Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

VAY

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O31C1sing1.43Å1.42Å
O35S34doub1.42Å1.47Å
O33S34sing1.52Å1.50Å
O33C6sing1.43Å1.39Å
S34O36doub1.42Å1.47Å
S34N37sing1.66Å1.69Å
C1C5sing1.54Å1.57Å
C1C2sing1.54Å1.57Å
C5C6sing1.53Å1.53Å
C5C4sing1.55Å1.58Å
O32C2sing1.43Å1.42Å
C2C3sing1.54Å1.56Å
C3C4sing1.55Å1.57Å
C3N7sing1.47Å1.52Å
N9C10doub1.32Å1.34ÅAromatic
N9C8sing1.33Å1.35ÅAromatic
C10N11sing1.32Å1.35ÅAromatic
N7C8sing1.38Å1.35Å
C8C13doub1.41Å1.42ÅAromatic
N11C12doub1.32Å1.34ÅAromatic
C13C12sing1.40Å1.39ÅAromatic
C13C14sing1.48Å1.46Å
BR28C24sing1.89Å1.89Å
C14O16doub1.22Å1.23Å
C14C15sing1.46Å1.54Å
C24N23doub1.32Å1.34ÅAromatic
C24C25sing1.38Å1.40ÅAromatic
C15C20doub1.37Å1.36ÅAromatic
C15S17sing1.76Å1.68ÅAromatic
C20C19sing1.37Å1.40ÅAromatic
N23C22sing1.32Å1.33ÅAromatic
C25C26doub1.39Å1.40ÅAromatic
O30C21sing1.43Å1.38Å
C19C21sing1.51Å1.64Å
C19C18doub1.34Å1.36ÅAromatic
C22C21sing1.51Å1.51Å
C22C27doub1.38Å1.41ÅAromatic
S17C18sing1.71Å1.73ÅAromatic
C21C29sing1.53Å1.52Å
C26C27sing1.39Å1.39ÅAromatic
C4H1sing1.09Å1.10Å
C4H2sing1.09Å1.10Å
C5H3sing1.09Å1.10Å
C6H4sing1.09Å1.10Å
C6H5sing1.09Å1.10Å
C10H6sing1.08Å1.08Å
C20H7sing1.08Å1.08Å
C26H8sing1.08Å1.08Å
C27H9sing1.08Å1.08Å
C25H10sing1.08Å1.08Å
O30H11sing0.97Å0.95Å
C29H12sing1.09Å1.10Å
C29H13sing1.09Å1.10Å
C29H14sing1.09Å1.10Å
C18H15sing1.08Å1.08Å
C12H16sing1.08Å1.08Å
N7H17sing0.97Å1.00Å
C3H18sing1.09Å1.10Å
C2H19sing1.09Å1.10Å
O32H20sing0.97Å0.95Å
C1H21sing1.09Å1.10Å
O31H22sing0.97Å0.95Å
N37H23sing0.97Å1.00Å
N37H24sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O31C1C5103.8°110.0°
O31C1C2114.1°110.2°
O31C1H21112.1°110.1°
C1O31H22109.5°114.0°
O35S34O33106.7°106.4°
O35S34O36114.2°123.1°
O35S34N37109.5°106.4°
S34O33C6119.8°114.0°
O33S34O36106.8°106.4°
O33S34N37108.8°107.2°
O33C6C5113.3°109.5°
O33C6H4108.5°109.5°
O33C6H5108.5°109.5°
O36S34N37110.6°106.4°
S34N37H23109.5°120.0°
S34N37H24109.5°120.0°
C5C1C2106.6°106.5°
C1C5C6109.2°110.5°
C1C5C4103.0°104.2°
C1C5H3112.4°110.6°
C5C1H21110.0°110.0°
C1C2O32108.0°110.2°
C1C2C3104.4°106.6°
C1C2H19110.9°110.0°
C2C1H21109.9°110.0°
C6C5C4106.4°110.5°
C6C5H3112.9°110.4°
C5C6H4108.5°109.5°
C5C6H5108.5°109.4°
C5C4C3103.9°102.9°
C5C4H1110.9°110.8°
