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VB9

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
CNsing1.47Å1.51Å
SC8sing1.70Å1.64ÅAromatic
SC5sing1.76Å1.62ÅAromatic
OC4doub1.22Å1.27Å
C8C7doub1.33Å1.30ÅAromatic
C1Nsing1.47Å1.51Å
C4C5sing1.42Å1.44Å
C4N1sing1.35Å1.42Å
C5C6doub1.38Å1.36ÅAromatic
NC2sing1.47Å1.51Å
C2C3sing1.53Å1.54Å
C7C6sing1.39Å1.43ÅAromatic
C6N2sing1.40Å1.32Å
N1C3sing1.47Å1.43Å
N1C9sing1.34Å1.40Å
C9N2sing1.34Å1.28Å
C9S1doub1.71Å1.64Å
C7H1sing1.08Å1.08Å
C8H2sing1.08Å1.08Å
N2H3sing0.97Å1.00Å
C1H4sing1.09Å1.10Å
C1H5sing1.09Å1.10Å
C1H6sing1.09Å1.10Å
C3H7sing1.09Å1.10Å
C3H8sing1.09Å1.10Å
C2H9sing1.09Å1.10Å
C2H10sing1.09Å1.10Å
CH12sing1.09Å1.10Å
CH13sing1.09Å1.10Å
CH14sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
CNC1108.2°111.0°
CNC2112.3°111.0°
NCH12109.5°109.4°
NCH13109.5°109.5°
NCH14109.5°109.4°
C8SC597.3°91.8°
SC8C7110.6°111.3°
SC8H2124.7°124.4°
SC5C4129.2°131.4°
SC5C6107.4°109.3°
OC4C5131.3°120.2°
OC4N1119.4°120.2°
C8C7C6111.3°115.6°
C8C7H1124.3°122.2°
C7C8H2124.7°124.4°
C1NC2108.3°111.0°
NC1H4109.5°109.5°
NC1H5109.5°109.5°
NC1H6109.5°109.5°
C5C4N1109.2°119.6°
C4C5C6123.4°119.3°
C4N1C3118.1°119.6°
C4N1C9121.7°120.8°
C5C6C7113.4°112.1°
C5C6N2124.5°118.1°
NC2C3108.6°109.5°
NC2H9109.7°109.5°
NC2H10109.7°109.5°
C2C3N1110.5°109.5°
C2C3H7109.2°109.5°
C2C3H8109.2°109.5°
C3C2H9109.7°109.5°
C3C2H10109.7°109.5°
C7C6N2122.0°129.8°
C6C7H1124.3°122.2°
C6N2C9114.9°120.6°
C6N2H3122.5°119.7°
C3N1C9120.1°119.6°
N1C3H7109.2°109.5°
N1C3H8109.2°109.5°
N1C9N2126.1°121.7°
N1C9S1118.1°119.2°
N2C9S1115.7°119.2°
C9N2H3122.5°119.7°
H4C1H5109.5°109.4°
H4C1H6109.5°109.5°
H5C1H6109.5°109.5°
H7C3H8109.5°109.5°
H9C2H10109.5°109.5°
H12CH13109.4°109.5°
H12CH14109.5°109.5°
H13CH14109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
CNC1C2122.0°123.9°
CNC2C398.1°66.0°
CNC1H4180.0°176.0°
CNC1H560.0°56.1°
CNC1H660.0°63.9°
CNC2H9142.0°53.9°
CNC2H1021.7°174.0°
NCH12H13120.0°120.0°
NCH12H14120.0°120.0°
NCH13H14120.0°120.0°
SC8C7H2180.0°179.4°
C8SC5C4178.9°179.6°
C8SC5C60.9°0.0°
SC8C7C60.0°0.6°
SC8C7H1180.0°179.9°
SC5C4O8.2°0.4°
C5SC8C70.5°0.3°
SC5C4C6177.7°179.6°
SC5C4N1175.6°179.6°
SC5C6C71.0°0.3°
SC5C6N2177.1°180.0°
C5SC8H2179.5°179.8°
OC4C5N1176.2°180.0°
OC4C5C6174.1°180.0°
OC4N1C36.5°0.0°
OC4N1C9174.6°179.7°
C8C7C6C50.6°0.6°
C8C7C6H1180.0°179.5°
C8C7C6N2177.5°179.7°
C1NC2C3142.4°170.0°
NC1H4H5120.0°120.0°
NC1H4H6120.0°120.1°
NC1H5H6120.0°120.1°
C1NC2H922.5°70.0°
C1NC2H1097.7°50.0°
C1NCH12180.0°60.0°
C1NCH1360.0°180.0°
C1NCH1460.0°60.0°
C4C5C6C7179.1°180.0°
C4C5C6N21.0°0.3°
C5C4N1C3176.8°180.0°
C5C4N1C92.1°0.3°
N1C4C5C62.1°0.0°
C4N1C3C278.8°90.3°
C4N1C3C9178.9°179.7°
C4N1C9N21.2°0.3°
C4N1C9S1176.1°179.7°
C4N1C3H741.4°29.7°
C4N1C3H8161.1°149.7°
C5C6C7N2178.2°179.7°
C5C6N2C90.3°0.2°
C5C6C7H1179.4°179.9°
C5C6N2H3179.7°179.7°
NC2C3H9119.9°120.0°
NC2C3H10119.8°120.0°
NC2C3N1173.5°180.0°
C2NC1H458.0°60.0°
C2NC1H5178.0°180.0°
C2NC1H662.0°60.0°
NC2C3H753.4°60.0°
NC2C3H866.3°60.0°
NC2H9H10120.4°120.0°
C2NCH1260.5°176.1°
C2NCH1359.5°56.1°
C2NCH14179.5°63.9°
C2C3N1H7120.1°120.0°
C2C3N1H8120.2°120.0°
C2C3N1C9100.2°90.0°
C2C3H7H8119.6°120.0°
C3C2H9H10120.4°120.0°
C7C6N2C9177.7°179.9°
C6C7C8H2180.0°180.0°
C7C6N2H32.3°0.0°
C6N2C9N10.2°0.1°
C6N2C9H3180.0°179.9°
C6N2C9S1177.6°180.0°
N2C6C7H12.5°0.2°
C3N1C9N2177.7°180.0°
C3N1C9S15.0°0.0°
N1C3H7H8119.5°120.0°
N1C3C2H966.6°60.0°
N1C3C2H1053.7°60.0°
N1C9N2S1177.4°179.9°
N1C9N2H3179.8°180.0°
C9N1C3H7139.7°150.0°
C9N1C3H820.0°30.0°
S1C9N2H32.4°0.1°
H1C7C8H20.1°0.5°
H4C1H5H6120.0°119.9°
H7C3C2H9173.3°NaN°
H7C3C2H1066.4°60.0°
H8C3C2H953.6°59.9°
H8C3C2H10173.8°180.0°
H12CH13H14120.0°120.1°

222415

PDB entries from 2024-07-10

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