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VB1

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C32C33sing1.53Å1.54Å
C33CAVsing1.53Å1.55Å
CAVC31sing1.51Å1.57Å
CAVN29sing1.46Å1.46Å
C31O43sing1.34Å1.27Å
C31O42doub1.21Å1.27Å
N29C13sing1.35Å1.35Å
C13O18doub1.21Å1.22Å
C13C12sing1.51Å1.50Å
C12C16sing1.53Å1.54Å
C12N11sing1.46Å1.50Å
C16S17sing1.81Å1.85Å
N11C10sing1.35Å1.30Å
C10O15doub1.21Å1.23Å
C10C7sing1.51Å1.52Å
C7C4sing1.53Å1.53Å
C4C3sing1.53Å1.54Å
C3C2sing1.53Å1.55Å
C2C1sing1.51Å1.55Å
C2N14sing1.47Å1.49Å
C1O20doub1.21Å1.26Å
C1O19sing1.34Å1.26Å
C32H321sing1.09Å1.10Å
C32H322sing1.09Å1.10Å
C32H323sing1.09Å1.10Å
C33H331sing1.09Å1.10Å
C33H332sing1.09Å1.10Å
CAVHAVsing1.09Å1.10Å
N29H29sing0.97Å1.00Å
O43H43sing0.97Å0.95Å
C12H12sing1.09Å1.10Å
C16H161sing1.09Å1.10Å
C16H162sing1.09Å1.10Å
N11H11sing0.97Å1.00Å
S17H17sing1.34Å1.30Å
C7H7C1sing1.09Å1.10Å
C7H7C2sing1.09Å1.10Å
C4H4C1sing1.09Å1.10Å
C4H4C2sing1.09Å1.10Å
C3H3C1sing1.09Å1.10Å
C3H3C2sing1.09Å1.10Å
C2H2sing1.09Å1.10Å
N14H141sing1.01Å1.00Å
N14H142sing1.01Å1.00Å
O19H19sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C32C33CAV113.0°109.5°
C33C32H321109.5°109.5°
C33C32H322109.4°109.5°
C33C32H323109.5°109.5°
C32C33H331108.3°109.5°
C32C33H332107.5°109.5°
C33CAVC31117.3°109.5°
C33CAVN29110.8°109.5°
CAVC33H331108.3°109.5°
CAVC33H332107.5°109.5°
C33CAVHAV102.7°109.5°
C31CAVN29109.3°109.5°
CAVC31O43115.3°120.0°
CAVC31O42119.9°120.0°
C31CAVHAV104.5°109.5°
CAVN29C13120.9°120.0°
N29CAVHAV111.9°109.5°
CAVN29H29119.6°120.0°
O43C31O42124.7°120.0°
C31O43H43109.5°117.0°
N29C13O18123.2°120.0°
N29C13C12114.1°120.0°
C13N29H29119.6°120.0°
O18C13C12122.6°120.0°
C13C12C16107.4°109.5°
C13C12N11109.9°109.4°
C13C12H12110.2°109.5°
C16C12N11108.4°109.5°
C12C16S17114.1°109.4°
C16C12H12111.6°109.5°
C12C16H161108.0°109.5°
C12C16H162106.9°109.5°
C12N11C10119.8°120.0°
N11C12H12109.2°109.5°
C12N11H11120.1°120.0°
S17C16H161107.9°109.5°
S17C16H162106.9°109.5°
C16S17H17109.5°103.0°
N11C10O15120.2°120.0°
N11C10C7114.9°120.0°
C10N11H11120.1°120.0°
O15C10C7124.9°120.0°
C10C7C4109.6°109.5°
C10C7H7C1109.5°109.5°
C10C7H7C2109.4°109.5°
C7C4C3105.8°109.5°
C4C7H7C1109.4°109.4°
C4C7H7C2109.4°109.4°
C7C4H4C1110.7°109.4°
C7C4H4C2111.5°109.4°
