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VDU

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O2C17doub1.21Å1.23Å
C17Nsing1.34Å1.37Å
C17C16sing1.51Å1.51Å
NC18sing1.34Å1.37Å
C16C15sing1.54Å1.53Å
C18O1doub1.21Å1.23Å
C18C15sing1.51Å1.51Å
C15C14sing1.53Å1.53Å
O3C14sing1.43Å1.43Å
C14C13sing1.53Å1.52Å
C13C6sing1.53Å1.54Å
FC3sing1.41Å1.41Å
C4C3sing1.53Å1.51Å
C4C5sing1.53Å1.53Å
C6C5sing1.54Å1.56Å
C6C7sing1.51Å1.51Å
C3C2sing1.52Å1.51Å
C5C19sing1.53Å1.54Å
C5C10sing1.52Å1.59Å
C12C7doub1.31Å1.32Å
C7C8sing1.51Å1.51Å
C2C1sing1.53Å1.54Å
C10C1sing1.52Å1.57Å
C10C9sing1.53Å1.54Å
C8C9sing1.54Å1.53Å
C8Osing1.43Å1.43Å
C1Csing1.55Å1.53Å
C1C20sing1.53Å1.53Å
NH1sing0.97Å1.00Å
CH2sing1.09Å1.10Å
CH3sing1.09Å1.10Å
CH4sing1.09Å1.10Å
OH5sing0.97Å0.95Å
C10H6sing1.12Å1.10Å
C12H7sing1.08Å1.08Å
C12H8sing1.08Å1.08Å
C13H9sing1.09Å1.10Å
C13H10sing1.09Å1.10Å
C14H11sing1.09Å1.10Å
C15H12sing1.09Å1.10Å
C16H13sing1.09Å1.10Å
C16H14sing1.09Å1.10Å
C19H15sing1.09Å1.10Å
C19H16sing1.09Å1.10Å
C19H17sing1.09Å1.10Å
C2H18sing1.09Å1.10Å
C2H19sing1.09Å1.10Å
C20H20sing1.09Å1.10Å
C20H21sing1.09Å1.10Å
C20H22sing1.09Å1.10Å
C3H23sing1.09Å1.10Å
C4H24sing1.09Å1.10Å
C4H25sing1.09Å1.10Å
C6H26sing1.09Å1.10Å
C8H27sing1.09Å1.10Å
C9H28sing1.08Å1.10Å
C9H29sing1.09Å1.10Å
O3H30sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O2C17N125.2°125.4°
O2C17C16126.6°125.4°
NC17C16108.2°109.2°
C17NC18114.0°114.5°
C17NH1123.0°122.8°
C17C16C15105.1°103.6°
C17C16H13110.6°110.6°
C17C16H14110.6°110.7°
NC18O1124.9°125.4°
NC18C15108.3°109.2°
C18NH1123.0°122.7°
C16C15C18104.4°103.5°
C16C15C14115.4°110.6°
C16C15H12109.0°110.6°
C15C16H13110.5°110.6°
C15C16H14110.5°110.7°
O1C18C15126.8°125.4°
C18C15C14109.7°110.9°
C18C15H12109.2°110.4°
C15C14O3109.5°109.5°
C15C14C13113.1°109.4°
C15C14H11107.9°109.5°
C14C15H12109.0°110.6°
O3C14C13108.9°109.5°
O3C14H11109.3°109.5°
C14O3H30109.5°114.0°
C14C13C6114.1°109.5°
C14C13H9108.3°109.5°
C14C13H10108.3°109.5°
C13C14H11108.0°109.5°
C13C6C5114.1°109.7°
C13C6C7112.8°109.2°
C6C13H9108.3°109.5°
C6C13H10108.3°109.4°
C13C6H26106.3°109.9°
FC3C4108.5°108.8°
FC3C2108.4°109.1°
FC3H23110.2°108.5°
C3C4C5113.6°110.1°
C4C3C2112.3°109.2°
C4C3H23108.8°110.5°
C3C4H24108.4°109.2°
C3C4H25108.4°108.6°
C4C5C6111.3°108.0°
C4C5C19108.1°109.6°
C4C5C10107.9°110.7°
C5C4H24108.4°109.4°
C5C4H25108.4°110.1°
C5C6C7110.3°108.7°
