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VDO

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
OAYPBAsing1.61Å1.62Å
PBAOAZsing1.61Å1.60Å
PBAOAXdoub1.48Å1.49Å
PBAOAWsing1.61Å1.60Å
OAWCAGsing1.43Å1.46Å
CAGCAFsing1.53Å1.53Å
CAFCAVsing1.53Å1.54Å
CAFCAEsing1.53Å1.55Å
CAVCAAsing1.53Å1.55Å
CAEOAUsing1.43Å1.42Å
CAECACsing1.53Å1.53Å
CACOAPsing1.43Å1.45Å
CACCABsing1.53Å1.54Å
CABOAOsing1.43Å1.41Å
CABCAAsing1.53Å1.56Å
CAANANsing1.47Å1.51Å
NANCAMsing1.47Å1.50Å
CAMCALsing1.50Å1.54Å
CAMCAJsing1.53Å1.56Å
CALCAKdoub1.29Å1.40Å
CAJOATsing1.43Å1.42Å
CAJCAIsing1.53Å1.54Å
CAIOASsing1.43Å1.42Å
CAICAHsing1.53Å1.51Å
CAHOARsing1.43Å1.44Å
CAHCAKsing1.50Å1.53Å
CAKCADsing1.51Å1.52Å
CADOAQsing1.43Å1.42Å
OAYHAYsing0.97Å0.95Å
OAZHAZsing0.97Å0.95Å
CAGHAG1sing1.09Å1.10Å
CAGHAG2sing1.09Å1.10Å
CAFHAFsing1.09Å1.10Å
CAVHAV1sing1.09Å1.10Å
CAVHAV2sing1.09Å1.10Å
CAEHAEsing1.09Å1.10Å
CAAHAAsing1.09Å1.10Å
OAUHAUsing0.97Å0.95Å
CACHACsing1.09Å1.10Å
OAPHAPsing0.97Å0.95Å
CABHABsing1.09Å1.10Å
OAOHAOsing0.97Å0.95Å
NANHANsing1.01Å1.00Å
CAMHAMsing1.09Å1.10Å
CALHALsing1.08Å1.08Å
CAJHAJsing1.09Å1.10Å
OATHATsing0.97Å0.95Å
CAIHAIsing1.09Å1.10Å
OASHASsing0.97Å0.95Å
CAHHAHsing1.09Å1.10Å
OARHARsing0.97Å0.95Å
CADHAD1sing1.09Å1.10Å
CADHAD2sing1.09Å1.10Å
OAQHAQsing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
OAYPBAOAZ105.6°109.5°
OAYPBAOAX114.6°109.5°
OAYPBAOAW108.8°109.5°
PBAOAYHAY109.5°114.0°
OAZPBAOAX111.7°109.5°
OAZPBAOAW107.3°109.5°
PBAOAZHAZ109.5°114.0°
OAXPBAOAW108.5°109.5°
PBAOAWCAG118.8°123.0°
OAWCAGCAF111.0°109.4°
OAWCAGHAG1109.0°109.5°
OAWCAGHAG2108.6°109.5°
CAGCAFCAV109.7°109.5°
CAGCAFCAE111.2°109.5°
CAFCAGHAG1108.9°109.5°
CAFCAGHAG2108.6°109.5°
CAGCAFHAF108.5°109.5°
CAVCAFCAE110.2°109.5°
CAFCAVCAA110.1°109.5°
CAVCAFHAF109.5°109.5°
CAFCAVHAV1109.3°109.5°
CAFCAVHAV2109.1°109.5°
CAFCAEOAU110.4°109.5°
CAFCAECAC111.5°109.5°
CAECAFHAF107.9°109.5°
CAFCAEHAE107.6°109.5°
CAVCAACAB111.1°109.5°
CAVCAANAN110.1°109.5°
CAACAVHAV1109.3°109.4°
CAACAVHAV2109.1°109.5°
CAVCAAHAA109.7°109.5°
OAUCAECAC110.2°109.5°
OAUCAEHAE109.1°109.5°
CAEOAUHAU109.5°114.0°
CAECACOAP110.4°109.5°
CAECACCAB110.0°109.5°
CACCAEHAE107.9°109.4°
CAECACHAC108.5°109.4°
OAPCACCAB109.8°109.5°
OAPCACHAC108.9°109.4°
