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SummaryGeometryRelated PDB entries

VEK

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
C01C02sing1.51Å1.55Å
C02C03doub1.35Å1.45ÅAromatic
C02O29sing1.34Å1.45ÅAromatic
C03C04sing1.41Å1.50ÅAromatic
C04C05sing1.51Å1.55Å
C04N28doub1.30Å1.42ÅAromatic
C05N06sing1.47Å1.45Å
N06C07sing1.47Å1.48Å
N06C27sing1.47Å1.47Å
C07C08sing1.53Å1.52Å
C08N09sing1.47Å1.46Å
N09C10sing1.39Å1.50Å
N09C26sing1.47Å1.50Å
C10C11doub1.39Å1.38ÅAromatic
C10C25sing1.40Å1.48ÅAromatic
C11BRsing1.89Å1.94Å
C11C13sing1.38Å1.46ÅAromatic
C13N14doub1.32Å1.41ÅAromatic
N14C15sing1.33Å1.42ÅAromatic
C15N16sing1.35Å1.37ÅAromatic
C15C25doub1.40Å1.42ÅAromatic
N16C17doub1.31Å1.42ÅAromatic
C17C18sing1.47Å1.40Å
C17N24sing1.37Å1.38ÅAromatic
C18C19doub1.36Å1.43ÅAromatic
C18N22sing1.38Å1.36ÅAromatic
C19N20sing1.33Å1.36ÅAromatic
N20C21doub1.31Å1.39ÅAromatic
C21N22sing1.35Å1.41ÅAromatic
N22C23sing1.46Å1.47Å
N24C25sing1.38Å1.40ÅAromatic
C26C27sing1.53Å1.57Å
N28O29sing1.21Å1.48ÅAromatic
C01H01sing1.09Å1.10Å
C01H01Asing1.09Å1.10Å
C01H01Bsing1.09Å1.10Å
C03H03sing1.08Å1.08Å
C05H05sing1.09Å1.10Å
C05H05Asing1.09Å1.10Å
C07H07sing1.09Å1.10Å
C07H07Asing1.09Å1.10Å
C08H08sing1.09Å1.10Å
C08H08Asing1.09Å1.10Å
C13H13sing1.08Å1.08Å
C19H19sing1.08Å1.08Å
C21H21sing1.08Å1.08Å
C23H23sing1.09Å1.10Å
C23H23Asing1.09Å1.10Å
C23H23Bsing1.09Å1.10Å
N24HN24sing0.97Å1.00Å
C26H26sing1.09Å1.10Å
C26H26Asing1.09Å1.10Å
C27H27sing1.09Å1.10Å
C27H27Asing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
C01C02C03127.4°126.8°
C01C02O29124.3°126.8°
C02C01H01109.5°109.5°
C02C01H01A109.5°109.5°
C02C01H01B109.5°109.4°
C03C02O29108.3°106.4°
C02C03C04107.1°104.0°
C02C03H03126.5°128.0°
C02O29N28108.2°111.6°
C03C04C05126.8°126.8°
C03C04N28108.7°106.4°
C04C03H03126.5°128.0°
C05C04N28124.4°126.8°
C04C05N06104.9°109.5°
C04C05H05110.6°109.5°
C04C05H05A110.6°109.5°
C04N28O29107.8°111.6°
C05N06C07114.4°111.0°
C05N06C27117.5°111.0°
N06C05H05110.6°109.4°
N06C05H05A110.6°109.5°
C07N06C27114.4°110.9°
N06C07C08111.9°109.4°
N06C07H07108.8°109.5°
N06C07H07A108.8°109.5°
N06C27C26112.2°109.4°
N06C27H27108.8°109.5°
N06C27H27A108.8°109.5°
C07C08N09113.8°109.4°
C08C07H07108.8°109.5°
C08C07H07A108.9°109.5°
C07C08H08108.4°109.5°
C07C08H08A108.4°109.5°
C08N09C10121.0°111.0°
C08N09C26114.5°110.8°
N09C08H08108.3°109.5°
N09C08H08A108.4°109.5°
C10N09C26112.3°111.0°
N09C10C11120.4°121.0°
N09C10C25121.7°120.9°
N09C26C27113.5°109.4°
N09C26H26108.4°109.5°
N09C26H26A108.5°109.5°
C11C10C25117.6°118.1°
C10C11BR121.6°120.3°
C10C11C13122.0°119.4°
C10C25C15120.2°119.4°
C10C25N24132.7°134.2°
BRC11C13116.1°120.3°
C11C13N14119.7°121.5°
C11C13H13120.1°119.3°
C13N14C15119.5°121.7°
N14C13H13120.1°119.2°
N14C15N16130.5°133.0°
