VE8
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| O13 | P4 | doub | 1.48Å | 1.54Å | |
| O14 | P4 | sing | 1.61Å | 1.50Å | |
| P4 | O12 | sing | 1.61Å | 1.54Å | |
| P4 | O11 | sing | 1.61Å | 1.60Å | |
| O16 | P3 | doub | 1.48Å | 1.48Å | |
| O15 | P3 | sing | 1.61Å | 1.55Å | |
| P3 | O11 | sing | 1.61Å | 1.60Å | |
| P3 | O10 | sing | 1.61Å | 1.60Å | |
| O10 | P2 | sing | 1.61Å | 1.60Å | |
| O17 | P2 | doub | 1.48Å | 1.48Å | |
| P2 | O9 | sing | 1.61Å | 1.53Å | |
| P2 | O8 | sing | 1.61Å | 1.61Å | |
| C8 | N2 | doub | 1.30Å | 1.31Å | Aromatic |
| C8 | N | sing | 1.36Å | 1.37Å | Aromatic |
| O8 | C7 | sing | 1.43Å | 1.44Å | |
| O18 | C6 | sing | 1.44Å | 1.44Å | |
| O18 | C3 | sing | 1.44Å | 1.41Å | |
| C6 | C7 | sing | 1.53Å | 1.51Å | |
| C6 | C5 | sing | 1.54Å | 1.54Å | |
| C3 | N | sing | 1.47Å | 1.48Å | |
| C3 | C4 | sing | 1.54Å | 1.53Å | |
| N2 | C1 | sing | 1.36Å | 1.38Å | Aromatic |
| N | C2 | sing | 1.37Å | 1.38Å | Aromatic |
| N1 | C5 | sing | 1.47Å | 1.48Å | |
| N1 | P | sing | 1.68Å | 1.65Å | |
| O1 | C4 | sing | 1.43Å | 1.43Å | |
| C5 | C4 | sing | 1.54Å | 1.55Å | |
| O4 | P1 | doub | 1.48Å | 1.55Å | |
| O7 | P | doub | 1.48Å | 1.46Å | |
| C1 | C2 | doub | 1.40Å | 1.38Å | Aromatic |
| C1 | C | sing | 1.41Å | 1.43Å | |
| C2 | N3 | sing | 1.34Å | 1.34Å | |
| P | O2 | sing | 1.61Å | 1.64Å | |
| P | O6 | sing | 1.61Å | 1.59Å | |
| C | O | doub | 1.22Å | 1.23Å | |
| C | N5 | sing | 1.35Å | 1.38Å | |
| N3 | C9 | doub | 1.31Å | 1.33Å | |
| P1 | O2 | sing | 1.61Å | 1.60Å | |
| P1 | O5 | sing | 1.61Å | 1.51Å | |
| P1 | O3 | sing | 1.61Å | 1.54Å | |
| N5 | C9 | sing | 1.36Å | 1.37Å | |
| C9 | N4 | sing | 1.37Å | 1.33Å | |
| O9 | H1 | sing | 0.97Å | 0.95Å | |
| O15 | H2 | sing | 0.97Å | 0.95Å | |
| O14 | H3 | sing | 0.97Å | 0.95Å | |
| O12 | H4 | sing | 0.97Å | 0.95Å | |
| C7 | H5 | sing | 1.09Å | 1.10Å | |
| C7 | H6 | sing | 1.09Å | 1.10Å | |
| C6 | H7 | sing | 1.09Å | 1.10Å | |
| C5 | H8 | sing | 1.09Å | 1.10Å | |
| N1 | H9 | sing | 1.01Å | 1.00Å | |
| O6 | H10 | sing | 0.97Å | 0.95Å | |
| O5 | H11 | sing | 0.97Å | 0.95Å | |
| O3 | H12 | sing | 0.97Å | 0.95Å | |
| C4 | H13 | sing | 1.09Å | 1.10Å | |
| O1 | H14 | sing | 0.97Å | 0.95Å | |
| C3 | H15 | sing | 1.09Å | 1.10Å | |
| C8 | H16 | sing | 1.08Å | 1.08Å | |