CACOAPHAP109.5°114.0°
CACCABOAO108.7°109.5°
CACCABCAA115.0°109.5°
CABCACHAC109.2°109.5°
CACCABHAB106.5°109.5°
OAOCABCAA110.4°109.5°
OAOCABHAB111.5°109.4°
CABOAOHAO109.5°114.1°
CABCAANAN114.2°109.5°
CABCAAHAA105.2°109.4°
CAACABHAB104.6°109.5°
CAANANCAM117.8°111.0°
NANCAAHAA106.3°109.5°
CAANANHAN106.8°111.0°
NANCAMCAL107.2°109.4°
NANCAMCAJ114.5°109.4°
CAMNANHAN106.8°111.0°
NANCAMHAM108.2°109.3°
CALCAMCAJ111.2°110.1°
CAMCALCAK124.3°124.1°
CALCAMHAM111.7°109.4°
CAMCALHAL117.8°118.0°
CAMCAJOAT109.9°109.7°
CAMCAJCAI115.9°108.5°
CAJCAMHAM103.9°109.2°
CAMCAJHAJ104.1°109.7°
CALCAKCAH123.2°124.1°
CALCAKCAD119.1°118.0°
CAKCALHAL117.9°118.0°
OATCAJCAI107.7°109.6°
OATCAJHAJ112.9°109.6°
CAJOATHAT109.5°114.0°
CAJCAIOAS109.6°109.6°
CAJCAICAH114.6°108.4°
CAICAJHAJ106.5°109.8°
CAJCAIHAI104.5°109.7°
OASCAICAH104.5°109.6°
OASCAIHAI114.5°109.6°
CAIOASHAS109.5°114.0°
CAICAHOAR108.1°109.3°
CAICAHCAK111.1°110.1°
CAHCAIHAI109.5°109.8°
CAICAHHAH109.1°109.4°
OARCAHCAK108.8°109.4°
OARCAHHAH111.4°109.3°
CAHOARHAR109.5°114.0°
CAHCAKCAD117.7°117.9°
CAKCAHHAH108.4°109.2°
CAKCADOAQ109.7°109.4°
CAKCADHAD1109.4°109.5°
CAKCADHAD2109.4°109.5°
OAQCADHAD1109.4°109.5°
OAQCADHAD2109.3°109.4°
CADOAQHAQ109.5°114.0°
HAG1CAGHAG2110.7°109.4°
HAV1CAVHAV2110.0°109.5°
HAD1CADHAD2109.6°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
OAYPBAOAZOAX125.3°120.0°
OAYPBAOAZOAW116.0°120.0°
OAYPBAOAXOAW121.9°120.0°
OAYPBAOAWCAG175.3°65.0°
OAYPBAOAZHAZ171.2°60.0°
OAZPBAOAXOAW118.0°120.0°
OAZPBAOAWCAG70.9°175.0°
OAZPBAOAYHAY5.9°60.0°
OAXPBAOAWCAG49.9°55.0°
OAXPBAOAYHAY117.4°180.0°
OAXPBAOAZHAZ63.5°60.0°
PBAOAWCAGCAF125.6°180.0°
OAWPBAOAYHAY120.9°60.1°
OAWPBAOAZHAZ55.2°180.0°
PBAOAWCAGHAG15.6°60.0°
PBAOAWCAGHAG2115.1°60.0°
OAWCAGCAFHAG1120.0°120.0°
OAWCAGCAFHAG2119.4°120.0°
OAWCAGCAFCAV64.7°175.0°
OAWCAGCAFCAE57.4°65.0°
OAWCAGHAG1HAG2119.4°120.0°
OAWCAGCAFHAF175.8°55.0°
CAGCAFCAVCAE122.7°120.0°
CAGCAFCAVHAF118.9°120.0°
CAGCAFCAEHAF118.8°120.0°
CAGCAFCAVCAA177.4°180.0°
CAGCAFCAEOAU53.9°60.0°
CAGCAFCAECAC176.8°180.0°
CAFCAGHAG1HAG2119.4°120.0°
CAGCAFCAVHAV157.4°60.0°
CAGCAFCAVHAV262.8°60.0°
CAGCAFCAEHAE65.0°60.0°
CAVCAFCAEHAF119.4°120.0°
CAFCAVCAAHAV1120.0°120.0°
CAFCAVCAAHAV2119.7°120.0°