C6C5C19109.8°107.9°
C6C5C10108.1°107.8°
C5C6H26106.1°109.3°
C6C7C12123.7°120.4°
C6C7C8114.8°119.2°
C7C6H26106.6°110.0°
C3C2C1110.2°111.1°
C3C2H18109.3°109.4°
C3C2H19109.3°109.5°
C2C3H23108.8°110.6°
C19C5C10111.7°112.7°
C5C19H15109.5°109.4°
C5C19H16109.5°109.5°
C5C19H17109.5°109.5°
C5C10C1111.8°115.6°
C5C10C9108.4°110.9°
C5C10H6108.0°105.9°
C12C7C8121.4°120.4°
C7C12H7120.0°120.0°
C7C12H8120.0°120.0°
C7C8C9113.7°108.8°
C7C8O110.9°109.8°
C7C8H27107.3°109.8°
C2C1C10109.8°112.1°
C2C1C108.5°106.5°
C2C1C20108.6°109.8°
C1C2H18109.3°109.1°
C1C2H19109.3°109.1°
C1C10C9111.8°111.6°
C10C1C111.3°108.4°
C10C1C20111.5°112.4°
C1C10H6108.2°106.3°
C10C9C8112.9°108.9°
C9C10H6108.5°105.7°
C10C9H28108.6°111.8°
C10C9H29108.6°110.2°
C9C8O109.4°109.4°
C9C8H27107.1°109.4°
C8C9H28108.6°109.3°
C8C9H29108.6°107.9°
C8OH5109.5°114.0°
OC8H27108.3°109.6°
CC1C20106.9°107.3°
C1CH2109.5°109.5°
C1CH3109.4°109.5°
C1CH4109.5°109.5°
C1C20H20109.5°109.5°
C1C20H21109.5°109.5°
C1C20H22109.5°109.5°
H2CH3109.5°109.4°
H2CH4109.5°109.4°
H3CH4109.5°109.4°
H7C12H8120.0°120.0°
H9C13H10109.4°109.5°
H13C16H14109.5°110.5°
H15C19H16109.5°109.5°
H15C19H17109.4°109.5°
H16C19H17109.5°109.5°
H18C2H19109.4°108.5°
H20C20H21109.4°109.5°
H20C20H22109.5°109.4°
H21C20H22109.5°109.5°
H24C4H25109.5°109.2°
H28C9H29109.5°108.6°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O2C17NC16180.0°180.0°
O2C17NC18180.0°180.0°
O2C17C16C15180.0°179.8°
O2C17NH10.0°0.3°
O2C17C16H1360.7°61.7°
O2C17C16H1460.7°61.1°
C17NC18H1180.0°179.7°
NC17C16C150.0°0.2°
C17NC18O1180.0°179.7°
C17NC18C150.0°0.3°
NC17C16H13119.3°118.3°
NC17C16H14119.3°118.9°
C16C17NC180.0°0.0°
C17C16C15H13119.3°118.5°
C17C16C15H14119.3°118.7°
C17C16C15C180.0°0.3°
C17C16C15C14120.4°118.5°
C16C17NH1180.0°179.7°
C17C16C15H12116.6°118.6°
C17C16H13H14122.0°123.0°
NC18C15C160.0°0.4°
NC18O1C15180.0°179.9°
NC18C15C14124.2°118.2°
NC18C15H12116.5°118.8°
C16C15C18O1180.0°179.6°
C16C15C18C14124.2°118.6°
C16C15C18H12116.4°118.4°
C16C15C14H12123.0°122.9°
C16C15C14O348.0°62.2°
C16C15C14C1373.6°177.8°
C16C15C14H11166.9°57.8°
C15C16H13H14122.0°122.9°
O1C18C15C1455.8°61.8°
O1C18NH10.0°0.0°
O1C18C15H1263.5°61.1°
C18C15C14H12119.5°122.9°
C18C15C14O369.5°176.5°
C18C15C14C13168.8°63.6°
C15C18NH1180.0°180.0°
C18C15C14H1149.4°56.4°
C18C15C16H13119.3°118.1°
C18C15C16H14119.3°119.1°
C15C14O3C13124.2°120.0°
