Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

VF9

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C10C11doub1.35Å1.25ÅAromatic
C10C9sing1.41Å1.40ÅAromatic
C11O1sing1.34Å1.28ÅAromatic
C9C8doub1.35Å1.27ÅAromatic
O1C8sing1.34Å1.29ÅAromatic
C8C7sing1.51Å1.50Å
C7C6sing1.55Å1.53Å
C7Nsing1.45Å1.37Å
C6C5sing1.47Å1.47Å
NC2sing1.48Å1.39Å
NC1sing1.35Å1.37Å
CC1sing1.51Å1.50Å
C2C3sing1.54Å1.51Å
C1Odoub1.21Å1.19Å
C5C4sing1.53Å1.46Å
C4C3sing1.51Å1.49Å
C7H1sing1.09Å1.10Å
C9H2sing1.08Å1.08Å
C5H3sing1.09Å1.10Å
C5H4sing1.09Å1.10Å
C6H5sing1.09Å1.10Å
C6H6sing1.09Å1.10Å
C4H7sing1.09Å1.10Å
C4H8sing1.09Å1.10Å
C3H9sing1.09Å1.10Å
C3H10sing1.09Å1.10Å
C2H11sing1.09Å1.10Å
C2H12sing1.09Å1.10Å
CH13sing1.09Å1.10Å
CH14sing1.09Å1.10Å
CH15sing1.09Å1.10Å
C11H16sing1.08Å1.08Å
C10H17sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C11C10C9107.1°106.9°
C10C11O1108.5°108.4°
C10C11H16125.7°125.8°
C11C10H17126.5°126.5°
C10C9C8106.0°106.8°
C10C9H2127.0°126.6°
C9C10H17126.4°126.6°
C11O1C8110.4°109.5°
O1C11H16125.7°125.8°
C9C8O1108.0°108.4°
C9C8C7132.5°125.8°
C8C9H2127.0°126.6°
O1C8C7119.5°125.8°
C8C7C6111.6°109.4°
C8C7N108.8°109.5°
C8C7H1107.9°109.4°
C6C7N111.3°109.6°
C7C6C5116.9°110.3°
C6C7H1107.5°109.4°
C7C6H5107.6°109.3°
C7C6H6107.6°109.3°
C7NC2117.8°122.7°
C7NC1115.6°118.6°
NC7H1109.7°109.5°
C6C5C4110.4°114.3°
C6C5H3109.3°108.5°
C6C5H4109.2°108.5°
C5C6H5107.6°109.3°
C5C6H6107.6°109.3°
C2NC1126.6°118.6°
NC2C3109.3°112.1°
NC2H11109.5°109.0°
NC2H12109.5°108.8°
NC1C116.8°120.0°
NC1O121.5°120.0°
CC1O121.7°120.0°
C1CH13109.5°109.5°
C1CH14109.5°109.4°
C1CH15109.5°109.4°
C2C3C4118.1°110.1°
C2C3H9107.3°109.4°
C2C3H10107.3°109.3°
C3C2H11109.5°108.9°
C3C2H12109.5°109.0°
C5C4C3111.9°109.3°
C4C5H3109.2°108.5°
C4C5H4109.3°108.6°
C5C4H7108.8°109.5°
C5C4H8108.9°109.5°
C3C4H7108.9°109.5°
C3C4H8108.8°109.5°
C4C3H9107.3°109.3°
C4C3H10107.3°109.4°
H3C5H4109.5°108.3°
H5C6H6109.5°109.3°
H7C4H8109.5°109.6°
H9C3H10109.5°109.4°
H11C2H12109.5°109.0°
H13CH14109.5°109.4°
H13CH15109.5°109.5°
H14CH15109.4°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C11C10C9H17180.0°180.0°
C10C11O1H16180.0°179.9°
C11C10C9C80.3°0.2°
C10C11O1C81.2°0.1°
C11C10C9H2179.7°179.8°
C9C10C11O10.9°0.1°
C10C9C8H2180.0°180.0°
C10C9C8O10.4°0.3°
C10C9C8C7179.6°180.0°
C9C10C11H16179.1°179.9°
C11O1C8C91.0°0.2°
C11O1C8C7179.7°180.0°