| N4 | H17 | sing | 0.97Å | 1.00Å | |
| N4 | H18 | sing | 0.97Å | 1.00Å | |
| N5 | H19 | sing | 0.97Å | 1.00Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| O13 | P4 | O14 | 113.6° | 109.5° |
| O13 | P4 | O12 | 108.6° | 109.5° |
| O13 | P4 | O11 | 104.8° | 109.5° |
| O14 | P4 | O12 | 113.1° | 109.5° |
| O14 | P4 | O11 | 111.5° | 109.4° |
| P4 | O14 | H3 | 109.5° | 114.0° |
| O12 | P4 | O11 | 104.6° | 109.5° |
| P4 | O12 | H4 | 109.5° | 113.9° |
| P4 | O11 | P3 | 137.5° | 134.0° |
| O16 | P3 | O15 | 115.7° | 109.5° |
| O16 | P3 | O11 | 111.7° | 109.5° |
| O16 | P3 | O10 | 110.9° | 109.5° |
| O15 | P3 | O11 | 107.6° | 109.5° |
| O15 | P3 | O10 | 107.0° | 109.5° |
| P3 | O15 | H2 | 109.5° | 114.0° |
| O11 | P3 | O10 | 103.1° | 109.5° |
| P3 | O10 | P2 | 135.9° | 134.0° |
| O10 | P2 | O17 | 111.9° | 109.5° |
| O10 | P2 | O9 | 107.0° | 109.5° |
| O10 | P2 | O8 | 105.3° | 109.5° |
| O17 | P2 | O9 | 115.2° | 109.5° |
| O17 | P2 | O8 | 110.7° | 109.5° |
| O9 | P2 | O8 | 106.2° | 109.5° |
| P2 | O9 | H1 | 109.5° | 114.0° |
| P2 | O8 | C7 | 125.8° | 123.0° |
| N2 | C8 | N | 113.4° | 109.8° |
| C8 | N2 | C1 | 104.3° | 109.3° |
| N2 | C8 | H16 | 123.3° | 125.1° |
| C8 | N | C3 | 126.4° | 126.3° |
| C8 | N | C2 | 105.9° | 107.5° |
| N | C8 | H16 | 123.3° | 125.1° |
| O8 | C7 | C6 | 109.5° | 109.5° |
| O8 | C7 | H5 | 109.5° | 109.4° |
| O8 | C7 | H6 | 109.4° | 109.5° |
| C6 | O18 | C3 | 107.6° | 105.3° |
| O18 | C6 | C7 | 109.4° | 110.4° |
| O18 | C6 | C5 | 104.3° | 104.8° |
| O18 | C6 | H7 | 109.7° | 110.5° |
| O18 | C3 | N | 108.6° | 110.4° |
| O18 | C3 | C4 | 106.0° | 104.8° |
| O18 | C3 | H15 | 110.0° | 110.4° |
| C7 | C6 | C5 | 116.1° | 110.4° |
| C6 | C7 | H5 | 109.5° | 109.5° |
| C6 | C7 | H6 | 109.5° | 109.5° |
| C7 | C6 | H7 | 108.8° | 110.4° |
| C6 | C5 | N1 | 114.4° | 110.5° |
| C6 | C5 | C4 | 105.6° | 104.1° |
| C5 | C6 | H7 | 108.4° | 110.4° |
| C6 | C5 | H8 | 106.0° | 110.5° |
| N | C3 | C4 | 114.7° | 110.4° |
| C3 | N | C2 | 127.7° | 126.2° |
| N | C3 | H15 | 109.1° | 110.4° |
| C3 | C4 | O1 | 112.1° | 110.6° |
| C3 | C4 | C5 | 102.4° | 104.1° |
| C3 | C4 | H13 | 109.4° | 110.5° |
| C4 | C3 | H15 | 108.4° | 110.4° |
| N2 | C1 | C2 | 110.5° | 107.3° |
| N2 | C1 | C | 131.0° | 134.1° |
| N | C2 | C1 | 105.9° | 106.1° |
| N | C2 | N3 | 126.0° | 134.2° |