C15C14O3H11118.0°120.0°
C15C14C13H11119.4°120.0°
C15C14C13C675.2°177.8°
C15C14C13H9164.1°62.2°
C15C14C13H1045.5°57.8°
C14C15C16H131.1°123.0°
C14C15C16H14120.2°0.2°
C15C14O3H30180.0°64.8°
O3C14C13H11118.6°120.0°
O3C14C13C6162.8°62.2°
O3C14C13H942.1°57.7°
O3C14C13H1076.5°177.8°
O3C14C15H12171.0°60.7°
C14C13C6H9120.7°120.0°
C14C13C6H10120.7°120.0°
C14C13C6C5156.5°87.1°
C14C13C6C776.5°153.9°
C14C13H9H10117.9°120.0°
C13C14C15H1249.3°59.3°
C14C13C6H2639.9°33.1°
C13C14O3H3055.8°55.2°
C13C6C5C453.2°66.3°
C13C6C5C7128.2°119.3°
C13C6C5H26116.7°120.6°
C13C6C7H26116.3°120.7°
C13C6C5C1966.5°52.1°
C13C6C5C10171.5°174.1°
C13C6C7C121.9°10.1°
C13C6C7C8178.0°170.2°
C6C13H9H10117.9°120.0°
C6C13C14H1144.2°57.8°
FC3C4C2119.7°119.0°
FC3C4H23119.8°119.0°
FC3C4C5177.6°178.6°
FC3C2H23119.8°119.2°
FC3C2C1177.3°178.9°
FC3C2H1862.5°58.3°
FC3C2H1957.2°60.5°
FC3C4H2457.0°61.2°
FC3C4H2561.7°57.9°
C3C4C5H24120.6°120.1°
C3C4C5H25120.6°119.8°
C3C4C5C6172.8°173.6°
C4C3C2H23120.4°121.9°
C3C4C5C1966.5°69.1°
C3C4C5C1054.4°55.8°
C4C3C2C157.5°60.0°
C4C3C2H18177.7°60.6°
C4C3C2H1962.6°179.4°
C3C4H24H25118.1°118.7°
C4C5C6C19119.6°118.4°
C4C5C6C10118.3°119.6°
C4C5C6C7178.6°174.4°
C5C4C3C257.9°62.4°
C4C5C19C10118.5°123.7°
C4C5C10C154.1°48.6°
C4C5C10C9177.7°177.0°
C4C5C10H664.8°68.8°
C4C5C19H15180.0°68.7°
C4C5C19H1660.0°171.3°
C4C5C19H1760.0°51.3°
C5C4C3H2362.5°59.5°
C5C4H24H25118.1°120.7°
C4C5C6H2663.5°54.3°
C5C6C7H26114.8°119.7°
C6C5C19C10119.9°118.9°
C5C6C7C12127.0°129.7°
C5C6C7C853.0°50.7°
C6C5C10C1174.6°166.5°
C6C5C10C961.8°65.2°
C6C5C10H655.6°49.1°
C5C6C13H982.8°152.9°
C5C6C13H1035.8°32.9°
C6C5C19H1558.4°174.0°
C6C5C19H1661.6°54.0°
C6C5C19H17178.4°66.0°
C6C5C4H2452.2°53.5°
C6C5C4H2566.5°66.6°
C7C6C5C1961.8°67.2°
C7C6C5C1060.3°54.8°
C6C7C12C8179.9°179.6°
C6C7C8C946.3°49.5°
C6C7C8O170.1°169.2°
C6C7C12H7179.9°8.6°
C6C7C12H80.1°171.4°
C7C6C13H944.2°33.9°
C7C6C13H10162.8°86.1°
C6C7C8H2771.8°70.3°
C3C2C1H18120.1°120.7°
C3C2C1H19120.1°120.8°
C3C2C1C1056.8°51.5°
C3C2C1C178.7°169.8°
C3C2C1C2065.4°74.2°
C3C2H18H19119.7°119.5°
C2C3C4H2462.7°57.8°
C2C3C4H25178.5°176.9°
C19C5C10C164.5°74.5°
C19C5C10C959.1°53.9°
C19C5C10H6176.6°168.1°
C5C19H15H16120.0°120.0°
C5C19H15H17120.0°120.0°
C5C19H16H17120.0°120.0°
C19C5C4H24172.9°170.8°
C19C5C4H2554.1°50.7°
C19C5C6H26176.9°172.7°
C5C10C1C256.6°46.5°
C5C10C1C9121.7°127.9°
C5C10C1H6118.8°117.2°