C5C4H2110.8°110.7°
C4C5H3112.2°110.5°
O32C2C3108.8°110.0°
O32C2H19113.2°110.0°
C2O32H20109.5°113.9°
C2C3C499.5°104.2°
C2C3N7111.6°110.5°
C2C3H18110.5°110.6°
C3C2H19111.1°110.1°
C4C3N7113.3°110.5°
C3C4H1110.8°110.8°
C3C4H2110.8°110.8°
C4C3H18110.4°110.5°
C3N7C8124.6°120.0°
C3N7H17105.6°120.0°
N7C3H18111.0°110.5°
C10N9C8121.5°120.8°
N9C10N11122.2°122.2°
N9C10H6118.9°118.9°
N9C8N7123.1°120.6°
N9C8C13115.8°118.7°
C10N11C12121.0°121.2°
N11C10H6118.9°118.9°
N7C8C13121.2°120.6°
C8N7H17105.6°120.1°
C8C13C12122.6°118.0°
C8C13C14119.2°121.0°
N11C12C13117.0°119.0°
N11C12H16121.5°120.5°
C12C13C14118.1°121.0°
C13C12H16121.5°120.5°
C13C14O16117.5°120.0°
C13C14C15123.7°120.0°
BR28C24N23117.5°119.7°
BR28C24C25121.0°119.6°
O16C14C15118.6°120.0°
C14C15C20133.9°125.5°
C14C15S17114.9°125.5°
N23C24C25121.5°120.7°
C24N23C22120.0°121.7°
C24C25C26119.7°119.2°
C24C25H10120.2°120.4°
C20C15S17111.0°109.1°
C15C20C19113.7°113.3°
C15C20H7123.1°123.3°
C15S17C1892.9°91.6°
C20C19C21125.8°122.4°
C20C19C18112.8°115.1°
C19C20H7123.2°123.4°
N23C22C21116.6°119.6°
N23C22C27121.2°120.8°
C25C26C27117.7°118.4°
C25C26H8121.2°120.8°
C26C25H10120.1°120.4°
O30C21C1988.2°109.5°
O30C21C22122.1°109.5°
O30C21C29120.0°109.5°
C21O30H11109.5°114.0°
C21C19C18121.4°122.5°
C19C21C2290.5°109.5°
C19C21C2998.2°109.5°
C19C18S17109.5°111.0°
C19C18H15125.2°124.5°
C21C22C27122.2°119.6°
C22C21C29117.4°109.4°
C22C27C26119.9°119.2°
C22C27H9120.1°120.4°
S17C18H15125.2°124.5°
C21C29H12109.5°109.4°
C21C29H13109.5°109.4°
C21C29H14109.4°109.5°
C27C26H8121.1°120.8°
C26C27H9120.0°120.4°
H1C4H2109.5°110.7°
H4C6H5109.5°109.4°
H12C29H13109.5°109.5°
H12C29H14109.5°109.5°
H13C29H14109.4°109.5°
H23N37H24109.5°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O31C1C5C2120.8°119.4°
O31C1C5H21120.1°121.4°
O31C1C2H21126.9°121.5°
O31C1C5C6119.8°98.4°
O31C1C5C4127.4°142.9°
O31C1C2O3224.3°0.0°
O31C1C2C391.4°119.3°
O31C1C5H36.4°24.1°
O31C1C2H19148.8°121.5°
O35S34O33O36122.5°132.9°
O35S34O33N37118.1°113.6°
O35S34O33C6173.8°171.4°
O35S34O36N37124.1°123.0°
O35S34N37H23180.0°113.5°
O35S34N37H2460.0°66.5°
O33S34O36N37118.2°114.1°
S34O33C6C5150.0°180.0°
S34O33C6H489.4°60.0°
S34O33C6H529.4°60.0°
O33S34N37H2363.7°0.0°
O33S34N37H2456.4°180.0°
C6O33S34O3663.6°38.6°