C4C3C2110.2°109.5°
C3C4H4C1110.7°109.5°
C3C4H4C2111.5°109.5°
C4C3H3C1109.2°109.4°
C4C3H3C2109.1°109.5°
C3C2C1100.6°109.5°
C3C2N14112.0°109.5°
C2C3H3C1109.2°109.5°
C2C3H3C2109.1°109.5°
C3C2H2114.1°109.5°
C1C2N14110.9°109.5°
C2C1O20118.6°120.0°
C2C1O19113.3°120.0°
C1C2H2115.2°109.4°
N14C2H2104.4°109.5°
C2N14H141109.5°111.0°
C2N14H142109.4°111.0°
O20C1O19128.1°120.0°
C1O19H19109.5°117.0°
H321C32H322109.5°109.5°
H321C32H323109.5°109.5°
H322C32H323109.5°109.5°
H331C33H332112.3°109.5°
H161C16H162113.2°109.5°
H7C1C7H7C2109.5°109.5°
H4C1C4H4C2106.7°109.4°
H3C1C3H3C2110.0°109.5°
H141N14H142109.5°111.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C32C33CAVH331120.0°120.0°
C32C33CAVH332118.5°120.0°
C32C33CAVC31160.2°175.0°
C32C33CAVN2973.4°65.0°
C33C32H321H322120.0°120.0°
C33C32H321H323120.0°120.0°
C33C32H322H323120.0°120.0°
C32C33H331H332118.6°120.0°
C32C33CAVHAV46.3°55.0°
C33CAVC31N29127.1°120.0°
C33CAVC31HAV112.9°120.0°
C33CAVN29HAV114.0°120.0°
C33CAVC31O43131.6°60.0°
C33CAVC31O4252.1°120.0°
C33CAVN29C13116.7°155.0°
CAVC33C32H321169.4°60.0°
CAVC33C32H32270.7°180.0°
CAVC33C32H32349.4°60.0°
CAVC33H331H332118.5°120.0°
C33CAVN29H2963.2°25.0°
C31CAVN29HAV115.3°120.0°
CAVC31O43O42176.1°179.9°
C31CAVN29C13112.5°85.0°
C31CAVC33H33140.2°65.0°
C31CAVC33H33281.3°55.0°
C31CAVN29H2967.5°95.0°
CAVC31O43H43176.1°180.0°
N29CAVC31O434.5°180.0°
N29CAVC31O42179.3°0.0°
CAVN29C13H29180.0°180.0°
CAVN29C13O180.4°0.0°
CAVN29C13C12179.5°180.0°
N29CAVC33H331166.6°55.0°
N29CAVC33H33245.1°175.0°
O43C31CAVHAV115.4°60.0°
O42C31CAVHAV60.8°120.0°
O42C31O43H430.0°0.0°
N29C13O18C12179.1°179.9°
N29C13C12C1662.7°60.0°
N29C13C12N11179.5°180.0°
C13N29CAVHAV2.7°35.0°
N29C13C12H1259.1°60.0°
O18C13C12C16116.4°119.9°
O18C13C12N111.4°0.0°
O18C13N29H29179.7°179.9°
O18C13C12H12121.8°120.1°
C13C12C16N11118.7°119.9°
C13C12C16H12121.0°120.0°
C13C12N11H12121.0°120.0°
C13C12C16S1770.6°180.0°
C13C12N11C1084.9°155.0°
C12C13N29H290.5°0.0°
C13C12C16H16149.4°60.0°
C13C12C16H162171.5°60.0°
C13C12N11H1195.1°25.0°
C16C12N11H12121.8°120.0°
C12C16S17H161120.0°120.0°
C12C16S17H162117.9°120.0°
C16C12N11C10158.0°85.0°
C12C16H161H162118.1°120.0°
C16C12N11H1122.0°95.0°
C12C16S17H1710.5°180.0°
N11C12C16S1748.1°60.1°
