Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

VCN

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C7C6doub1.38Å1.39ÅAromatic
C7C8sing1.39Å1.39ÅAromatic
C6C5sing1.39Å1.39ÅAromatic
C8C9doub1.39Å1.38ÅAromatic
C5C4doub1.39Å1.40ÅAromatic
C9C4sing1.41Å1.40ÅAromatic
C9C1sing1.48Å1.49Å
C13C12sing1.53Å1.51Å
C4C3sing1.48Å1.47Å
C1O1doub1.21Å1.21Å
C1C2sing1.48Å1.50Å
O2C11doub1.22Å1.23Å
C12N1sing1.46Å1.47Å
C3C2doub1.40Å1.42ÅAromatic
C3C10sing1.40Å1.39ÅAromatic
C15C14sing1.53Å1.51Å
C11N1sing1.35Å1.35Å
C11C10sing1.48Å1.50Å
N1C14sing1.46Å1.47Å
C2C18sing1.39Å1.38ÅAromatic
C10C16doub1.40Å1.40ÅAromatic
C18C17doub1.39Å1.39ÅAromatic
C16C17sing1.38Å1.39ÅAromatic
C12H6sing1.09Å1.10Å
C12H5sing1.09Å1.10Å
C13H8sing1.09Å1.10Å
C13H9sing1.09Å1.10Å
C13H7sing1.09Å1.10Å
C14H11sing1.09Å1.10Å
C14H10sing1.09Å1.10Å
C15H13sing1.09Å1.10Å
C15H14sing1.09Å1.10Å
C15H12sing1.09Å1.10Å
C16H15sing1.08Å1.08Å
C17H16sing1.08Å1.08Å
C18H17sing1.08Å1.08Å
C5H1sing1.08Å1.08Å
C6H2sing1.08Å1.08Å
C7H3sing1.08Å1.08Å
C8H4sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C6C7C8121.0°120.3°
C7C6C5120.8°120.4°
C7C6H2119.6°119.8°
C6C7H3119.5°119.9°
C7C8C9118.2°119.9°
C8C7H3119.5°119.8°
C7C8H4120.9°120.1°
C6C5C4118.7°120.0°
C6C5H1120.7°119.9°
C5C6H2119.6°119.8°
C8C9C4121.5°119.9°
C8C9C1129.2°132.3°
C9C8H4120.9°120.1°
C5C4C9119.8°119.5°
C5C4C3131.4°131.9°
C4C5H1120.7°120.0°
C4C9C1109.2°107.8°
C9C4C3108.8°108.6°
C9C1O1127.6°126.5°
C9C1C2105.0°107.0°
C13C12N1113.2°109.5°
C13C12H6108.5°109.4°
C13C12H5108.5°109.5°
C12C13H8109.5°109.5°
C12C13H9109.4°109.5°
C12C13H7109.5°109.4°
C4C3C2108.7°108.7°
C4C3C10131.3°131.9°
O1C1C2127.4°126.5°
C1C2C3108.3°107.9°
C1C2C18130.9°132.2°
O2C11N1121.7°120.0°
O2C11C10119.5°120.0°
C12N1C11120.1°120.0°
C12N1C14118.0°120.0°
N1C12H6108.5°109.5°
N1C12H5108.5°109.5°
C2C3C10120.0°119.4°
C3C2C18120.9°119.9°
C3C10C11120.4°120.1°
C3C10C16118.5°119.7°
C15C14N1113.9°109.5°
C15C14H11108.3°109.4°
C15C14H10108.3°109.5°
C14C15H13109.5°109.5°
C14C15H14109.4°109.5°
C14C15H12109.4°109.5°
N1C11C10118.8°120.0°
C11N1C14121.9°120.0°
C11C10C16121.2°120.2°
N1C14H11108.4°109.5°
N1C14H10108.3°109.5°
C2C18C17118.7°120.2°
C2C18H17120.7°119.9°
C10C16C17121.0°120.3°
C10C16H15119.5°119.9°
C18C17C16121.0°120.5°
C18C17H16119.5°119.8°
C17C18H17120.7°119.9°
C17C16H15119.5°119.9°
C16C17H16119.5°119.7°
H6C12H5109.5°109.4°
H8C13H9109.5°109.5°
H8C13H7109.5°109.5°
H9C13H7109.5°109.5°
H11C14H10109.5°109.4°
H13C15H14109.5°109.4°
H13C15H12109.5°109.4°
H14C15H12109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C6C7C8H3180.0°179.9°
C7C6C5H2180.0°180.0°
C6C7C8C90.1°0.4°
C7C6C5C40.2°0.0°
C7C6C5H1179.8°180.0°
C6C7C8H4179.9°180.0°
C8C7C6C50.0°0.0°
C7C8C9H4180.0°179.6°