| C5 | N1 | P | 127.3° | 111.0° |
| N1 | C5 | C4 | 117.7° | 110.5° |
| N1 | C5 | H8 | 106.5° | 110.5° |
| C5 | N1 | H9 | 104.8° | 111.0° |
| N1 | P | O7 | 113.8° | 109.5° |
| N1 | P | O2 | 111.0° | 109.5° |
| N1 | P | O6 | 107.7° | 109.5° |
| P | N1 | H9 | 104.9° | 111.0° |
| O1 | C4 | C5 | 112.5° | 110.5° |
| O1 | C4 | H13 | 110.9° | 110.4° |
| C4 | O1 | H14 | 109.5° | 114.0° |
| C4 | C5 | H8 | 105.8° | 110.5° |
| C5 | C4 | H13 | 109.1° | 110.5° |
| O4 | P1 | O2 | 104.7° | 109.5° |
| O4 | P1 | O5 | 113.7° | 109.4° |
| O4 | P1 | O3 | 108.7° | 109.5° |
| O7 | P | O2 | 110.6° | 109.5° |
| O7 | P | O6 | 105.9° | 109.5° |
| C2 | C1 | C | 118.5° | 118.6° |
| C1 | C2 | N3 | 128.1° | 119.7° |
| C1 | C | O | 127.4° | 120.9° |
| C1 | C | N5 | 112.1° | 118.3° |
| C2 | N3 | C9 | 112.7° | 121.1° |
| O2 | P | O6 | 107.4° | 109.4° |
| P | O2 | P1 | 138.8° | 134.0° |
| P | O6 | H10 | 109.5° | 114.0° |
| O | C | N5 | 120.5° | 120.8° |
| C | N5 | C9 | 125.0° | 120.4° |
| C | N5 | H19 | 117.5° | 119.8° |
| N3 | C9 | N5 | 123.5° | 121.9° |
| N3 | C9 | N4 | 119.5° | 119.0° |
| O2 | P1 | O5 | 111.9° | 109.5° |
| O2 | P1 | O3 | 104.7° | 109.5° |
| O5 | P1 | O3 | 112.6° | 109.5° |
| P1 | O5 | H11 | 109.5° | 114.1° |
| P1 | O3 | H12 | 109.5° | 114.0° |
| N5 | C9 | N4 | 117.0° | 119.1° |
| C9 | N5 | H19 | 117.5° | 119.8° |
| C9 | N4 | H17 | 120.0° | 120.0° |
| C9 | N4 | H18 | 120.0° | 119.9° |
| H5 | C7 | H6 | 109.5° | 109.5° |
| H17 | N4 | H18 | 120.0° | 120.0° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| O13 | P4 | O14 | O12 | 124.3° | 120.0° |
| O13 | P4 | O14 | O11 | 118.1° | 120.0° |
| O13 | P4 | O12 | O11 | 111.5° | 120.0° |
| O13 | P4 | O11 | P3 | 59.3° | 45.0° |
| O13 | P4 | O14 | H3 | 0.0° | 180.0° |
| O13 | P4 | O12 | H4 | 0.0° | 60.0° |
| O14 | P4 | O12 | O11 | 121.5° | 120.0° |
| O14 | P4 | O11 | P3 | 64.0° | 75.0° |
| O14 | P4 | O12 | H4 | 127.0° | 60.0° |
| O12 | P4 | O11 | P3 | 173.5° | 165.0° |
| O12 | P4 | O14 | H3 | 124.3° | 60.0° |
| P4 | O11 | P3 | O16 | 71.7° | 45.0° |
| P4 | O11 | P3 | O15 | 56.3° | 75.0° |
| P4 | O11 | P3 | O10 | 169.2° | 165.0° |
| O11 | P4 | O14 | H3 | 118.1° | 60.0° |
| O11 | P4 | O12 | H4 | 111.5° | 180.0° |
| O16 | P3 | O15 | O11 | 125.6° | 120.0° |
| O16 | P3 | O15 | O10 | 124.2° | 120.0° |