C12N11C10H11180.0°180.0°
C12N11C10O153.9°0.1°
C12N11C10C7178.3°179.9°
N11C12C16H161168.1°59.9°
N11C12C16H16269.8°180.0°
S17C16C12H12168.4°60.0°
S17C16H161H162118.1°120.0°
N11C10O15C7177.5°179.9°
N11C10C7C4119.6°180.0°
C10N11C12H1236.1°35.0°
N11C10C7H7C10.4°60.1°
N11C10C7H7C2120.4°60.0°
O15C10C7C458.0°0.1°
O15C10N11H11176.1°180.0°
O15C10C7H7C1178.1°120.0°
O15C10C7H7C261.9°119.9°
C10C7C4H7C1120.0°120.0°
C10C7C4H7C2120.0°120.1°
C10C7C4C3176.8°180.0°
C7C10N11H111.7°0.1°
C10C7H7C1H7C2120.0°120.1°
C10C7C4H4C156.8°60.0°
C10C7C4H4C261.8°59.9°
C7C4C3H4C1120.0°120.0°
C7C4C3H4C2121.4°120.0°
C7C4C3C2179.9°180.0°
C4C7H7C1H7C2119.9°119.9°
C7C4H4C1H4C2121.5°119.9°
C7C4C3H3C159.9°60.0°
C7C4C3H3C260.4°60.0°
C4C3C2H3C1120.0°120.0°
C4C3C2H3C2119.7°120.0°
C4C3C2C1176.0°175.0°
C4C3C2N1458.2°65.0°
C3C4C7H7C163.2°60.0°
C3C4C7H7C256.8°60.0°
C3C4H4C1H4C2121.5°120.0°
C4C3H3C1H3C2119.7°120.0°
C4C3C2H260.1°55.1°
C3C2C1N14118.6°120.1°
C3C2C1H2123.2°120.0°
C3C2N14H2123.9°120.1°
C3C2C1O2070.0°100.0°
C3C2C1O19112.6°79.7°
C2C3C4H4C160.1°60.0°
C2C3C4H4C258.5°60.0°
C2C3H3C1H3C2119.7°120.1°
C3C2N14H141119.2°60.0°
C3C2N14H142120.7°64.0°
C1C2N14H2124.6°119.9°
C2C1O20O19177.0°179.7°
C1C2C3H3C164.0°65.1°
C1C2C3H3C256.3°55.0°
C1C2N14H141129.3°60.0°
C1C2N14H1429.3°176.0°
C2C1O19H19177.1°179.7°
N14C2C1O20171.4°20.1°
N14C2C1O195.9°160.2°
N14C2C3H3C1178.2°55.0°
N14C2C3H3C261.5°175.0°
C2N14H141H142120.0°123.9°
O20C1C2H253.2°140.0°
O20C1O19H190.0°0.0°
O19C1C2H2124.2°40.3°
H321C32H322H323120.0°120.0°
H321C32C33H33170.7°60.0°
H321C32C33H33250.9°180.0°
H322C32C33H33149.3°60.0°
H322C32C33H332170.9°60.0°
H323C32C33H331169.3°180.0°
H323C32C33H33269.1°60.0°
H331C33CAVHAV73.7°175.0°
H332C33CAVHAV164.7°65.0°
HAVCAVN29H29177.2°145.0°
H12C12C16H16171.6°NaN°
H12C12C16H16250.5°60.0°
H12C12N11H11143.8°145.0°
H161C16S17H17130.6°60.0°
H162C16S17H17107.4°60.0°
H7C1C7C4H4C1176.8°180.0°
H7C1C7C4H4C258.2°60.0°
H7C2C7C4H4C163.2°60.1°
H7C2C7C4H4C2178.2°180.0°
H4C1C4C3H3C1179.9°180.0°
H4C1C4C3H3C259.6°60.0°
H4C2C4C3H3C161.5°60.0°
H4C2C4C3H3C2178.3°180.0°
H3C1C3C2H259.9°175.0°
H3C2C3C2H2179.8°65.0°
H2C2N14H1414.7°180.0°
H2C2N14H142115.3°56.1°

248636

PDB entries from 2026-02-04

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