C7C8C9C40.3°0.7°
C7C8C9C1179.8°179.6°
C8C7C6H2180.0°179.9°
C6C5C4H1180.0°180.0°
C6C5C4C90.4°0.3°
C6C5C4C3179.8°180.0°
C5C6C7H3180.0°180.0°
C8C9C4C50.5°0.7°
C8C9C4C1179.6°179.1°
C8C9C4C3180.0°179.6°
C8C9C1O10.5°0.8°
C8C9C1C2179.9°179.4°
C9C8C7H3179.9°179.7°
C5C4C9C3179.5°179.8°
C5C4C9C1179.9°179.8°
C5C4C3C2179.4°180.0°
C5C4C3C100.2°0.0°
C4C5C6H2179.8°180.0°
C4C9C1O1179.0°179.8°
C4C9C1C20.6°0.4°
C9C4C3C20.0°0.3°
C9C4C3C10179.6°179.7°
C9C4C5H1179.6°179.7°
C4C9C8H4179.7°179.6°
C1C9C4C30.4°0.4°
C9C1O1C2179.5°179.7°
C9C1C2C30.6°0.2°
C9C1C2C18179.8°179.8°
C1C9C8H40.2°0.7°
C13C12N1H6120.5°120.0°
C13C12N1H5120.5°120.0°
C13C12N1C1179.5°90.0°
C13C12N1C14100.4°90.0°
C13C12H6H5118.3°119.9°
C12C13H8H9120.0°120.0°
C12C13H8H7120.0°119.9°
C12C13H9H7120.0°119.9°
C4C3C2C10.3°0.0°
C4C3C2C10179.7°180.0°
C4C3C10C111.0°0.0°
C4C3C2C18180.0°180.0°
C4C3C10C16180.0°179.9°
C3C4C5H10.2°0.0°
O1C1C2C3179.0°180.0°
O1C1C2C180.6°0.0°
C1C2C3C18179.7°180.0°
C1C2C3C10180.0°180.0°
C1C2C18C17179.8°180.0°
C1C2C18H170.2°0.0°
O2C11N1C128.3°4.4°
O2C11C10C391.2°59.0°
O2C11N1C10179.9°179.9°
O2C11N1C14171.5°175.6°
O2C11C10C1687.9°121.1°
C12N1C14C1521.5°95.9°
C12N1C11C14179.8°180.0°
C12N1C11C10171.5°175.7°
N1C12H6H5118.3°120.0°
N1C12C13H8180.0°180.0°
N1C12C13H960.0°60.0°
N1C12C13H760.0°60.0°
C12N1C14H11142.2°24.1°
C12N1C14H1099.1°144.0°
C2C3C10C11179.4°180.0°
C2C3C10C160.3°0.1°
C3C2C18C170.2°0.0°
C3C2C18H17179.8°180.0°
C3C10C11N189.0°121.1°
C3C10C11C16179.0°179.9°
C10C3C2C180.3°0.0°
C3C10C16C170.3°0.1°
C3C10C16H15179.7°180.0°
C15C14N1C11158.3°84.1°
C15C14N1H11120.6°120.0°
C15C14N1H10120.6°120.1°
C15C14H11H10117.9°120.0°
C14C15H13H14120.0°120.0°
C14C15H13H12120.0°120.1°
C14C15H14H12120.0°120.1°
N1C11C10C1692.0°58.8°
C11N1C12H6160.0°30.0°
C11N1C12H541.1°150.0°
C11N1C14H1137.7°155.9°
C11N1C14H1081.0°36.0°
C10C11N1C148.6°4.3°
C11C10C16C17179.4°180.0°
C11C10C16H150.6°0.1°
C14N1C12H620.2°150.0°
C14N1C12H5139.1°30.0°
N1C14H11H10118.0°120.0°
N1C14C15H13180.0°60.0°
N1C14C15H1460.0°60.0°
N1C14C15H1260.0°180.0°
C2C18C17H17180.0°180.0°
C2C18C17C160.1°0.1°
C2C18C17H16179.8°180.0°
C10C16C17C180.2°0.0°
C10C16C17H15180.0°179.9°
C10C16C17H16179.8°179.9°
C18C17C16H16180.0°179.9°
C18C17C16H15179.8°179.9°
C16C17C18H17179.8°180.0°
H6C12C13H859.4°59.9°
H6C12C13H960.6°60.0°
H6C12C13H7179.5°179.9°
H5C12C13H859.5°60.0°
H5C12C13H9179.5°180.0°
H5C12C13H760.6°60.0°
H8C13H9H7120.0°120.1°
H11C14C15H1359.3°60.0°
H11C14C15H1460.7°180.0°
H11C14C15H12179.3°60.0°
H10C14C15H1359.4°180.0°
H10C14C15H14179.4°60.1°
H10C14C15H1260.6°59.9°
H13C15H14H12120.0°119.9°
H15C16C17H160.2°0.0°
H16C17C18H170.2°0.1°
H1C5C6H20.2°0.0°
H2C6C7H30.0°0.0°
H3C7C8H40.1°0.0°

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon