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VD3

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
OC3sing1.43Å1.44Å
OHOsing0.97Å0.95Å
C1C2sing1.53Å1.49Å
C1C6sing1.52Å1.54Å
C1H11sing1.09Å1.10Å
C1H12sing1.09Å1.10Å
C2C3sing1.53Å1.60Å
C2H21sing1.09Å1.10Å
C2H22sing1.09Å1.10Å
C3C4sing1.53Å1.55Å
C3H3sing1.09Å1.10Å
C4C5sing1.52Å1.60Å
C4H41sing1.09Å1.10Å
C4H42sing1.09Å1.10Å
C5C7doub1.35Å1.38Å
C5C6sing1.48Å1.56Å
C7C8sing1.46Å1.53Å
C7H7sing1.08Å1.08Å
C8C9doub1.33Å1.40Å
C8H8sing1.08Å1.08Å
C9C10sing1.52Å1.63Å
C9C14sing1.50Å1.60Å
C10C11sing1.53Å1.49Å
C10H101sing1.09Å1.10Å
C10H102sing1.09Å1.10Å
C6C19doub1.33Å1.27Å
C11C12sing1.54Å1.58Å
C11H111sing1.09Å1.10Å
C11H112sing1.09Å1.10Å
C12C13sing1.51Å1.53Å
C12H121sing1.09Å1.10Å
C12H122sing1.09Å1.10Å
C13C14sing1.56Å1.57Å
C13C17sing1.52Å1.64Å
C13C18sing1.53Å1.60Å
C14C15sing1.53Å1.61Å
C14H14sing1.09Å1.10Å
C15C16sing1.55Å1.63Å
C15H151sing1.09Å1.10Å
C15H152sing1.09Å1.10Å
C16C17sing1.55Å1.57Å
C16H161sing1.09Å1.10Å
C16H162sing1.09Å1.10Å
C17C20sing1.53Å1.65Å
C17H17sing1.09Å1.10Å
C18H181sing1.09Å1.10Å
C18H182sing1.09Å1.10Å
C18H183sing1.09Å1.10Å
C19H191sing1.08Å1.08Å
C19H192sing1.08Å1.08Å
C20C21sing1.53Å1.52Å
C20C22sing1.53Å1.58Å
C20H20sing1.09Å1.10Å
C21H211sing1.09Å1.10Å
C21H212sing1.09Å1.10Å
C21H213sing1.09Å1.10Å
C22C23sing1.53Å1.68Å
C22H221sing1.09Å1.10Å
C22H222sing1.09Å1.10Å
C23C24sing1.53Å1.55Å
C23H231sing1.09Å1.10Å
C23H232sing1.09Å1.10Å
C24C25sing1.53Å1.54Å
C24H241sing1.09Å1.10Å
C24H242sing1.09Å1.10Å
C25C26sing1.53Å1.41Å
C25C27sing1.53Å1.44Å
C25H25sing1.09Å1.10Å
C26H261sing1.09Å1.10Å
C26H262sing1.09Å1.10Å
C26H263sing1.09Å1.10Å
C27H271sing1.09Å1.10Å
C27H272sing1.09Å1.10Å
C27H273sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C3OHO109.5°106.8°
OC3C2109.2°109.4°
OC3C4109.7°109.5°
OC3H3109.9°109.4°
C2C1C6109.8°108.3°
C2C1H11109.3°109.7°
C2C1H12109.4°109.6°
C1C2C3117.3°109.8°
C1C2H21105.1°109.4°
C1C2H22106.9°109.5°
C6C1H11109.3°109.9°
C6C1H12109.4°109.5°
C1C6C5115.4°116.5°
C1C6C19120.1°121.6°
H11C1H12109.7°109.7°
C3C2H21105.1°109.4°
C3C2H22106.9°109.4°
C2C3C4110.7°109.8°
C2C3H3109.0°109.4°
H21C2H22115.8°109.3°
C4C3H3108.4°109.4°
C3C4C5114.5°108.4°
C3C4H41106.7°109.7°
C3C4H42107.8°109.7°
C5C4H41106.7°109.7°
C5C4H42107.8°109.7°
C4C5C7120.3°121.6°
C4C5C6112.3°116.8°
H41C4H42113.5°109.6°
C7C5C6127.4°121.7°
C5C7C8141.5°120.0°
C5C7H7109.2°120.0°
C5C6C19124.5°121.8°
C8C7H7109.2°120.0°
C7C8C9123.1°120.0°
C7C8H8118.4°120.0°
C9C8H8118.4°120.0°
C8C9C1090.4°122.4°
C8C9C14127.6°122.4°
C10C9C14106.1°115.2°
C9C10C11117.5°110.8°