O1C11C10H17179.1°179.9°
C9C8O1C7179.3°179.8°
C9C8C7C63.4°175.0°
C9C8C7N126.6°54.9°
C9C8C7H1114.5°65.1°
C8C9C10H17179.7°179.8°
O1C8C7C6177.5°5.3°
O1C8C7N54.3°125.4°
O1C8C7H164.6°114.6°
O1C8C9H2179.6°179.8°
C8O1C11H16178.8°180.0°
C8C7C6N121.8°120.1°
C8C7C6H1118.1°119.9°
C8C7NH1117.8°119.9°
C8C7C6C5139.2°168.7°
C8C7NC256.4°149.3°
C8C7NC1125.3°30.8°
C7C8C9H20.4°0.0°
C8C7C6H518.2°71.1°
C8C7C6H699.7°48.5°
C6C7NH1118.8°120.0°
C7C6C5H5121.1°120.2°
C7C6C5H6121.1°120.2°
C6C7NC267.0°90.7°
C6C7NC1111.3°89.3°
C7C6C5C481.9°62.8°
C7C6C5H3158.0°176.0°
C7C6C5H438.2°58.5°
C7C6H5H6116.7°119.6°
NC7C6C517.4°71.2°
C7NC2C1178.1°180.0°
C7NC1C2.6°174.2°
C7NC2C394.2°42.1°
C7NC1O177.1°5.8°
NC7C6H5103.6°49.0°
NC7C6H6138.5°168.5°
C7NC2H11145.9°162.8°
C7NC2H1225.8°78.5°
C6C5C4H3120.2°121.2°
C6C5C4H4120.1°121.3°
C6C5C4C379.9°85.0°
C5C6C7H1102.6°48.8°
C6C5H3H4119.6°117.6°
C5C6H5H6116.6°119.6°
C6C5C4H740.5°34.9°
C6C5C4H8159.8°155.0°
C2NC1C179.3°5.8°
NC2C3H11119.9°120.7°
NC2C3H12120.0°120.5°
C2NC1O1.0°174.2°
NC2C3C461.2°40.6°
C2NC7H1174.2°29.3°
NC2C3H960.1°160.8°
NC2C3H10177.6°79.5°
NC2H11H12120.1°118.6°
NC1CO179.7°180.0°
C1NC2C383.9°137.9°
C1NC7H17.5°150.7°
C1NC2H1136.0°17.2°
C1NC2H12156.1°101.5°
NC1CH13179.7°90.0°
NC1CH1459.7°30.0°
NC1CH1560.2°150.0°
C1CH13H14120.0°119.9°
C1CH13H15120.0°120.0°
C1CH14H15120.0°120.0°
C2C3C4C556.0°91.9°
C2C3C4H9121.2°120.2°
C2C3C4H10121.2°120.1°
C2C3C4H764.3°28.0°
C2C3C4H8176.4°148.2°
C2C3H9H10116.1°119.7°
C3C2H11H12120.1°118.8°
OC1CH130.0°90.0°
OC1CH14120.0°150.0°
OC1CH15120.0°30.0°
C5C4C3H7120.3°119.9°
C5C4C3H8120.4°119.9°
C4C5H3H4119.6°117.7°
C4C5C6H539.2°57.4°
C4C5C6H6157.0°176.9°
C5C4H7H8118.9°120.1°
C5C4C3H965.2°147.9°
C5C4C3H10177.3°28.2°
C3C4C5H3160.0°153.8°
C3C4C5H440.2°36.2°
C3C4H7H8118.9°120.1°
C4C3H9H10116.1°119.7°
C4C3C2H11178.9°80.1°
C4C3C2H1258.8°161.2°
H1C7C6H5136.3°169.1°
H1C7C6H618.4°71.4°
H2C9C10H170.3°0.2°
H3C5C6H581.0°63.8°
H3C5C6H636.9°55.7°
H3C5C4H779.7°86.3°
H3C5C4H839.6°33.8°
H4C5C6H5159.3°178.7°
H4C5C6H682.8°61.7°
H4C5C4H7160.6°156.1°
H4C5C4H880.1°83.7°
H7C4C3H9174.5°92.2°
H7C4C3H1056.9°148.1°
H8C4C3H955.2°28.0°
H8C4C3H1062.4°91.7°
H9C3C2H1159.9°40.1°
H9C3C2H12179.9°78.7°
H10C3C2H1157.6°159.8°
H10C3C2H1262.4°41.0°
H13CH14H15120.0°120.1°
H16C11C10H170.9°0.1°

224931

PDB entries from 2024-09-11

PDB statisticsPDBj update infoContact PDBjnumon