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VEC

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C3O1sing1.45Å1.40Å
O1C2sing1.34Å1.36Å
C2Odoub1.21Å1.21Å
C2C1sing1.51Å1.53Å
C1Nsing1.46Å1.47Å
CNsing1.46Å1.47Å
NC4sing1.35Å1.42Å
C4C5sing1.48Å1.49Å
C4O2doub1.22Å1.22Å
C6C5doub1.40Å1.39ÅAromatic
C6C7sing1.38Å1.38ÅAromatic
C5C10sing1.40Å1.39ÅAromatic
C7C8doub1.38Å1.37ÅAromatic
C10C9doub1.38Å1.39ÅAromatic
C8C9sing1.39Å1.39ÅAromatic
C9O3sing1.36Å1.34Å
C7H1sing1.08Å1.08Å
C8H2sing1.08Å1.08Å
C1H3sing1.09Å1.10Å
C1H4sing1.09Å1.10Å
C6H5sing1.08Å1.08Å
C3H6sing1.09Å1.10Å
C3H7sing1.09Å1.10Å
C3H8sing1.09Å1.10Å
O3H9sing0.97Å0.95Å
CH10sing1.09Å1.10Å
CH11sing1.09Å1.10Å
CH12sing1.09Å1.10Å
C10H13sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C3O1C2119.1°117.0°
O1C3H6109.5°109.5°
O1C3H7109.5°109.5°
O1C3H8109.5°109.5°
O1C2O112.7°120.0°
O1C2C1122.8°120.0°
OC2C1124.5°120.0°
C2C1N115.3°109.5°
C2C1H3108.0°109.5°
C2C1H4108.0°109.5°
C1NC115.6°120.0°
C1NC4116.8°120.0°
NC1H3108.0°109.5°
NC1H4108.0°109.5°
CNC4117.9°120.0°
NCH10109.5°109.5°
NCH11109.5°109.5°
NCH12109.4°109.5°
NC4C5118.3°120.0°
NC4O2120.4°120.0°
C5C4O2121.3°120.0°
C4C5C6120.4°120.1°
C4C5C10119.5°120.1°
C5C6C7120.4°120.0°
C6C5C10120.0°119.8°
C5C6H5119.8°120.0°
C6C7C8120.8°120.2°
C6C7H1119.6°119.9°
C7C6H5119.8°120.0°
C5C10C9117.9°119.8°
C5C10H13121.0°120.1°
C7C8C9118.6°120.3°
C8C7H1119.6°119.9°
C7C8H2120.7°119.8°
C10C9C8122.2°120.0°
C10C9O3123.1°120.0°
C9C10H13121.1°120.1°
C8C9O3114.7°120.0°
C9C8H2120.7°119.9°
C9O3H9109.5°114.0°
H3C1H4109.5°109.5°
H6C3H7109.4°109.5°
H6C3H8109.5°109.5°
H7C3H8109.5°109.4°
H10CH11109.5°109.4°
H10CH12109.5°109.5°
H11CH12109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C3O1C2O178.2°0.0°
C3O1C2C10.5°180.0°
O1C3H6H7120.0°120.0°
O1C3H6H8120.0°120.0°
O1C3H7H8120.0°120.0°
O1C2OC1178.6°180.0°
O1C2C1N65.4°180.0°
O1C2C1H3173.7°60.0°
O1C2C1H455.4°60.0°
C2O1C3H6180.0°180.0°
C2O1C3H760.0°60.0°
C2O1C3H860.0°60.0°
OC2C1N116.1°0.0°
OC2C1H34.8°120.0°
OC2C1H4123.1°120.0°
C2C1NH3120.9°120.0°
C2C1NH4120.8°120.0°
C2C1NC93.0°90.0°
C2C1NC4121.5°90.0°
C2C1H3H4117.3°120.0°
C1NCC4145.1°180.0°
C1NC4C596.1°174.5°
C1NC4O283.8°5.4°
NC1H3H4117.3°120.0°
C1NCH10180.0°90.0°
C1NCH1160.0°150.1°
C1NCH1260.0°30.0°
CNC4C548.5°5.5°
CNC4O2131.5°174.5°
CNC1H3146.1°150.0°
CNC1H427.8°30.0°
NCH10H11120.0°120.0°
NCH10H12120.0°120.0°
NCH11H12120.0°120.0°
NC4C5O2180.0°180.0°
NC4C5C658.8°149.4°
NC4C5C10123.6°31.5°
C4NC1H30.6°30.0°
C4NC1H4117.7°150.0°
C4NCH1034.9°90.0°
C4NCH1185.1°29.9°
C4NCH12154.9°150.0°
C4C5C6C10177.6°179.2°
C4C5C6C7176.8°179.7°
C4C5C10C9177.1°180.0°
C4C5C6H53.2°0.8°
C4C5C10H132.9°0.8°
O2C4C5C6121.2°30.7°
O2C4C5C1056.3°148.5°
C5C6C7H5180.0°179.5°
C5C6C7C80.8°0.0°
C6C5C10C90.4°0.9°
C5C6C7H1179.2°179.7°
C6C5C10H13179.6°180.0°
C7C6C5C100.7°0.6°
C6C7C8H1180.0°179.8°
C6C7C8C90.5°0.2°
C6C7C8H2179.5°179.7°
C5C10C9H13180.0°179.1°
C5C10C9C80.2°0.6°
C5C10C9O3179.3°179.4°
C10C5C6H5179.3°180.0°
C7C8C9C100.2°0.1°
C7C8C9H2180.0°179.9°
C7C8C9O3179.3°180.0°
C8C7C6H5179.2°179.5°
C10C9C8O3179.5°179.9°
C10C9C8H2179.8°180.0°
C10C9O3H9180.0°90.0°
C9C8C7H1179.5°180.0°
C8C9O3H90.5°90.1°
C8C9C10H13179.8°179.7°
O3C9C8H20.7°0.0°
O3C9C10H130.7°0.3°
H1C7C8H20.5°0.1°
H1C7C6H50.8°0.3°
H6C3H7H8120.0°120.0°
H10CH11H12120.0°120.0°

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PDB entries from 2024-07-10

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