C9C10H101105.0°109.2°
C9C10H102106.9°109.2°
C9C14C13115.0°106.1°
C9C14C15118.0°116.7°
C9C14H1496.9°110.7°
C11C10H101105.0°109.3°
C11C10H102106.9°109.2°
C10C11C12118.6°111.7°
C10C11H111104.4°109.0°
C10C11H112106.5°109.1°
H101C10H102116.0°109.2°
C6C19H191127.6°120.0°
C6C19H192104.9°120.0°
C12C11H111104.4°109.0°
C12C11H112106.5°109.0°
C11C12C13114.9°108.2°
C11C12H121106.5°109.8°
C11C12H122107.7°109.8°
H111C11H112117.0°109.0°
C13C12H121106.4°109.4°
C13C12H122107.7°109.8°
C12C13C14112.6°107.8°
C12C13C17121.9°119.0°
C12C13C18101.9°109.3°
H121C12H122113.9°109.8°
C14C13C1795.2°103.2°
C14C13C18113.6°107.8°
C13C14C15101.6°101.4°
C13C14H14114.6°110.8°
C17C13C18112.3°109.2°
C13C17C16102.1°105.1°
C13C17C20112.6°110.3°
C13C17H17114.2°110.3°
C13C18H181109.5°109.4°
C13C18H182109.5°109.5°
C13C18H183109.5°109.5°
C15C14H14111.4°110.7°
C14C15C16104.5°102.7°
C14C15H151112.2°110.8°
C14C15H152111.2°110.7°
C16C15H151112.3°110.8°
C16C15H152111.2°110.7°
C15C16C17102.4°106.4°
C15C16H161113.4°110.0°
C15C16H162111.9°110.1°
H151C15H152105.7°110.8°
C17C16H161113.4°110.1°
C17C16H162111.9°110.1°
C16C17C20114.6°110.3°
C16C17H17112.2°110.3°
H161C16H162104.2°110.1°
C20C17H17101.6°110.3°
C17C20C21105.5°109.5°
C17C20C22120.4°109.4°
C17C20H20102.7°109.5°
H181C18H182109.5°109.4°
H181C18H183109.4°109.5°
H182C18H183109.4°109.5°
H191C19H192127.6°120.0°
C21C20C22101.3°109.5°
C21C20H20121.4°109.5°
C20C21H211109.5°109.5°
C20C21H212109.4°109.5°
C20C21H213109.5°109.5°
C22C20H20106.8°109.5°
C20C22C23109.2°109.5°
C20C22H221109.6°109.5°
C20C22H222109.6°109.5°
H211C21H212109.5°109.5°
H211C21H213109.4°109.5°
H212C21H213109.5°109.5°
C23C22H221109.6°109.5°
C23C22H222109.6°109.5°
C22C23C2497.5°109.5°
C22C23H231116.1°109.5°
C22C23H232113.7°109.5°
H221C22H222109.3°109.5°
C24C23H231116.1°109.5°
C24C23H232113.7°109.5°
C23C24C25123.0°109.5°
C23C24H241102.0°109.5°
C23C24H242105.2°109.5°
H231C23H232100.7°109.5°
C25C24H241102.0°109.4°
C25C24H242105.2°109.5°
C24C25C2690.7°109.5°
C24C25C27130.3°109.4°
C24C25H25105.3°109.5°
H241C24H242120.9°109.5°
C26C25C2790.5°109.5°
C26C25H25139.4°109.5°
C25C26H261109.5°109.4°
C25C26H262109.5°109.5°
C25C26H263109.5°109.5°
C27C25H25105.5°109.4°
C25C27H271109.5°109.5°
C25C27H272109.5°109.5°
C25C27H273109.5°109.5°
H261C26H262109.4°109.5°
H261C26H263109.5°109.4°
H262C26H263109.5°109.5°
H271C27H272109.5°109.4°
H271C27H273109.5°109.5°
H272C27H273109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
OC3C2C1114.8°173.7°
OC3C2C4120.9°120.1°
OC3C2H3120.0°119.8°
OC3C2H21128.9°53.6°
OC3C2H225.2°66.2°