| O16 | P3 | O11 | O10 | 119.2° | 120.0° |
| O16 | P3 | O10 | P2 | 102.2° | 40.0° |
| O16 | P3 | O15 | H2 | 0.0° | 180.0° |
| O15 | P3 | O11 | O10 | 112.8° | 120.0° |
| O15 | P3 | O10 | P2 | 24.9° | 80.0° |
| O11 | P3 | O10 | P2 | 138.1° | 160.0° |
| O11 | P3 | O15 | H2 | 125.6° | 60.0° |
| P3 | O10 | P2 | O17 | 28.2° | 40.0° |
| P3 | O10 | P2 | O9 | 98.8° | 80.0° |
| P3 | O10 | P2 | O8 | 148.5° | 160.0° |
| O10 | P3 | O15 | H2 | 124.2° | 60.0° |
| O10 | P2 | O17 | O9 | 122.5° | 120.0° |
| O10 | P2 | O17 | O8 | 117.1° | 120.0° |
| O10 | P2 | O9 | O8 | 112.1° | 120.0° |
| O10 | P2 | O8 | C7 | 65.5° | 175.0° |
| O10 | P2 | O9 | H1 | 125.0° | 60.0° |
| O17 | P2 | O9 | O8 | 122.9° | 120.0° |
| O17 | P2 | O8 | C7 | 55.5° | 55.0° |
| O17 | P2 | O9 | H1 | 0.0° | 180.0° |
| O9 | P2 | O8 | C7 | 178.8° | 65.0° |
| P2 | O8 | C7 | C6 | 88.6° | 180.0° |
| O8 | P2 | O9 | H1 | 122.9° | 60.0° |
| P2 | O8 | C7 | H5 | 31.4° | 60.0° |
| P2 | O8 | C7 | H6 | 151.4° | 60.0° |
| N2 | C8 | N | H16 | 180.0° | 179.9° |
| N2 | C8 | N | C3 | 178.9° | 180.0° |
| N2 | C8 | N | C2 | 0.1° | 0.2° |
| C8 | N2 | C1 | C2 | 0.2° | 0.2° |
| C8 | N2 | C1 | C | 179.2° | 179.9° |
| C8 | N | C3 | O18 | 117.6° | 23.9° |
| C8 | N | C3 | C2 | 178.8° | 179.7° |
| C8 | N | C3 | C4 | 124.1° | 91.5° |
| N | C8 | N2 | C1 | 0.2° | 0.0° |
| C8 | N | C2 | C1 | 0.0° | 0.4° |
| C8 | N | C2 | N3 | 179.7° | 179.7° |
| C8 | N | C3 | H15 | 2.3° | 146.1° |
| O8 | C7 | C6 | O18 | 161.9° | 69.6° |
| O8 | C7 | C6 | H5 | 120.0° | 120.0° |
| O8 | C7 | C6 | H6 | 120.0° | 120.0° |
| O8 | C7 | C6 | C5 | 80.4° | 175.0° |
| O8 | C7 | H5 | H6 | 120.0° | 120.0° |
| O8 | C7 | C6 | H7 | 42.2° | 52.8° |
| O18 | C6 | C7 | C5 | 117.7° | 115.3° |
| O18 | C6 | C7 | H7 | 119.8° | 122.4° |
| O18 | C6 | C5 | H7 | 116.8° | 118.9° |
| C6 | O18 | C3 | N | 162.7° | 159.3° |
| C6 | O18 | C3 | C4 | 39.1° | 40.5° |
| O18 | C6 | C5 | N1 | 147.7° | 142.7° |
| O18 | C6 | C5 | C4 | 16.7° | 24.0° |
| O18 | C6 | C7 | H5 | 41.9° | 50.4° |
| O18 | C6 | C7 | H6 | 78.1° | 170.4° |
| O18 | C6 | C5 | H8 | 95.2° | 94.7° |
| C6 | O18 | C3 | H15 | 77.9° | 78.4° |
| C3 | O18 | C6 | C7 | 159.6° | 159.4° |
| C3 | O18 | C6 | C5 | 34.8° | 40.5° |
| O18 | C3 | N | C4 | 118.3° | 115.4° |
| O18 | C3 | N | H15 | 120.0° | 122.3° |
| O18 | C3 | C4 | H15 | 118.1° | 118.9° |