C6O33S34N3755.7°75.0°
O33C6C5C166.7°178.7°
O33C6C5H4120.6°120.1°
O33C6C5H5120.6°120.1°
O33C6C5C4177.2°66.4°
O33C6C5H359.2°56.1°
O33C6H4H5118.3°120.0°
O36S34N37H2353.3°113.6°
O36S34N37H24173.3°66.4°
S34N37H23H24120.0°180.0°
C5C1C2H21119.1°119.1°
C1C5C6C4110.5°114.8°
C1C5C6H3125.9°122.6°
C1C5C4H3121.1°118.8°
C5C1C2O32138.2°119.3°
C5C1C2C322.5°0.1°
C1C5C4C333.4°37.8°
C1C5C4H1152.5°156.3°
C1C5C4H285.7°80.6°
C1C5C6H4172.8°58.7°
C1C5C6H553.9°61.2°
C5C1C2H1997.2°119.2°
C5C1O31H22180.0°180.0°
C2C1C5C6119.4°142.2°
C2C1C5C46.6°23.5°
C1C2O32C3112.8°117.2°
C1C2O32H19123.2°121.4°
C1C2C3H19119.6°119.2°
C1C2C3C442.3°23.6°
C1C2C3N7162.1°142.2°
C2C1C5H3114.4°95.3°
C1C2C3H1873.8°95.1°
C1C2O32H20180.0°62.8°
C2C1O31H2264.4°62.8°
C6C5C4H3124.0°122.5°
C6C5C4C3148.2°156.6°
C6C5C4H192.7°85.0°
C6C5C4H229.1°38.1°
C5C6H4H5118.2°119.9°
C6C5C1H210.3°23.0°
C5C4C3C247.0°37.9°
C5C4C3H1119.1°118.4°
C5C4C3H2119.1°118.4°
C5C4C3N7165.6°156.5°
C5C4H1H2122.6°123.2°
C4C5C6H462.2°173.5°
C4C5C6H556.6°53.6°
C5C4C3H1869.1°80.9°
C4C5C1H21112.5°95.7°
O32C2C3H19125.3°121.4°
O32C2C3C4157.4°143.0°
O32C2C3N782.7°98.4°
O32C2C3H1841.4°24.3°
O32C2C1H21102.6°121.5°
C2C3C4N7118.6°118.6°
C2C3C4H18116.2°118.8°
C2C3N7H18123.8°122.7°
C2C3N7C8140.0°90.3°
C2C3C4H1166.1°156.3°
C2C3C4H272.1°80.5°
C2C3N7H1798.0°89.7°
C3C2O32H2067.2°180.0°
C3C2C1H21141.7°119.2°
C4C3N7H18124.9°122.5°
C4C3N7C8108.7°155.0°
C3C4H1H2122.6°123.3°
C3C4C5H387.8°81.0°
C4C3N7H1713.3°25.0°
C4C3C2H1977.3°95.7°
C3N7C8N92.7°5.3°
C3N7C8H17122.0°179.9°
C3N7C8C13176.8°175.0°
N7C3C4H175.3°85.1°
N7C3C4H246.5°38.1°
N7C3C2H1942.6°23.0°
N9C10N11H6180.0°179.9°
C10N9C8N7179.1°179.7°
C10N9C8C130.5°0.1°
N9C10N11C120.1°0.1°
C8N9C10N110.5°0.1°
N9C8N7C13179.5°179.6°
N9C8C13C120.1°0.1°
N9C8C13C14178.4°179.9°
C8N9C10H6179.5°180.0°
N9C8N7H17124.8°174.7°
C10N11C12C130.2°0.1°
C10N11C12H16179.8°179.9°
N7C8C13C12179.4°179.7°
N7C8C13C141.1°0.3°
C8N7C3H1816.2°32.4°
C8C13C12N110.2°0.0°
C8C13C12C14178.3°180.0°
C8C13C14O1634.6°104.3°
C8C13C14C15150.9°75.6°
C8C13C12H16179.8°180.0°
C13C8N7H1754.7°4.9°
N11C12C13H16180.0°180.0°
N11C12C13C14178.1°180.0°
C12N11C10H6179.9°180.0°
C12C13C14O16143.8°75.7°
C12C13C14C1530.7°104.4°
C13C14O16C15174.8°179.9°
C13C14C15C2027.8°175.7°
C13C14C15S17156.3°4.0°