CAVCAFCAEOAU175.7°180.0°
CAVCAFCAECAC61.4°60.0°
CAFCAVCAACAB53.4°60.0°
CAFCAVCAANAN74.1°60.0°
CAVCAFCAGHAG1175.3°55.0°
CAVCAFCAGHAG254.6°65.0°
CAFCAVHAV1HAV2119.7°120.1°
CAVCAFCAEHAE56.7°60.0°
CAFCAVCAAHAA169.3°180.0°
CAECAFCAVCAA59.9°60.0°
CAFCAEOAUCAC123.7°120.0°
CAFCAEOAUHAE118.1°120.0°
CAFCAECACHAE118.0°120.0°
CAFCAECACOAP176.0°180.0°
CAFCAECACCAB54.7°60.0°
CAECAFCAGHAG162.6°175.0°
CAECAFCAGHAG2176.7°55.0°
CAECAFCAVHAV1179.9°180.0°
CAECAFCAVHAV259.8°60.0°
CAFCAEOAUHAU167.0°180.0°
CAFCAECACHAC64.7°60.0°
CAVCAACABCAC49.5°60.0°
CAVCAACABOAO172.9°180.0°
CAVCAACABNAN125.3°120.0°
CAVCAACABHAA118.6°120.0°
CAVCAANANHAA118.7°120.0°
CAVCAANANCAM162.1°85.9°
CAACAVCAFHAF58.6°60.0°
CAACAVHAV1HAV2119.8°120.0°
CAVCAACABHAB67.0°60.0°
CAVCAANANHAN77.9°150.1°
OAUCAECACHAE119.0°120.0°
OAUCAECACOAP61.0°60.0°
OAUCAECACCAB177.7°180.0°
OAUCAECAFHAF64.9°60.0°
OAUCAECACHAC58.3°60.0°
CAECACOAPCAB121.5°120.0°
CAECACOAPHAC119.1°120.0°
CAECACCABHAC119.0°120.0°
CAECACCABOAO173.9°180.0°
CAECACCABCAA49.6°60.0°
CACCAECAFHAF58.0°60.0°
CACCAEOAUHAU69.4°60.0°
CAECACOAPHAP110.2°180.0°
CAECACCABHAB65.9°60.0°
OAPCACCABHAC119.3°120.0°
OAPCACCABOAO64.4°60.0°
OAPCACCABCAA171.3°180.0°
OAPCACCAEHAE58.0°60.0°
OAPCACCABHAB55.9°60.0°
CACCABOAOCAA127.0°120.0°
CACCABOAOHAB117.1°120.0°
CACCABCAAHAB116.5°120.0°
CACCABCAANAN75.7°60.0°
CABCACCAEHAE63.3°60.0°
CACCABCAAHAA168.1°180.0°
CABCACOAPHAP11.3°60.0°
CACCABOAOHAO108.7°60.0°
OAOCABCAAHAB120.1°120.0°
OAOCABCAANAN47.7°60.0°
OAOCABCAAHAA68.5°60.0°
OAOCABCACHAC54.9°60.0°
CABCAANANHAA115.5°120.0°
CABCAANANCAM72.1°154.1°
CABCAACAVHAV1173.4°180.0°
CABCAACAVHAV266.3°60.0°
CAACABCACHAC69.5°60.0°
CAACABOAOHAO124.2°180.0°
CABCAANANHAN47.9°30.1°
CAANANCAMHAN120.0°124.0°
CAANANCAMCAL147.3°86.7°
CAANANCAMCAJ88.8°152.6°
NANCAACAVHAV145.9°60.0°
NANCAACAVHAV2166.2°180.0°
NANCAACABHAB167.8°180.0°
CAANANCAMHAM26.6°33.1°
NANCAMCALCAJ126.0°120.2°
NANCAMCALHAM118.4°119.7°
NANCAMCAJHAM117.9°119.6°
NANCAMCALCAK120.1°137.3°
NANCAMCAJOAT31.0°49.9°
NANCAMCAJCAI91.3°169.7°
CAMNANCAAHAA43.4°34.1°
NANCAMCALHAL59.9°42.6°
NANCAMCAJHAJ152.1°70.4°
CALCAMCAJHAM120.3°120.1°
CAMCALCAKHAL180.0°179.9°
CALCAMCAJOAT152.8°70.3°
CALCAMCAJCAI30.5°49.4°
CAMCALCAKCAH1.2°0.5°
CAMCALCAKCAD179.3°179.5°
