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SummaryGeometryRelated PDB entries

VCL

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
CL1C03sing1.74Å1.76Å
C03C02doub1.38Å1.38ÅAromatic
C03C04sing1.38Å1.38ÅAromatic
C02C01sing1.38Å1.40ÅAromatic
C04C05doub1.38Å1.40ÅAromatic
C01C06doub1.38Å1.41ÅAromatic
C05C06sing1.38Å1.40ÅAromatic
C06C07sing1.51Å1.55Å
C18N19doub1.30Å1.38ÅAromatic
C18N17sing1.35Å1.35ÅAromatic
N19C15sing1.34Å1.38ÅAromatic
N17C16sing1.37Å1.39ÅAromatic
C07N08sing1.46Å1.48Å
C15C16doub1.35Å1.38ÅAromatic
C15C14sing1.51Å1.46Å
S11C12sing1.81Å1.84Å
S11C09sing1.76Å1.85Å
N08C09doub1.30Å1.29Å
C13C14sing1.53Å1.52Å
C13C12sing1.53Å1.52Å
C09N10sing1.38Å1.38Å
C16H1sing1.08Å1.08Å
C18H2sing1.08Å1.08Å
C01H3sing1.08Å1.08Å
C02H4sing1.08Å1.08Å
C04H5sing1.08Å1.08Å
C05H6sing1.08Å1.08Å
C07H7sing1.09Å1.10Å
C07H8sing1.09Å1.10Å
N10H10sing0.97Å1.00Å
C12H11sing1.09Å1.10Å
C12H12sing1.09Å1.10Å
C13H13sing1.09Å1.10Å
C13H14sing1.09Å1.10Å
C14H15sing1.09Å1.10Å
C14H16sing1.09Å1.10Å
N17H17sing0.97Å1.00Å
N10H9sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
CL1C03C02119.5°120.0°
CL1C03C04119.4°120.0°
C02C03C04121.1°120.0°
C03C02C01118.7°120.0°
C03C02H4120.7°120.0°
C03C04C05118.9°120.0°
C03C04H5120.6°120.0°
C02C01C06122.7°120.0°
C02C01H3118.7°120.1°
C01C02H4120.7°120.0°
C04C05C06122.7°120.0°
C05C04H5120.5°120.0°
C04C05H6118.7°120.0°
C01C06C05116.0°120.1°
C01C06C07122.0°120.0°
C06C01H3118.7°120.0°
C05C06C07122.0°120.0°
C06C05H6118.7°120.0°
C06C07N08114.1°109.5°
C06C07H7108.3°109.5°
C06C07H8108.3°109.5°
N19C18N17110.2°108.7°
C18N19C15108.1°109.2°
N19C18H2124.9°125.6°
C18N17C16105.6°107.2°
N17C18H2124.9°125.7°
C18N17H17127.2°126.4°
N19C15C16105.6°108.0°
N19C15C14123.0°126.0°
N17C16C15110.5°106.8°
N17C16H1124.8°126.7°
C16N17H17127.2°126.4°
C07N08C09122.7°120.0°
N08C07H7108.3°109.5°
N08C07H8108.3°109.5°
C16C15C14131.4°126.0°
C15C16H1124.8°126.6°
C15C14C13113.3°109.5°
C15C14H15108.5°109.4°
C15C14H16108.5°109.5°
C12S11C09112.5°100.0°
S11C12C13113.2°109.5°
S11C12H11108.6°109.4°
S11C12H12108.5°109.5°
S11C09N08121.2°120.0°
S11C09N10116.4°120.0°
N08C09N10122.4°120.0°
C14C13C12113.1°109.5°
C14C13H13108.5°109.5°
C14C13H14108.6°109.5°
C13C14H15108.5°109.5°
C13C14H16108.5°109.5°
C13C12H11108.5°109.4°
C13C12H12108.6°109.5°
C12C13H13108.6°109.5°
C12C13H14108.5°109.5°
C09N10H10120.0°119.9°
C09N10H9120.0°120.1°
H7C07H8109.5°109.4°
H10N10H9120.0°120.0°
H11C12H12109.5°109.5°
H13C13H14109.5°109.4°
H15C14H16109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
CL1C03C02C04179.9°179.9°
CL1C03C02C01179.9°179.9°
CL1C03C04C05179.9°179.9°
CL1C03C02H40.1°0.0°
CL1C03C04H50.1°0.1°