N14C15C25121.0°120.0°
N16C15C25108.5°107.1°
C15N16C17107.7°109.9°
C15C25N24107.2°106.4°
N16C17C18124.1°125.2°
N16C17N24108.2°109.6°
C18C17N24127.5°125.2°
C17C18C19123.2°126.8°
C17C18N22128.1°126.8°
C17N24C25108.4°107.0°
C17N24HN24125.8°126.5°
C19C18N22108.6°106.4°
C18C19N20107.1°107.8°
C18C19H19126.5°126.0°
C18N22C21107.3°107.1°
C18N22C23127.5°126.5°
C19N20C21108.7°109.6°
N20C19H19126.4°126.1°
N20C21N22108.2°109.1°
N20C21H21125.9°125.4°
C21N22C23125.2°126.5°
N22C21H21125.9°125.5°
N22C23H23109.5°109.5°
N22C23H23A109.4°109.5°
N22C23H23B109.4°109.5°
C25N24HN24125.8°126.5°
C27C26H26108.5°109.5°
C27C26H26A108.4°109.5°
C26C27H27108.8°109.5°
C26C27H27A108.8°109.5°
H01C01H01A109.5°109.6°
H01C01H01B109.4°109.5°
H01AC01H01B109.5°109.4°
H05C05H05A109.5°109.4°
H07C07H07A109.5°109.5°
H08C08H08A109.5°109.5°
H23C23H23A109.5°109.5°
H23C23H23B109.5°109.5°
H23AC23H23B109.5°109.4°
H26C26H26A109.5°109.5°
H27C27H27A109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
C01C02C03O29179.3°179.8°
C01C02C03C04179.2°180.0°
C01C02O29N28178.8°179.8°
C02C01H01H01A120.0°120.0°
C02C01H01H01B120.0°120.0°
C02C01H01AH01B120.0°119.9°
C01C02C03H030.8°0.0°
C02C03C04H03180.0°180.0°
C02C03C04C05176.8°180.0°
C02C03C04N280.4°0.0°
C03C02O29N280.5°0.4°
C03C02C01H01179.2°89.9°
C03C02C01H01A60.8°150.0°
C03C02C01H01B59.2°30.0°
O29C02C03C040.1°0.2°
C02O29N28C040.7°0.5°
O29C02C01H010.0°90.4°
O29C02C01H01A120.0°29.8°
O29C02C01H01B120.0°149.7°
O29C02C03H03179.9°179.8°
C03C04C05N28175.9°180.0°
C03C04C05N0693.3°95.1°
C03C04N28O290.7°0.3°
C03C04C05H0526.0°145.0°
C03C04C05H05A147.4°25.0°
C04C05N06H05119.3°120.0°
C04C05N06H05A119.3°120.1°
C04C05N06C07120.6°170.0°
C04C05N06C27100.9°66.2°
C05C04N28O29177.2°179.7°
C05C04C03H033.2°0.1°
C04C05H05H05A122.1°120.0°
N28C04C05N0682.6°84.9°
N28C04C03H03179.6°180.0°
N28C04C05H05158.1°35.0°
N28C04C05H05A36.7°155.0°
C05N06C07C27139.8°123.9°
C05N06C07C08159.7°64.6°
C05N06C27C26162.4°64.6°
N06C05H05H05A122.1°120.0°
C05N06C07H0779.9°55.4°
C05N06C07H07A39.4°175.5°
C05N06C27H2777.2°175.5°
C05N06C27H27A42.0°55.4°
N06C07C08H07120.3°120.0°
N06C07C08H07A120.3°119.9°
N06C07C08N0938.7°58.4°
C07N06C27C2623.9°59.3°
C07N06C05H05120.1°70.0°
C07N06C05H05A1.3°49.9°
N06C07H07H07A118.9°120.0°
N06C07C08H08159.3°61.6°
N06C07C08H08A81.9°178.3°
C07N06C27H27144.3°60.6°
C07N06C27H27A96.5°179.3°
C27N06C07C0860.5°59.3°
N06C27C26N0930.5°58.4°
N06C27C26H27120.4°119.9°
N06C27C26H27A120.4°120.0°
C27N06C05H0518.4°53.8°
C27N06C05H05A139.8°173.8°
C27N06C07H0759.8°179.3°
C27N06C07H07A179.1°60.6°
N06C27C26H2690.1°61.6°
N06C27C26H26A151.2°178.4°
N06C27H27H27A118.8°120.0°
C07C08N09H08120.6°120.0°
C07C08N09H08A120.7°120.0°
C07C08N09C10155.3°176.8°
C07C08N09C2615.8°59.3°
C08C07H07H07A118.9°120.0°