| O18 | C3 | N | C2 | 61.2° | 156.4° |
| O18 | C3 | C4 | O1 | 147.0° | 142.7° |
| O18 | C3 | C4 | C5 | 26.2° | 24.0° |
| C3 | O18 | C6 | H7 | 81.2° | 78.3° |
| O18 | C3 | C4 | H13 | 89.5° | 94.7° |
| C7 | C6 | C5 | H7 | 122.8° | 122.3° |
| C7 | C6 | C5 | N1 | 91.8° | 98.5° |
| C7 | C6 | C5 | C4 | 137.1° | 142.8° |
| C6 | C7 | H5 | H6 | 120.0° | 120.0° |
| C7 | C6 | C5 | H8 | 25.2° | 24.1° |
| C6 | C5 | C4 | C3 | 5.2° | 0.0° |
| C6 | C5 | N1 | C4 | 124.9° | 114.6° |
| C6 | C5 | N1 | H8 | 116.7° | 122.7° |
| C6 | C5 | N1 | P | 158.0° | 145.0° |
| C6 | C5 | C4 | O1 | 125.9° | 118.8° |
| C6 | C5 | C4 | H8 | 112.1° | 118.7° |
| C5 | C6 | C7 | H5 | 159.6° | 65.0° |
| C5 | C6 | C7 | H6 | 39.6° | 55.0° |
| C6 | C5 | N1 | H9 | 35.6° | 21.0° |
| C6 | C5 | C4 | H13 | 110.6° | 118.7° |
| N | C3 | C4 | H15 | 122.2° | 122.3° |
| N | C3 | C4 | O1 | 93.2° | 98.5° |
| N | C3 | C4 | C5 | 145.9° | 142.8° |
| C3 | N | C2 | C1 | 179.0° | 179.9° |
| C3 | N | C2 | N3 | 1.3° | 0.0° |
| N | C3 | C4 | H13 | 30.2° | 24.1° |
| C3 | N | C8 | H16 | 1.1° | 0.1° |
| C4 | C3 | N | C2 | 57.1° | 88.2° |
| C3 | C4 | C5 | N1 | 123.9° | 118.6° |
| C3 | C4 | O1 | C5 | 114.8° | 114.7° |
| C3 | C4 | O1 | H13 | 122.7° | 122.6° |
| C3 | C4 | C5 | H13 | 115.9° | 118.6° |
| C3 | C4 | C5 | H8 | 117.3° | 118.7° |
| C3 | C4 | O1 | H14 | 180.0° | 65.3° |
| N2 | C1 | C2 | N | 0.1° | 0.3° |
| N2 | C1 | C2 | C | 179.4° | 179.8° |
| N2 | C1 | C2 | N3 | 179.8° | 179.7° |
| N2 | C1 | C | O | 1.1° | 0.1° |
| N2 | C1 | C | N5 | 179.2° | 179.4° |
| C1 | N2 | C8 | H16 | 179.8° | 180.0° |
| N | C2 | C1 | N3 | 179.7° | 179.9° |
| N | C2 | C1 | C | 179.3° | 179.9° |
| N | C2 | N3 | C9 | 179.2° | 180.0° |
| C2 | N | C3 | H15 | 178.9° | 34.2° |
| C2 | N | C8 | H16 | 179.9° | 179.8° |
| C5 | N1 | P | H9 | 122.4° | 124.0° |
| N1 | C5 | C4 | O1 | 3.3° | 0.1° |
| N1 | C5 | C4 | H8 | 118.8° | 122.7° |
| C5 | N1 | P | O7 | 159.1° | 180.0° |
| C5 | N1 | P | O2 | 75.3° | 60.0° |
| C5 | N1 | P | O6 | 42.0° | 60.0° |
| N1 | C5 | C6 | H7 | 30.9° | 23.7° |
| N1 | C5 | C4 | H13 | 120.2° | 122.7° |
| P | N1 | C5 | C4 | 77.1° | 100.3° |
| N1 | P | O7 | O2 | 125.8° | 120.0° |
| N1 | P | O7 | O6 | 118.1° | 120.0° |
| N1 | P | O2 | O6 | 117.5° | 120.0° |
| N1 | P | O2 | P1 | 49.0° | 180.0° |
