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VFB

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N1CADsing1.38Å1.38ÅAromatic
N1CAGsing1.38Å1.35ÅAromatic
CABCADdoub1.39Å1.39ÅAromatic
CABCAJsing1.38Å1.39ÅAromatic
CACCAEsing1.38Å1.39ÅAromatic
CACCAJdoub1.39Å1.39ÅAromatic
CADCAKsing1.40Å1.39ÅAromatic
CAECAKdoub1.39Å1.39ÅAromatic
CAFNAHsing1.36Å1.36ÅAromatic
CAFNAIdoub1.30Å1.31ÅAromatic
CAGNAHsing1.37Å1.32ÅAromatic
CAGNALdoub1.32Å1.39ÅAromatic
NAINALsing1.40Å1.38ÅAromatic
CAKNALsing1.37Å1.38ÅAromatic
N1HN1sing0.97Å1.00Å
CABHABsing1.08Å1.08Å
CACHACsing1.08Å1.08Å
CAEHAEsing1.08Å1.08Å
CAFHAFsing1.08Å1.08Å
NAHHNAHsing0.97Å1.00Å
CAJHAJsing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
CADN1CAG109.6°107.5°
N1CADCAB131.4°133.7°
N1CADCAK107.7°106.4°
CADN1HN1125.2°126.3°
N1CAGNAH143.5°142.8°
N1CAGNAL106.8°109.5°
CAGN1HN1125.2°126.3°
CADCABCAJ118.2°119.8°
CABCADCAK120.9°119.9°
CADCABHAB120.9°120.1°
CABCAJCAC120.8°120.4°
CAJCABHAB120.9°120.1°
CABCAJHAJ119.6°119.8°
CAECACCAJ120.9°120.5°
CACCAECAK118.2°119.8°
CAECACHAC119.5°119.8°
CACCAEHAE120.9°120.1°
CAJCACHAC119.5°119.8°
CACCAJHAJ119.6°119.8°
CADCAKCAE120.9°119.6°
CADCAKNAL106.3°107.4°
CAECAKNAL132.7°133.0°
CAKCAEHAE120.9°120.1°
NAHCAFNAI116.7°108.4°
CAFNAHCAG102.8°108.1°
NAHCAFHAF121.6°125.8°
CAFNAHHNAH128.6°125.9°
CAFNAINAL102.2°108.1°
NAICAFHAF121.6°125.8°
NAHCAGNAL109.8°107.7°
CAGNAHHNAH128.6°126.0°
CAGNALNAI108.5°107.7°
CAGNALCAK109.6°109.2°
NAINALCAK141.8°143.1°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
CADN1CAGHN1180.0°179.8°
N1CADCABCAK175.9°179.9°
N1CADCABCAJ175.3°179.9°
N1CADCAKCAE177.4°179.9°
CADN1CAGNAH179.1°180.0°
CADN1CAGNAL1.1°0.0°
N1CADCAKNAL0.3°0.0°
N1CADCABHAB4.7°0.1°
CAGN1CADCAB175.4°179.9°
CAGN1CADCAK0.9°0.0°
N1CAGNAHCAF179.2°180.0°
N1CAGNAHNAL179.8°180.0°
N1CAGNALNAI179.3°180.0°
N1CAGNALCAK0.9°0.0°
N1CAGNAHHNAH0.8°0.0°
CADCABCAJHAB180.0°180.0°
CADCABCAJCAC1.2°0.0°
CABCADCAKCAE0.7°0.0°
CABCADCAKNAL176.4°180.0°
CABCADN1HN14.6°0.1°
CADCABCAJHAJ178.8°180.0°
CABCAJCACCAE0.5°0.1°
CABCAJCACHAJ180.0°179.9°
CAJCABCADCAK0.6°0.0°
CABCAJCACHAC179.5°180.0°
CAECACCAJHAC180.0°179.9°
CACCAECAKCAD1.3°0.0°
CACCAECAKHAE180.0°179.9°
CACCAECAKNAL174.9°180.0°
CAECACCAJHAJ179.4°180.0°
CAJCACCAECAK0.7°0.1°
CACCAJCABHAB178.8°180.0°
CAJCACCAEHAE179.3°180.0°
CADCAKCAENAL176.2°179.9°
CADCAKNALCAG0.3°0.0°
CADCAKNALNAI179.9°179.9°
CAKCADN1HN1179.1°179.8°
CAKCADCABHAB179.4°180.0°
CADCAKCAEHAE178.7°179.9°
CAECAKNALCAG176.3°179.9°
CAECAKNALNAI3.5°0.0°
CAKCAECACHAC179.3°180.0°
NAHCAFNAIHAF180.0°179.9°
CAFNAHCAGHNAH180.0°180.0°
CAFNAHCAGNAL0.7°0.1°
NAHCAFNAINAL0.1°0.0°
NAICAFNAHCAG0.5°0.1°
CAFNAINALCAG0.3°0.0°
CAFNAINALCAK179.5°179.9°
NAICAFNAHHNAH179.5°180.0°
NAHCAGNALNAI0.7°0.1°
NAHCAGNALCAK179.2°180.0°
NAHCAGN1HN10.9°0.2°
CAGNAHCAFHAF179.5°180.0°
CAGNALNAICAK179.8°179.9°
NALCAGN1HN1178.9°179.8°
NALCAGNAHHNAH179.3°180.0°
NALNAICAFHAF179.9°179.9°
NALCAKCAEHAE5.1°0.1°
HABCABCAJHAJ1.2°0.0°
HACCACCAEHAE0.7°0.1°
HACCACCAJHAJ0.6°0.1°
HAFCAFNAHHNAH0.5°0.1°

248636

PDB entries from 2026-02-04

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