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VBX

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O1C9doub1.22Å1.20Å
C9N2sing1.35Å1.39Å
C9C8sing1.47Å1.48Å
N2C10sing1.47Å1.46Å
C7C8doub1.40Å1.38ÅAromatic
C7C6sing1.38Å1.38ÅAromatic
C8C3sing1.40Å1.40ÅAromatic
C6C5doub1.38Å1.39ÅAromatic
C3N1sing1.39Å1.37Å
C3C4doub1.39Å1.41ÅAromatic
N1C2sing1.46Å1.46Å
C5C4sing1.38Å1.37ÅAromatic
C2C1sing1.51Å1.54Å
OC1doub1.21Å1.21Å
C1Nsing1.35Å1.38Å
NCsing1.47Å1.44Å
N1H1sing0.97Å1.00Å
C7H2sing1.08Å1.08Å
N2H3sing0.97Å1.00Å
C5H4sing1.08Å1.08Å
C6H5sing1.08Å1.08Å
C4H6sing1.08Å1.08Å
C2H7sing1.09Å1.10Å
C2H8sing1.09Å1.10Å
C10H9sing1.09Å1.10Å
C10H10sing1.09Å1.10Å
C10H11sing1.09Å1.10Å
NH12sing0.97Å1.00Å
CH13sing1.09Å1.10Å
CH14sing1.09Å1.10Å
CH15sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O1C9N2120.2°120.0°
O1C9C8122.2°120.0°
N2C9C8117.6°120.0°
C9N2C10122.4°120.0°
C9N2H3118.8°120.0°
C9C8C7117.1°120.2°
C9C8C3123.1°120.2°
C10N2H3118.8°120.0°
N2C10H9109.5°109.4°
N2C10H10109.5°109.5°
N2C10H11109.5°109.5°
C8C7C6120.8°119.9°
C7C8C3119.8°119.6°
C8C7H2119.6°120.0°
C7C6C5119.8°120.4°
C6C7H2119.6°120.1°
C7C6H5120.1°119.8°
C8C3N1120.5°120.2°
C8C3C4118.6°119.6°
C6C5C4120.5°120.4°
C6C5H4119.8°119.8°
C5C6H5120.1°119.8°
N1C3C4120.6°120.2°
C3N1C2118.8°120.0°
C3N1H1107.1°119.9°
C3C4C5120.5°120.1°
C3C4H6119.7°120.0°
N1C2C1106.9°109.5°
C2N1H1107.1°120.0°
N1C2H7110.1°109.5°
N1C2H8110.1°109.5°
C4C5H4119.7°119.8°
C5C4H6119.8°119.9°
C2C1O122.8°120.0°
C2C1N117.3°120.0°
C1C2H7110.1°109.5°
C1C2H8110.1°109.5°
OC1N119.9°120.0°
C1NC120.9°120.0°
C1NH12119.5°120.0°
CNH12119.5°120.0°
NCH13109.5°109.5°
NCH14109.5°109.5°
NCH15109.5°109.5°
H7C2H8109.5°109.4°
H9C10H10109.4°109.5°
H9C10H11109.5°109.5°
H10C10H11109.5°109.5°
H13CH14109.4°109.5°
H13CH15109.5°109.4°
H14CH15109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O1C9N2C8179.0°180.0°
O1C9N2C10178.4°0.0°
O1C9C8C762.6°174.1°
O1C9C8C3118.2°5.9°
O1C9N2H31.6°180.0°
C9N2C10H3180.0°179.9°
N2C9C8C7116.4°5.9°
N2C9C8C362.9°174.0°
C9N2C10H9180.0°60.0°
C9N2C10H1060.0°180.0°
C9N2C10H1160.0°60.0°
C8C9N2C100.6°180.0°
C9C8C7C3179.3°179.9°
C9C8C7C6179.1°180.0°
C9C8C3N14.9°0.1°
C9C8C3C4179.3°180.0°
C9C8C7H20.9°0.3°
C8C9N2H3179.4°0.1°
N2C10H9H10120.0°120.0°
N2C10H9H11120.0°119.9°
N2C10H10H11120.0°120.0°
C8C7C6H2180.0°179.7°
C8C7C6C50.3°0.0°
C7C8C3N1174.3°180.0°
C7C8C3C40.1°0.1°
C8C7C6H5179.7°180.0°
C6C7C8C30.1°0.0°
C7C6C5H5180.0°180.0°
C7C6C5C40.2°0.0°
C7C6C5H4179.8°180.0°
C8C3N1C4174.3°179.9°
C8C3N1C2169.5°174.4°
C8C3C4C50.2°0.1°
C8C3N1H169.2°5.9°
C3C8C7H2179.9°179.7°
C8C3C4H6179.8°180.0°
C6C5C4C30.1°0.1°
C6C5C4H4180.0°179.9°
C5C6C7H2179.7°179.7°
C6C5C4H6179.9°180.0°
C3N1C2H1121.3°179.7°
N1C3C4C5174.2°180.0°
C3N1C2C1107.8°179.7°
N1C3C4H65.8°0.0°
C3N1C2H711.8°60.2°
C3N1C2H8132.6°59.7°
C4C3N1C24.8°5.6°
C3C4C5H6180.0°180.0°
C4C3N1H1116.5°174.1°
C3C4C5H4179.9°180.0°
N1C2C1H7119.6°120.0°
N1C2C1H8119.6°120.0°
N1C2C1O5.3°0.0°
N1C2C1N174.9°180.0°
N1C2H7H8121.2°120.0°
C4C5C6H5179.8°180.0°
C2C1ON179.9°180.0°
C2C1NC0.1°180.0°
C1C2N1H1130.8°0.0°
C1C2H7H8121.2°120.0°
C2C1NH12179.9°0.0°
OC1NC180.0°0.0°
OC1C2H7114.3°120.0°
OC1C2H8124.9°120.1°
OC1NH120.0°179.9°
C1NCH12180.0°179.9°
NC1C2H765.6°60.0°
NC1C2H855.3°60.0°
C1NCH13180.0°60.0°
C1NCH1460.0°180.0°
C1NCH1560.0°60.0°
NCH13H14120.0°120.1°
NCH13H15120.0°120.0°
NCH14H15120.0°120.0°
H1N1C2H7109.6°120.0°
H1N1C2H811.3°120.0°
H2C7C6H50.3°0.3°
H3N2C10H90.0°119.9°
H3N2C10H10120.0°0.0°
H3N2C10H11120.0°120.1°
H4C5C6H50.2°0.0°
H4C5C4H60.1°0.0°
H9C10H10H11120.0°120.0°
H12NCH130.0°120.0°
H12NCH14120.0°0.1°
H12NCH15120.0°120.1°
H13CH14H15120.0°119.9°

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PDB entries from 2024-09-11

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