAPCAQCAVH140.1°0.3°
CANCAPCAQCAR49.5°128.9°
CAPCANNOAO180.0°180.0°
CAPCANNCAG179.3°5.0°
CAUCATCASH12180.0°180.0°
CAUCATCASCAR0.0°0.0°
CAUCATCASH11180.0°180.0°
CATCAUCAVH14179.8°180.0°
OABCACCBDCBC180.0°179.8°
CACOABCAAH4180.0°180.0°
CACOABCAAH560.0°60.0°
CACOABCAAH660.0°60.0°
OABCACCBDH210.0°0.2°
CAAOABCACCBD1.1°0.0°
OABCAAH4H5120.0°120.0°
OABCAAH4H6120.0°120.1°
OABCAAH5H6120.0°120.1°
CAQCARCASCAT0.2°0.0°
CAQCARCASH10180.0°180.0°
CARCAQCAPH9163.5°8.9°
CAQCARCASH11179.8°180.0°
CARCAQCAVH14179.7°180.0°
CANNCAGCD2155.5°135.6°
CANNCAH119.3°124.8°
CANNCAGH734.3°104.2°
CANNCAGH883.4°15.6°
NCANCAPH939.1°47.2°
CAGNCANOAO0.7°175.1°
NCAGCD2H7121.2°120.0°
NCAGCD2H8121.2°120.0°
NCAGCD2CBC177.7°169.0°
CAGNCAH1161.9°54.9°
NCAGH7H8116.4°119.9°
CACCBDCBCCD20.1°0.0°
CACCBDCBCH21180.0°180.0°
CACCBDCBCH20179.9°180.0°
OAOCANCAPH9140.9°132.9°
CAGCD2CBCCBD180.0°179.2°
CD2CAGH7H8116.3°120.0°
CAGCD2CBCH200.0°0.9°
CD2CBCCBDH20180.0°179.9°
CBCCD2CAGH756.5°71.0°
CBCCD2CAGH861.2°49.0°
CD2CBCCBDH21179.9°179.9°
CATCASCARH11180.0°180.0°
CATCASCARH10179.8°180.0°
CASCATCAUH13180.0°180.0°
CARCASCATH12180.0°180.0°
H1CACBH280.1°167.5°
H1CACBH337.9°48.2°
H4CAAH5H6120.0°119.9°
H10CARCASH110.2°0.0°
H11CASCATH120.0°0.0°
H12CATCAUH130.0°0.0°
H13CAUCAVH140.1°0.3°
H15CAXCAYH160.0°0.1°
H16CAYCAZH170.0°0.1°
H17CAZCBAH180.0°0.0°
H18CBACBBH190.1°0.2°
H20CBCCBDH210.1°0.0°
H24CBHCBIH250.1°0.0°
H25CBICBJH260.0°0.2°
H26CBJCBKH270.1°0.1°
H27CBKCBLH280.1°0.3°

225158

PDB entries from 2024-09-18

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