C07C08H08H08A118.0°120.0°
C08N09C10C26140.3°123.8°
C08N09C10C11159.1°118.1°
C08N09C10C2526.8°62.2°
C08N09C26C2751.5°59.3°
N09C08C07H0781.6°178.4°
N09C08C07H07A159.1°61.5°
N09C08H08H08A118.0°120.0°
C08N09C26H2669.1°60.7°
C08N09C26H26A172.1°179.3°
N09C10C11C25174.3°179.7°
N09C10C11BR9.9°0.0°
N09C10C11C13175.6°180.0°
N09C10C25C15175.1°179.7°
N09C10C25N245.1°0.8°
C10N09C26C27165.4°176.8°
C10N09C08H0834.7°63.2°
C10N09C08H08A84.0°56.8°
C10N09C26H2673.9°63.2°
C10N09C26H26A44.9°56.8°
C26N09C10C1160.6°118.1°
C26N09C10C25113.5°61.6°
N09C26C27H26120.6°119.9°
N09C26C27H26A120.6°120.0°
C26N09C08H08104.8°60.7°
C26N09C08H08A136.5°179.3°
N09C26H26H26A118.2°120.1°
N09C26C27H2789.8°61.6°
N09C26C27H27A150.9°178.4°
C10C11BRC13174.8°179.9°
C10C11C13N140.8°0.1°
C11C10C25C150.8°0.6°
C11C10C25N24179.4°179.5°
C10C11C13H13179.1°180.0°
C25C10C11BR175.7°179.7°
C25C10C11C131.3°0.4°
C10C25C15N140.0°0.5°
C10C25C15N16180.0°179.6°
C10C25C15N24179.8°179.2°
C10C25N24C17179.8°179.5°
C10C25N24HN240.2°0.9°
BRC11C13N14175.6°180.0°
BRC11C13H134.4°0.0°
C11C13N14H13180.0°180.0°
C11C13N14C150.1°0.0°
C13N14C15N16179.6°179.9°
C13N14C15C250.5°0.3°
N14C15N16C25179.9°179.8°
N14C15N16C17180.0°180.0°
N14C15C25N24179.8°179.7°
C15N14C13H13179.9°180.0°
C15N16C17C18176.2°180.0°
C15N16C17N240.3°0.1°
N16C15C25N240.2°0.4°
C25C15N16C170.1°0.2°
C15C25N24C170.4°0.5°
C15C25N24HN24179.6°179.9°
N16C17C18N24175.1°179.9°
N16C17C18C1912.4°6.0°
N16C17C18N22171.9°173.7°
N16C17N24C250.5°0.3°
N16C17N24HN24179.5°180.0°
C17C18C19N22176.4°179.7°
C17C18C19N20176.8°180.0°
C17C18N22C21176.5°179.9°
C17C18N22C233.7°0.0°
C18C17N24C25176.2°179.7°
C17C18C19H193.2°0.1°
C18C17N24HN243.8°0.1°
N24C17C18C19162.7°174.0°
N24C17C18N2213.0°6.4°
C17N24C25HN24180.0°179.7°
C18C19N20H19180.0°180.0°
C18C19N20C210.3°0.0°
C19C18N22C210.3°0.4°
C19C18N22C23179.9°179.7°
N22C18C19N200.4°0.3°
C18N22C21N200.1°0.4°
C18N22C21C23179.8°179.9°
N22C18C19H19179.6°179.8°
C18N22C21H21179.9°179.9°
C18N22C23H23180.0°84.5°
C18N22C23H23A60.0°155.5°
C18N22C23H23B60.0°35.5°
C19N20C21N220.1°0.2°
C19N20C21H21179.8°180.0°
N20C21N22H21180.0°179.7°
N20C21N22C23179.9°179.7°
C21N20C19H19179.7°180.0°
C21N22C23H230.3°95.4°
C21N22C23H23A119.7°24.7°
C21N22C23H23B120.3°144.6°
C23N22C21H210.1°0.0°
N22C23H23H23A120.0°120.1°
N22C23H23H23B120.0°120.0°
N22C23H23AH23B120.0°120.0°
C27C26H26H26A118.2°120.1°
C26C27H27H27A118.8°120.1°
H01C01H01AH01B120.0°120.0°
H07C07C08H0839.0°58.4°
H07C07C08H08A157.7°61.6°
H07AC07C08H0880.3°178.4°
H07AC07C08H08A38.4°58.4°
H23C23H23AH23B120.0°120.0°
H26C26C27H27149.6°178.5°
H26C26C27H27A30.4°58.4°
H26AC26C27H2730.8°58.4°
H26AC26C27H27A88.4°61.6°

223532

PDB entries from 2024-08-07

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