CALCAMNANHAN27.3°37.3°
CALCAMCAJHAJ86.1°169.3°
CAJCAMCALCAK5.9°17.1°
CAMCAJOATCAI127.0°119.0°
CAMCAJOATHAJ115.7°120.4°
CAMCAJCAIHAJ115.2°119.8°
CAMCAJCAIOAS169.6°52.2°
CAMCAJCAICAH52.5°67.4°
CAJCAMNANHAN151.3°83.4°
CAJCAMCALHAL174.1°162.8°
CAMCAJOATHAT91.3°180.0°
CAMCAJCAIHAI67.3°172.6°
CALCAKCAHCAI20.5°17.1°
CALCAKCAHOAR139.4°103.1°
CALCAKCAHCAD178.1°180.0°
CALCAKCADOAQ18.3°0.0°
CAKCALCAMHAM121.6°103.0°
CALCAKCAHHAH99.3°137.3°
CALCAKCADHAD1101.7°120.0°
CALCAKCADHAD2138.2°119.9°
OATCAJCAIHAJ121.4°120.4°
OATCAJCAIOAS67.0°171.9°
OATCAJCAICAH175.9°52.3°
OATCAJCAMHAM86.9°169.6°
OATCAJCAIHAI56.1°67.6°
CAJCAIOASCAH123.2°118.9°
CAJCAIOASHAI117.0°120.5°
CAJCAICAHHAI116.9°119.9°
CAJCAICAHOAR164.0°70.8°
CAJCAICAHCAK44.8°49.4°
CAICAJCAMHAM150.9°70.7°
CAICAJOATHAT35.7°61.0°
CAJCAIOASHAS165.5°179.9°
CAJCAICAHHAH74.7°169.5°
OASCAICAHHAI123.1°120.5°
OASCAICAHOAR76.0°169.5°
OASCAICAHCAK164.7°70.3°
OASCAICAJHAJ54.4°67.6°
OASCAICAHHAH45.3°49.8°
CAICAHOARCAK120.7°120.7°
CAICAHOARHAH119.8°119.7°
CAICAHCAKHAH119.8°120.2°
CAICAHCAKCAD161.3°162.9°
CAHCAICAJHAJ62.7°172.8°
CAHCAIOASHAS71.3°61.0°
CAICAHOARHAR116.0°179.9°
OARCAHCAKHAH121.3°119.7°
OARCAHCAKCAD42.5°77.0°
OARCAHCAIHAI47.1°49.1°
CAHCAKCADOAQ159.9°180.0°
CAHCAKCALHAL178.8°179.5°
CAKCAHCAIHAI72.2°169.2°
CAKCAHOARHAR4.8°59.3°
CAHCAKCADHAD180.1°60.0°
CAHCAKCADHAD240.0°60.0°
CAKCADOAQHAD1120.0°120.0°
CAKCADOAQHAD2119.9°120.0°
CADCAKCALHAL0.7°0.5°
CADCAKCAHHAH78.8°42.7°
CAKCADHAD1HAD2120.0°120.1°
CAKCADOAQHAQ41.7°180.0°
OAQCADHAD1HAD2119.9°119.9°
HAG1CAGCAFHAF55.8°65.0°
HAG2CAGCAFHAF64.9°175.0°
HAFCAFCAVHAV161.4°60.0°
HAFCAFCAVHAV2178.3°180.0°
HAFCAFCAEHAE176.2°180.0°
HAV1CAVCAAHAA70.7°60.0°
HAV2CAVCAAHAA49.6°59.9°
HAECAEOAUHAU48.9°60.0°
HAECAECACHAC177.3°180.0°
HAACAACABHAB51.7°59.9°
HAACAANANHAN163.4°89.9°
HACCACOAPHAP130.8°60.0°
HACCACCABHAB175.1°180.0°
HABCABOAOHAO8.3°60.1°
HANNANCAMHAM93.3°157.1°
HAMCAMCALHAL58.4°77.1°
HAMCAMCAJHAJ34.3°49.2°
HAJCAJOATHAT153.0°59.6°
HAJCAJCAIHAI177.5°52.8°
HAICAIOASHAS48.5°59.6°
HAICAICAHHAH168.4°70.7°
HAHCAHOARHAR124.2°60.3°
HAD1CADOAQHAQ161.7°60.0°
HAD2CADOAQHAQ78.3°60.0°

224931

PDB entries from 2024-09-11

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