| P | N1 | C5 | H8 | 41.3° | 22.3° |
| N1 | P | O6 | H10 | 122.1° | 60.0° |
| O1 | C4 | C5 | H13 | 123.5° | 122.6° |
| O1 | C4 | C5 | H8 | 122.1° | 122.6° |
| O1 | C4 | C3 | H15 | 29.0° | 23.8° |
| C4 | C5 | C6 | H7 | 100.1° | 94.9° |
| C4 | C5 | N1 | H9 | 160.5° | 135.7° |
| C5 | C4 | O1 | H14 | 65.2° | 180.0° |
| C5 | C4 | C3 | H15 | 91.9° | 94.9° |
| O4 | P1 | O2 | P | 17.7° | 40.0° |
| O4 | P1 | O2 | O5 | 123.5° | 120.0° |
| O4 | P1 | O2 | O3 | 114.3° | 120.0° |
| O4 | P1 | O5 | O3 | 124.1° | 120.0° |
| O4 | P1 | O5 | H11 | 0.0° | 60.0° |
| O4 | P1 | O3 | H12 | 0.0° | 180.0° |
| O7 | P | O2 | O6 | 115.1° | 120.0° |
| O7 | P | O2 | P1 | 78.3° | 60.0° |
| O7 | P | N1 | H9 | 78.5° | 56.0° |
| O7 | P | O6 | H10 | 0.0° | 180.0° |
| C2 | C1 | C | O | 179.6° | 179.8° |
| C2 | C1 | C | N5 | 0.1° | 0.4° |
| C1 | C2 | N3 | C9 | 0.4° | 0.1° |
| C | C1 | C2 | N3 | 0.4° | 0.1° |
| C1 | C | O | N5 | 179.7° | 179.5° |
| C1 | C | N5 | C9 | 0.5° | 0.5° |
| C1 | C | N5 | H19 | 179.5° | 179.8° |
| C2 | N3 | C9 | N5 | 0.0° | 0.0° |
| C2 | N3 | C9 | N4 | 178.9° | 180.0° |
| P | O2 | P1 | O5 | 105.8° | 159.9° |
| P | O2 | P1 | O3 | 132.0° | 80.0° |
| O2 | P | N1 | H9 | 47.0° | 64.0° |
| O2 | P | O6 | H10 | 118.2° | 60.0° |
| O6 | P | O2 | P1 | 166.6° | 60.0° |
| O6 | P | N1 | H9 | 164.4° | 176.0° |
| O | C | N5 | C9 | 179.3° | 179.9° |
| O | C | N5 | H19 | 0.7° | 0.3° |
| C | N5 | C9 | N3 | 0.5° | 0.3° |
| C | N5 | C9 | H19 | 180.0° | 179.8° |
| C | N5 | C9 | N4 | 178.5° | 179.7° |
| N3 | C9 | N5 | N4 | 179.0° | 180.0° |
| N3 | C9 | N4 | H17 | 0.0° | 0.0° |
| N3 | C9 | N4 | H18 | 180.0° | 180.0° |
| N3 | C9 | N5 | H19 | 179.5° | 179.9° |
| O2 | P1 | O5 | O3 | 117.6° | 120.0° |
| O2 | P1 | O5 | H11 | 118.3° | 180.0° |
| O2 | P1 | O3 | H12 | 111.4° | 60.0° |
| O5 | P1 | O3 | H12 | 126.8° | 60.0° |
| O3 | P1 | O5 | H11 | 124.1° | 59.9° |
| N5 | C9 | N4 | H17 | 179.0° | 180.0° |
| N5 | C9 | N4 | H18 | 1.0° | 0.0° |
| C9 | N4 | H17 | H18 | 180.0° | 179.9° |
| N4 | C9 | N5 | H19 | 1.5° | 0.0° |
| H5 | C7 | C6 | H7 | 77.8° | 172.7° |
| H6 | C7 | C6 | H7 | 162.2° | 67.3° |
| H7 | C6 | C5 | H8 | 147.9° | 146.4° |
| H8 | C5 | N1 | H9 | 81.1° | 101.6° |
| H8 | C5 | C4 | H13 | 1.4° | 0.0° |
| H13 | C4 | O1 | H14 | 57.3° | 57.3° |
| H13 | C4 | C3 | H15 | 152.4° | 146.5° |