OC3C4H3120.0°119.9°
OC3C4C5164.1°177.7°
OC3C4H4178.1°62.5°
OC3C4H4244.1°58.0°
HOOC3C298.9°179.7°
HOOC3C422.5°60.0°
HOOC3H3141.6°59.9°
C2C1C6H11119.9°119.8°
C2C1C6H12120.0°119.5°
C2C1H11H12119.9°120.5°
C1C2C3H21116.3°120.1°
C1C2C3H22120.0°120.1°
C1C2H21H22117.8°119.9°
C1C2C3C46.1°66.2°
C1C2C3H3125.2°53.9°
C2C1C6C552.3°47.0°
C2C1C6C19128.6°133.4°
C6C1H11H12119.9°120.5°
C6C1C2C353.8°57.9°
C6C1C2H2162.5°178.0°
C6C1C2H22173.8°62.2°
C1C6C5C44.4°43.5°
C1C6C5C7176.6°136.8°
C1C6C5C19179.1°179.5°
C1C6C19H191179.6°0.1°
C1C6C19H1920.4°180.0°
H11C1C2C366.0°62.1°
H11C1C2H21177.6°58.0°
H11C1C2H2254.0°177.8°
H11C1C6C567.6°72.8°
H11C1C6C19111.5°106.7°
H12C1C2C3173.8°177.4°
H12C1C2H2157.5°62.5°
H12C1C2H2266.2°57.3°
H12C1C6C5172.3°166.5°
H12C1C6C198.6°13.9°
C3C2H21H22117.8°119.8°
C2C3C4H3119.4°120.1°
C2C3C4C543.6°57.6°
C2C3C4H41161.4°177.4°
C2C3C4H4276.4°62.1°
H21C2C3C4110.3°173.7°
H21C2C3H38.8°66.3°
H22C2C3C4126.1°53.9°
H22C2C3H3114.8°174.0°
C3C4C5H41117.8°119.8°
C3C4C5H42120.0°119.7°
C3C4H41H42118.6°120.5°
C3C4C5C7134.4°133.4°
C3C4C5C644.6°46.8°
H3C3C4C575.8°62.4°
H3C3C4H4141.9°57.4°
H3C3C4H42164.2°177.9°
C5C4H41H42118.6°120.5°
C4C5C7C6178.8°179.7°
C4C5C7C881.5°0.0°
C4C5C7H798.5°179.9°
C4C5C6C19176.5°137.0°
H41C4C5C716.6°13.6°
H41C4C5C6162.4°166.6°
H42C4C5C7105.6°106.9°
H42C4C5C675.4°72.9°
C5C7C8H7180.0°179.9°
C5C7C8C966.9°180.0°
C5C7C8H8113.2°0.1°
C7C5C6C192.4°42.8°
C6C5C7C897.3°179.7°
C6C5C7H782.7°0.4°
C5C6C19H1910.5°179.6°
C5C6C19H192179.5°0.5°
C7C8C9H8180.0°179.9°
C7C8C9C1084.9°0.0°
C7C8C9C1425.9°179.9°
H7C7C8C9113.1°0.1°
H7C7C8H866.8°180.0°
C8C9C10C14129.6°180.0°
C8C9C10C11146.7°129.7°
C8C9C10H10197.1°109.9°
C8C9C10H10226.7°9.4°
C8C9C14C13161.7°122.3°
C8C9C14C1578.4°10.3°
C8C9C14H1440.4°117.4°
H8C8C9C1095.1°179.9°
H8C8C9C14154.1°0.0°
C9C10C11H101116.3°120.3°
C9C10C11H102120.0°120.3°
C9C10H101H102117.7°119.3°
C9C10C11C1230.0°48.6°
C9C10C11H111145.7°169.1°
C9C10C11H11289.9°71.9°
C10C9C14C1358.3°57.7°
C10C9C14C15178.2°169.6°
C10C9C14H1463.0°62.6°
C14C9C10C1117.1°50.2°
C14C9C10H101133.4°70.1°
C14C9C10H102102.9°170.5°
C9C14C13C1250.7°65.5°
C9C14C13C15128.6°122.3°
C9C14C13H14111.1°120.2°
C9C14C13C17178.4°167.7°
C9C14C13C1864.5°52.3°
C9C14C15H14110.8°127.8°
C9C14C15C16159.9°156.8°
C9C14C15H15178.3°84.9°
C9C14C15H15239.9°38.5°
C11C10H101H102117.8°119.4°
C10C11C12H111115.6°120.5°
C10C11C12H112120.0°120.6°
C10C11H111H112117.4°119.0°
C10C11C12C1340.1°58.8°
C10C11C12H12177.4°60.5°
C10C11C12H122160.1°178.6°
H101C10C11C1286.2°71.7°
H101C10C11H11129.4°48.8°
H101C10C11H112153.8°167.8°