C14C13C12H161.9°0.0°
BR28C24N23C25180.0°180.0°
BR28C24N23C22178.6°180.0°
BR28C24C25C26179.8°179.8°
BR28C24C25H100.2°0.0°
O16C14C15C20157.8°4.4°
O16C14C15S1718.1°176.0°
C14C15C20S17176.0°179.7°
C14C15C20C19178.4°179.7°
C14C15S17C18178.8°179.7°
C14C15C20H71.6°0.3°
N23C24C25C260.2°0.2°
C24N23C22C21179.2°180.0°
C24N23C22C272.4°0.2°
N23C24C25H10179.8°180.0°
C25C24N23C221.4°0.0°
C24C25C26H10180.0°179.8°
C24C25C26C270.0°0.2°
C24C25C26H8180.0°179.7°
C15C20C19H7180.0°180.0°
C15C20C19C21179.6°180.0°
C15C20C19C181.5°0.0°
C20C15S17C182.0°0.0°
S17C15C20C192.4°0.0°
C15S17C18C191.2°0.0°
S17C15C20H7177.6°180.0°
C15S17C18H15178.8°180.0°
C20C19C21O3028.4°172.8°
C20C19C21C18178.7°180.0°
C20C19C21C2293.7°67.2°
C20C19C18S170.0°0.0°
C20C19C21C29148.5°52.8°
C20C19C18H15180.0°180.0°
N23C22C21O3016.9°125.2°
N23C22C21C19105.1°5.2°
N23C22C21C27176.8°179.8°
N23C22C21C29155.4°114.8°
N23C22C27C262.2°0.2°
N23C22C27H9177.8°179.7°
C25C26C27C221.0°0.0°
C25C26C27H8180.0°179.9°
C25C26C27H9179.0°180.0°
O30C21C19C22122.1°120.0°
O30C21C19C29120.1°120.0°
O30C21C19C18152.9°7.2°
O30C21C22C29172.2°120.0°
O30C21C22C27166.3°55.0°
O30C21C29H12180.0°60.0°
O30C21C29H1360.0°60.0°
O30C21C29H1460.0°180.0°
C19C21C22C2999.6°120.0°
C19C21C22C2778.1°175.0°
C21C19C18S17178.9°180.0°
C21C19C20H70.4°0.0°
C19C21O30H11180.0°60.0°
C19C21C29H1287.3°180.0°
C19C21C29H13152.7°60.0°
C19C21C29H1432.7°60.0°
C21C19C18H151.1°0.0°
C18C19C21C2285.1°112.8°
C19C18S17H15180.0°180.0°
C18C19C21C2932.8°127.2°
C18C19C20H7178.5°180.0°
C21C22C27C26178.9°180.0°
C21C22C27H91.1°0.0°
C22C21O30H1190.5°60.0°
C22C21C29H127.6°60.0°
C22C21C29H13112.4°180.0°
C22C21C29H14127.6°60.0°
C27C22C21C2921.4°65.0°
C22C27C26H9180.0°180.0°
C22C27C26H8179.0°179.9°
C29C21O30H1181.5°180.0°
C21C29H12H13120.0°120.0°
C21C29H12H14120.0°120.0°
C21C29H13H14120.0°120.0°
C27C26C25H10180.0°180.0°
H1C4C5H331.3°37.5°
H1C4C3H1850.0°37.5°
H2C4C5H3153.1°160.6°
H2C4C3H18171.7°160.7°
H3C5C6H461.4°63.9°
H3C5C6H5179.8°176.2°
H3C5C1H21126.5°145.5°
H8C26C27H91.0°0.0°
H8C26C25H100.0°0.1°
H12C29H13H14120.0°120.0°
H17N7C3H18138.2°147.5°
H18C3C2H19166.6°145.6°
H19C2O32H2056.8°58.6°
H19C2C1H2121.9°0.1°
H21C1O31H2261.4°58.7°

223790

PDB entries from 2024-08-14

PDB statisticsPDBj update infoContact PDBjnumon