C03C02C01H4180.0°179.9°
C02C03C04C050.0°0.0°
C03C02C01C060.0°0.1°
C03C02C01H3180.0°179.7°
C02C03C04H5180.0°180.0°
C04C03C02C010.1°0.0°
C03C04C05H5180.0°180.0°
C03C04C05C060.0°0.0°
C04C03C02H4180.0°180.0°
C03C04C05H6180.0°180.0°
C02C01C06H3180.0°179.6°
C02C01C06C050.0°0.1°
C02C01C06C07179.8°179.7°
C04C05C06C010.1°0.1°
C04C05C06H6180.0°179.9°
C04C05C06C07179.8°179.7°
C01C06C05C07179.8°179.8°
C01C06C07N08155.8°85.0°
C06C01C02H4180.0°180.0°
C01C06C05H6180.0°180.0°
C01C06C07H735.1°155.0°
C01C06C07H883.5°35.1°
C05C06C07N0824.5°95.2°
C05C06C01H3180.0°179.7°
C06C05C04H5180.0°180.0°
C05C06C07H7145.1°24.8°
C05C06C07H896.2°144.8°
C06C07N08H7120.7°120.1°
C06C07N08H8120.7°120.0°
C06C07N08C0977.8°115.5°
C07C06C01H30.2°0.1°
C07C06C05H60.2°0.2°
C06C07H7H8117.9°120.0°
N19C18N17H2180.0°179.6°
N19C18N17C160.0°0.3°
C18N19C15C160.2°0.4°
C18N19C15C14180.0°179.8°
N19C18N17H17180.0°179.9°
N17C18N19C150.2°0.4°
C18N17C16H17180.0°179.8°
C18N17C16C150.2°0.0°
C18N17C16H1179.9°180.0°
N19C15C16N170.2°0.3°
N19C15C16C14179.7°179.7°
N19C15C14C1310.6°54.7°
N19C15C16H1179.8°179.7°
C15N19C18H2179.8°180.0°
N19C15C14H15110.0°65.3°
N19C15C14H16131.2°174.7°
N17C16C15H1180.0°180.0°
N17C16C15C14179.9°180.0°
C16N17C18H2180.0°179.8°
C07N08C09S110.3°5.5°
C07N08C09N10179.8°174.5°
N08C07H7H8117.9°120.0°
C16C15C14C13169.0°125.0°
C16C15C14H1570.4°115.0°
C16C15C14H1648.5°5.0°
C15C16N17H17179.9°179.8°
C15C14C13H15120.6°120.0°
C15C14C13H16120.6°120.0°
C15C14C13C1274.3°180.0°
C14C15C16H10.1°0.0°
C15C14C13H1346.2°60.0°
C15C14C13H14165.2°60.0°
C15C14H15H16118.3°120.0°
C12S11C09N0880.8°174.7°
S11C12C13C14172.6°180.0°
S11C12C13H11120.6°119.9°
S11C12C13H12120.5°120.1°
C12S11C09N1098.7°5.2°
S11C12H11H12118.3°120.0°
S11C12C13H1352.1°60.0°
S11C12C13H1466.9°60.0°
S11C09N08N10179.5°179.9°
C09S11C12C13173.4°175.1°
S11C09N10H10179.5°179.9°
C09S11C12H1166.1°55.1°
C09S11C12H1252.8°64.9°
S11C09N10H90.4°0.0°
C09N08C07H742.8°4.5°
C09N08C07H8161.5°124.5°
N08C09N10H100.0°0.0°
N08C09N10H9180.0°180.0°
C14C13C12H13120.5°120.0°
C14C13C12H14120.6°120.0°
C14C13C12H1152.0°60.0°
C14C13C12H1266.9°59.9°
C14C13H13H14118.3°120.0°
C13C14H15H16118.3°120.0°
C13C12H11H12118.3°120.0°
C12C13H13H14118.3°120.0°
C12C13C14H15165.1°60.0°
C12C13C14H1646.3°60.0°
C09N10H10H9180.0°180.0°
H1C16N17H170.1°0.2°
H2C18N17H170.0°0.4°
H3C01C02H40.0°0.4°
H5C04C05H60.0°0.0°
H11C12C13H1368.5°179.9°
H11C12C13H14172.6°60.0°
H12C12C13H13172.6°60.1°
H12C12C13H1453.7°180.0°
H13C13C14H1574.3°60.0°
H13C13C14H16166.8°180.0°
H14C13C14H1544.6°179.9°
H14C13C14H1674.3°60.1°

225399

PDB entries from 2024-09-25

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