H102C10C11C12150.0°168.9°
H102C10C11H11194.4°70.6°
H102C10C11H11230.0°48.4°
C6C19H191H192180.0°179.9°
C12C11H111H112117.4°118.9°
C11C12C13H121117.6°119.6°
C11C12C13H122120.0°119.8°
C11C12H121H122118.5°120.9°
C11C12C13C140.5°67.2°
C11C12C13C17112.5°176.0°
C11C12C13C18121.6°49.7°
H111C11C12C13155.8°179.4°
H111C11C12H12138.2°60.1°
H111C11C12H12284.2°60.8°
H112C11C12C1379.9°61.7°
H112C11C12H121162.6°179.0°
H112C11C12H12240.2°58.1°
C13C12H121H122118.5°120.6°
C12C13C14C17127.7°126.8°
C12C13C14C18115.2°117.8°
C12C13C17C18121.1°126.4°
C12C13C14C15179.3°172.2°
C12C13C14H1460.4°54.6°
C12C13C17C16176.4°149.3°
C12C13C17C2060.2°91.7°
C12C13C17H1755.1°30.4°
C12C13C18H18146.7°59.3°
C12C13C18H18273.3°179.3°
C12C13C18H183166.7°60.7°
H121C12C13C14118.0°52.4°
H121C12C13C17130.0°64.4°
H121C12C13C184.0°169.3°
H122C12C13C14119.5°173.0°
H122C12C13C177.5°56.2°
H122C12C13C18118.4°70.1°
C14C13C17C18118.2°114.4°
C13C14C15H14122.5°117.6°
C13C14C15C1633.2°42.2°
C13C14C15H151155.1°160.5°
C13C14C15H15286.8°76.1°
C14C13C17C1655.6°30.1°
C14C13C17C20179.1°149.0°
C14C13C17H1765.7°88.8°
C14C13C18H18174.7°57.5°
C14C13C18H182165.3°62.4°
C14C13C18H18345.3°177.5°
C17C13C14C1553.0°45.4°
C17C13C14H1467.3°72.1°
C13C17C16C1535.3°4.0°
C13C17C16C20122.1°118.9°
C13C17C16H17122.7°118.9°
C13C17C16H161157.9°123.1°
C13C17C16H16284.7°115.3°
C13C17C20H17122.6°122.2°
C17C13C18H181178.7°168.9°
C17C13C18H18258.7°49.0°
C17C13C18H18361.3°71.1°
C13C17C20C21131.3°61.4°
C13C17C20C22115.2°178.6°
C13C17C20H203.2°58.5°
C18C13C14C1564.1°70.0°
C18C13C14H14175.6°172.5°
C18C13C17C1662.5°84.3°
C18C13C17C2060.9°34.6°
C18C13C17H17176.2°156.8°
C13C18H181H182120.0°120.0°
C13C18H181H183120.0°120.0°
C13C18H182H183120.0°120.0°
C14C15C16H151121.8°118.4°
C14C15C16H152120.0°118.3°
C14C15H151H152121.3°123.4°
C14C15C16C172.2°24.1°
C14C15C16H161124.7°95.1°
C14C15C16H162117.8°143.4°
H14C14C15C1689.3°75.4°
H14C14C15H15132.5°42.9°
H14C14C15H152150.7°166.3°
C16C15H151H152121.3°123.3°
C15C16C17H161122.5°119.2°
C15C16C17H162120.0°119.3°
C15C16H161H162121.9°121.5°
C15C16C17C20157.4°122.9°
C15C16C17H1787.4°115.0°
H151C15C16C17119.6°142.5°
H151C15C16H1612.9°23.3°
H151C15C16H162120.4°98.3°
H152C15C16C17122.2°94.2°
H152C15C16H161115.3°146.6°
H152C15C16H1622.2°25.1°
C17C16H161H162121.9°121.5°
C16C17C20H17121.2°122.2°
C16C17C20C21112.5°177.1°
C16C17C20C220.9°62.9°
C16C17C20H20119.4°57.1°
H161C16C17C2080.1°118.0°
H161C16C17H1735.1°4.2°
H162C16C17C2037.4°3.6°
H162C16C17H17152.6°125.7°
C17C20C21C22126.2°120.0°
C17C20C21H20115.9°120.0°
C17C20C22H20116.3°120.0°
C17C20C21H2113.0°60.0°
C17C20C21H212123.0°60.0°
C17C20C21H213116.9°180.0°
C17C20C22C23129.8°175.0°
C17C20C22H221110.1°65.0°
C17C20C22H2229.8°55.0°
H17C17C20C218.6°60.7°
H17C17C20C22122.1°59.3°
H17C17C20H20119.4°179.3°
H181C18H182H183120.0°120.0°
C21C20C22H20128.0°120.0°
C20C21H211H212120.0°120.0°
C20C21H211H213120.0°120.0°
C20C21H212H213120.1°120.0°
C21C20C22C23114.5°65.0°
C21C20C22H2215.6°55.0°
C21C20C22H222125.5°175.0°
C22C20C21H211123.2°60.0°
C22C20C21H2123.2°180.0°
C22C20C21H213116.8°60.0°
C20C22C23H221120.1°120.0°
C20C22C23H222120.0°120.0°
C20C22H221H222120.1°120.0°
C20C22C23C24122.4°NaN°
C20C22C23H231113.6°60.0°
C20C22C23H2322.4°60.0°
H20C20C21H211118.9°180.0°
H20C20C21H212121.1°60.0°
H20C20C21H2131.1°60.0°
H20C20C22C2313.5°55.0°
H20C20C22H221133.6°175.0°
H20C20C22H222106.5°65.0°
H211C21H212H213119.9°120.0°
C23C22H221H222120.1°120.0°
C22C23C24H231123.9°120.0°
C22C23C24H232120.0°120.0°
C22C23H231H232123.2°120.0°
C22C23C24C25121.1°180.0°
C22C23C24H241125.9°60.0°
C22C23C24H2421.1°60.0°
H221C22C23C242.3°60.0°
H221C22C23H231126.3°180.0°
H221C22C23H232117.7°60.0°
H222C22C23C24117.5°60.0°
H222C22C23H2316.4°60.0°
H222C22C23H232122.4°180.0°
C24C23H231H232123.1°120.0°
C23C24C25H241113.0°120.0°
C23C24C25H242120.0°120.0°
C23C24H241H242116.0°120.1°
C23C24C25C26131.1°175.0°
C23C24C25C27137.7°65.0°
C23C24C25H2511.1°55.0°
H231C23C24C252.9°60.0°
H231C23C24H241110.2°180.0°
H231C23C24H242122.9°60.0°
H232C23C24C25118.9°60.0°
H232C23C24H2415.9°60.0°
H232C23C24H242121.1°180.0°
C25C24H241H242116.0°119.9°
C24C25C26C27130.4°120.0°
C24C25C26H25114.8°120.0°
C24C25C27H25126.5°120.0°
C24C25C26H26155.0°180.0°
C24C25C26H262174.9°60.0°
C24C25C26H26365.0°60.1°
C24C25C27H27175.3°60.0°
C24C25C27H27244.7°179.9°
C24C25C27H273164.7°60.0°
H241C24C25C26115.9°65.0°
H241C24C25C2724.7°55.0°
H241C24C25H25101.9°174.9°
H242C24C25C2611.1°54.9°
H242C24C25C27102.3°175.0°
H242C24C25H25131.1°65.1°
C26C25C27H25142.2°120.0°
C25C26H261H262120.0°120.0°
C25C26H261H263120.0°119.9°
C25C26H262H263120.0°120.1°
C26C25C27H271166.6°180.0°
C26C25C27H27246.6°60.1°
C26C25C27H27373.4°60.0°
C27C25C26H261174.7°60.0°
C27C25C26H26254.7°180.0°
C27C25C26H26365.3°59.9°
C25C27H271H272120.0°120.0°
C25C27H271H273120.0°120.0°
C25C27H272H273120.0°120.1°
H25C25C26H26159.8°60.0°
H25C25C26H26260.1°60.0°
H25C25C26H263179.8°179.9°
H25C25C27H27151.2°60.0°
H25C25C27H272171.2°60.0°
H25C25C27H27368.8°180.0°
H261C26H262H263120.0°120.0°
H271C27H272H273120.0°120.0°

247536

PDB entries from 2026-01-14

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