C5C10C9H6117.1°114.4°
C5C10C9C856.1°64.5°
C5C10C1C176.8°163.7°
C5C10C1C2063.8°77.7°
C10C5C19H1561.5°55.0°
C10C5C19H16178.5°65.0°
C10C5C19H1758.5°175.1°
C10C5C4H2466.2°64.3°
C10C5C4H25175.0°175.6°
C10C5C6H2654.8°65.3°
C5C10C9H2864.5°56.5°
C5C10C9H29176.6°177.3°
C12C7C8C9133.7°130.9°
C12C7C8O10.0°11.2°
C7C12H7H8180.0°180.0°
C12C7C6H26118.2°110.6°
C12C7C8H27108.1°109.4°
C7C8C9C1048.1°52.7°
C7C8C9O124.5°119.9°
C7C8C9H27118.3°120.0°
C7C8OH27117.4°120.7°
C7C8OH5180.0°60.0°
C8C7C12H70.0°171.8°
C8C7C12H8180.0°8.2°
C8C7C6H2661.7°69.0°
C7C8C9H2872.4°69.7°
C7C8C9H29168.6°172.4°
C2C1C10C120.2°117.3°
C2C1C10C20120.5°124.2°
C2C1C10C9178.3°174.4°
C2C1CC20117.0°117.6°
C2C1CH2180.0°57.6°
C2C1CH360.0°62.4°
C2C1CH460.0°177.6°
C2C1C10H662.2°70.8°
C1C2H18H19119.7°118.8°
C2C1C20H20180.0°176.7°
C2C1C20H2160.0°56.7°
C2C1C20H2260.0°63.4°
C1C2C3H2362.9°61.9°
C1C10C9H6119.2°115.2°
C1C10C9C8179.7°165.1°
C10C1CC20122.0°121.7°
C10C1CH259.0°178.3°
C10C1CH3179.1°58.3°
C10C1CH460.9°61.7°
C10C1C2H18176.9°69.3°
C10C1C2H1963.3°172.3°
C10C1C20H2058.8°51.2°
C10C1C20H2161.2°68.8°
C10C1C20H22178.8°171.2°
C1C10C9H2859.2°74.0°
C1C10C9H2959.7°46.8°
C10C9C8H28120.5°122.4°
C10C9C8H29120.5°119.6°
C10C9C8O172.6°172.6°
C9C10C1C61.5°68.3°
C9C10C1C2057.9°50.2°
C10C9C8H2770.2°67.3°
C10C9H28H29118.4°121.8°
C9C8OH27116.4°120.0°
C9C8OH553.8°179.4°
C8C9C10H661.0°49.9°
C8C9H28H29118.4°117.5°
OC8C9H2852.1°50.2°
OC8C9H2966.8°67.7°
C1CH2H3120.0°120.1°
C1CH2H4120.0°120.1°
C1CH3H4120.0°120.0°
CC1C10H658.0°46.5°
CC1C2H1861.2°49.1°
CC1C2H1958.5°69.3°
CC1C20H2063.1°67.9°
CC1C20H21177.0°172.1°
CC1C20H2256.9°52.0°
C20C1CH263.0°60.0°
C20C1CH357.0°180.0°
C20C1CH4177.0°60.0°
C20C1C10H6177.3°165.0°
C20C1C2H1854.7°165.0°
C20C1C2H19174.5°46.6°
C1C20H20H21120.0°120.0°
C1C20H20H22120.0°120.0°
C1C20H21H22120.0°120.0°
H2CH3H4120.0°119.9°
H5OC8H2762.6°60.7°
H6C10C9H28178.4°170.8°
H6C10C9H2959.5°68.4°
H9C13C14H1176.5°177.8°
H9C13C6H26160.6°86.9°
H10C13C14H11164.9°62.2°
H10C13C6H2680.8°153.1°
H11C14C15H1270.1°179.3°
H11C14O3H3062.0°175.2°
H12C15C16H13124.1°0.2°
H12C15C16H142.7°122.7°
H15C19H16H17120.0°120.1°
H18C2C3H2357.2°177.5°
H19C2C3H23177.0°58.7°
H20C20H21H22120.0°120.0°
H23C3C4H24176.8°179.8°
H23C3C4H2558.1°61.1°
H27C8C9H28169.3°170.3°
H27C8C9H2950.3°52.4°

248636

PDB entries from 2026-02-04

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